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Volumn 170, Issue , 2014, Pages 522-529

Metabolomic and network analysis of astaxanthin-producing Haematococcus pluvialis under various stress conditions

Author keywords

Astaxanthin; Haematococcus pluvialis; Metabolic network; Metabolomics; Stress

Indexed keywords

BIOTECHNOLOGY; ENVIRONMENTAL ENGINEERING; STRESSES; METABOLITES;

EID: 84906505469     PISSN: 09608524     EISSN: 18732976     Source Type: Journal    
DOI: 10.1016/j.biortech.2014.08.018     Document Type: Article
Times cited : (95)

References (35)
  • 1
    • 33645000533 scopus 로고    scopus 로고
    • Metabolite profiling of Chlamydomonas reinhardtii under nutrient deprivation
    • Bölling C., Fiehn O. Metabolite profiling of Chlamydomonas reinhardtii under nutrient deprivation. Plant Physiol. 2005, 139:1995-2005.
    • (2005) Plant Physiol. , vol.139 , pp. 1995-2005
    • Bölling, C.1    Fiehn, O.2
  • 2
    • 64049094359 scopus 로고    scopus 로고
    • Escherichia coli O157: H7 glutamate-and arginine-dependent acid-resistance systems protect against oxidative stress during extreme acid challenge
    • Bearson B.L., Lee I.S., Casey T.A. Escherichia coli O157: H7 glutamate-and arginine-dependent acid-resistance systems protect against oxidative stress during extreme acid challenge. Microbiology 2009, 155:805-812.
    • (2009) Microbiology , vol.155 , pp. 805-812
    • Bearson, B.L.1    Lee, I.S.2    Casey, T.A.3
  • 3
    • 79956090481 scopus 로고    scopus 로고
    • An LC-MS-based chemical and analytical method for targeted metabolite quantification in the model Cyanobacterium Synechococcus sp. PCC 7002
    • Bennette N.B., Eng J.F., Dismukes G.C. An LC-MS-based chemical and analytical method for targeted metabolite quantification in the model Cyanobacterium Synechococcus sp. PCC 7002. Anal. Chem. 2011, 83:3808-3816.
    • (2011) Anal. Chem. , vol.83 , pp. 3808-3816
    • Bennette, N.B.1    Eng, J.F.2    Dismukes, G.C.3
  • 4
    • 84887992878 scopus 로고    scopus 로고
    • How metabolomics can contribute to bio-processes: a proof of concept study for biomarkers discovery in the context of nitrogen-starved microalgae grown in photobioreactors
    • Courant F., Martzolff A., Rabin G., Antignac J.-P., Le Bizec B., Giraudeau P., Tea I., Akoka S., Couzinet A., Cogne G. How metabolomics can contribute to bio-processes: a proof of concept study for biomarkers discovery in the context of nitrogen-starved microalgae grown in photobioreactors. Metabolomics 2013, 9:1286-1300.
    • (2013) Metabolomics , vol.9 , pp. 1286-1300
    • Courant, F.1    Martzolff, A.2    Rabin, G.3    Antignac, J.-P.4    Le Bizec, B.5    Giraudeau, P.6    Tea, I.7    Akoka, S.8    Couzinet, A.9    Cogne, G.10
  • 5
    • 0001505802 scopus 로고
    • Glycerol kinase: synthesis of dihydroxyacetone phosphate, sn-glycerol-3-phosphate, and chiral analogs
    • Crans D.C., Whitesides G.M. Glycerol kinase: synthesis of dihydroxyacetone phosphate, sn-glycerol-3-phosphate, and chiral analogs. J. Am. Chem. Soc. 1985, 107:7019-7027.
    • (1985) J. Am. Chem. Soc. , vol.107 , pp. 7019-7027
    • Crans, D.C.1    Whitesides, G.M.2
  • 7
    • 84855850930 scopus 로고    scopus 로고
    • Metabolite profiling of the moss Physcomitrella patens reveals evolutionary conservation of osmoprotective substances
    • Erxleben A., Gessler A., Vervliet-Scheebaum M., Reski R. Metabolite profiling of the moss Physcomitrella patens reveals evolutionary conservation of osmoprotective substances. Plant Cell Rep. 2012, 31:427-436.
    • (2012) Plant Cell Rep. , vol.31 , pp. 427-436
    • Erxleben, A.1    Gessler, A.2    Vervliet-Scheebaum, M.3    Reski, R.4
  • 8
    • 84934439896 scopus 로고    scopus 로고
    • Extraction protocol for nontargeted NMR and LC-MS metabolomics-based analysis of hard coral and their algal symbionts
    • Gordon B.R., Leggat W., Motti C.A. Extraction protocol for nontargeted NMR and LC-MS metabolomics-based analysis of hard coral and their algal symbionts. Meth. Mol. Biol. 2013, 1055:129-147.
    • (2013) Meth. Mol. Biol. , vol.1055 , pp. 129-147
    • Gordon, B.R.1    Leggat, W.2    Motti, C.A.3
  • 9
    • 58749101201 scopus 로고    scopus 로고
    • Time-and media-dependent secondary carotenoid accumulation in Haematococcus pluvialis
    • Grewe C., Griehl C. Time-and media-dependent secondary carotenoid accumulation in Haematococcus pluvialis. Biotechnol. J. 2008, 3:1232-1244.
    • (2008) Biotechnol. J. , vol.3 , pp. 1232-1244
    • Grewe, C.1    Griehl, C.2
  • 10
    • 70449567420 scopus 로고    scopus 로고
    • Determination of astaxanthin and astaxanthin esters in the microalgae Haematococcus pluvialis by LC-(APCI) MS and characterization of predominant carotenoid isomers by NMR spectroscopy
    • Holtin K., Kuehnle M., Rehbein J., Schuler P., Nicholson G., Albert K. Determination of astaxanthin and astaxanthin esters in the microalgae Haematococcus pluvialis by LC-(APCI) MS and characterization of predominant carotenoid isomers by NMR spectroscopy. Anal. Bioanal. Chem. 2009, 395:1613-1622.
    • (2009) Anal. Bioanal. Chem. , vol.395 , pp. 1613-1622
    • Holtin, K.1    Kuehnle, M.2    Rehbein, J.3    Schuler, P.4    Nicholson, G.5    Albert, K.6
  • 11
    • 71749103614 scopus 로고    scopus 로고
    • Influences of different stress media and high light intensities on accumulation of astaxanthin in the green alga Haematococcus pluvialis
    • Imamoglu E., Dalay M.C., Sukan F.V. Influences of different stress media and high light intensities on accumulation of astaxanthin in the green alga Haematococcus pluvialis. New Biotechnol. 2009, 26:199-204.
    • (2009) New Biotechnol. , vol.26 , pp. 199-204
    • Imamoglu, E.1    Dalay, M.C.2    Sukan, F.V.3
  • 12
    • 64149091633 scopus 로고    scopus 로고
    • Omics in algae: paving the way for a systems biological understanding of algal stress phenomena?
    • Jamers A., Blust R., De Coen W. Omics in algae: paving the way for a systems biological understanding of algal stress phenomena?. Aquat. Toxicol. 2009, 92:114-121.
    • (2009) Aquat. Toxicol. , vol.92 , pp. 114-121
    • Jamers, A.1    Blust, R.2    De Coen, W.3
  • 13
    • 0027513039 scopus 로고
    • Enhanced carotenoid biosynthesis by oxidative stress in acetate-induced cyst cells of a green unicellular alga, Haematococcus pluvialis
    • Kobayashi M., Kakizono T., Nagai S. Enhanced carotenoid biosynthesis by oxidative stress in acetate-induced cyst cells of a green unicellular alga, Haematococcus pluvialis. Appl. Environ. Microbiol. 1993, 59:867-873.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 867-873
    • Kobayashi, M.1    Kakizono, T.2    Nagai, S.3
  • 14
    • 84867280830 scopus 로고    scopus 로고
    • Chlorophyll a and NADPH fluorescence lifetimes in the microalgae Haematococcus pluvialis (Chlorophyceae) under normal and astaxanthin-accumulating conditions
    • Kristoffersen A.S., Svensen Ø., Ssebiyonga N., Erga S.R., Stamnes J.J., Frette Ø. Chlorophyll a and NADPH fluorescence lifetimes in the microalgae Haematococcus pluvialis (Chlorophyceae) under normal and astaxanthin-accumulating conditions. Appl. Spect. 2012, 66:1216-1225.
    • (2012) Appl. Spect. , vol.66 , pp. 1216-1225
    • Kristoffersen, A.S.1    Svensen, Ø.2    Ssebiyonga, N.3    Erga, S.R.4    Stamnes, J.J.5    Frette, Ø.6
  • 15
    • 0037795745 scopus 로고    scopus 로고
    • The oxidative pentose phosphate pathway: structure and organisation
    • Kruger N.J., von Schaewen A. The oxidative pentose phosphate pathway: structure and organisation. Curr. Opin. Plant Biol. 2003, 6:236-246.
    • (2003) Curr. Opin. Plant Biol. , vol.6 , pp. 236-246
    • Kruger, N.J.1    von Schaewen, A.2
  • 16
    • 78650230609 scopus 로고    scopus 로고
    • Secondary ketocarotenoid astaxanthin biosynthesis in algae: a multifunctional response to stress
    • Lemoine Y., Schoefs B. Secondary ketocarotenoid astaxanthin biosynthesis in algae: a multifunctional response to stress. Photosyn. Res. 2010, 106:155-177.
    • (2010) Photosyn. Res. , vol.106 , pp. 155-177
    • Lemoine, Y.1    Schoefs, B.2
  • 17
    • 85015514940 scopus 로고    scopus 로고
    • Metabolomic approach for assessing the mode of action of bioactive compounds on the green algae Pseudokirchneriella subcapitata
    • Niino T., Harada T., Houjou T., Yamada S., Oonishi K., Sato Y., Saito H. Metabolomic approach for assessing the mode of action of bioactive compounds on the green algae Pseudokirchneriella subcapitata. Jap. J. Environ. Toxicol. 2008, 11:83-89.
    • (2008) Jap. J. Environ. Toxicol. , vol.11 , pp. 83-89
    • Niino, T.1    Harada, T.2    Houjou, T.3    Yamada, S.4    Oonishi, K.5    Sato, Y.6    Saito, H.7
  • 18
    • 79951924823 scopus 로고    scopus 로고
    • Determination of the intracellular concentrations of metabolites in Escherichia coli collected during the exponential and stationary growth phases using liquid chromatography-mass spectrometry
    • Park C., Lee Y.-J., Lee S.Y., Oh H.B., Lee J. Determination of the intracellular concentrations of metabolites in Escherichia coli collected during the exponential and stationary growth phases using liquid chromatography-mass spectrometry. Bull Korean Chem. Soc. 2011, 32:524-530.
    • (2011) Bull Korean Chem. Soc. , vol.32 , pp. 524-530
    • Park, C.1    Lee, Y.-J.2    Lee, S.Y.3    Oh, H.B.4    Lee, J.5
  • 19
    • 22744439567 scopus 로고    scopus 로고
    • The evolution of connectivity in metabolic networks
    • Pfeiffer T., Soyer O.S., Bonhoeffer S. The evolution of connectivity in metabolic networks. PLoS Biol. 2005, 3:e228.
    • (2005) PLoS Biol. , vol.3
    • Pfeiffer, T.1    Soyer, O.S.2    Bonhoeffer, S.3
  • 21
    • 84901001414 scopus 로고    scopus 로고
    • Overexpression of plastidial thioredoxins f and m differentially alters photosynthetic activity and response to oxidative stress in tobacco plants
    • Rey P., Sanz-Barrio R., Innocenti G., Ksas B., Courteille A., Rumeau D., Issakidis-Bourguet E., Farran I. Overexpression of plastidial thioredoxins f and m differentially alters photosynthetic activity and response to oxidative stress in tobacco plants. Front. Plant Sci. 2013, 4:390.
    • (2013) Front. Plant Sci. , vol.4 , pp. 390
    • Rey, P.1    Sanz-Barrio, R.2    Innocenti, G.3    Ksas, B.4    Courteille, A.5    Rumeau, D.6    Issakidis-Bourguet, E.7    Farran, I.8
  • 22
    • 0035105106 scopus 로고    scopus 로고
    • Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems
    • Roessner U., Luedemann A., Brust D., Fiehn O., Linke T., Willmitzer L., Fernie A.R. Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems. Plant Cell 2001, 13:11-29.
    • (2001) Plant Cell , vol.13 , pp. 11-29
    • Roessner, U.1    Luedemann, A.2    Brust, D.3    Fiehn, O.4    Linke, T.5    Willmitzer, L.6    Fernie, A.R.7
  • 23
    • 84869868891 scopus 로고    scopus 로고
    • Effect of various stress-regulatory factors on biomass and lipid production in microalga Haematococcus pluvialis
    • Saha S.K., McHugh E., Hayes J., Moane S., Walsh D., Murray P. Effect of various stress-regulatory factors on biomass and lipid production in microalga Haematococcus pluvialis. Bioresour. Technol. 2012, 128:118-124.
    • (2012) Bioresour. Technol. , vol.128 , pp. 118-124
    • Saha, S.K.1    McHugh, E.2    Hayes, J.3    Moane, S.4    Walsh, D.5    Murray, P.6
  • 24
    • 50349083752 scopus 로고    scopus 로고
    • Enhancement of carotenoids by mutation and stress induced carotenogenic genes in Haematococcus pluvialis mutants
    • Sandesh Kamath B., Vidhyavathi R., Sarada R., Ravishankar G. Enhancement of carotenoids by mutation and stress induced carotenogenic genes in Haematococcus pluvialis mutants. Bioresour. Technol. 2008, 99:8667-8673.
    • (2008) Bioresour. Technol. , vol.99 , pp. 8667-8673
    • Sandesh Kamath, B.1    Vidhyavathi, R.2    Sarada, R.3    Ravishankar, G.4
  • 25
    • 0020432934 scopus 로고
    • C-11 labeled palmitic acid for the noninvasive evaluation of regional myocardial fatty acid metabolism with positron-computed tomography: I. Kinetics of C-11 palmitic acid in normal myocardium
    • Schön H.R., Schelbert H.R., Robinson G., Najafi A., Huang S.-C., Hansen H., Barrio J., Kuhl D.E., Phelps M.E. C-11 labeled palmitic acid for the noninvasive evaluation of regional myocardial fatty acid metabolism with positron-computed tomography: I. Kinetics of C-11 palmitic acid in normal myocardium. Am. Heart J. 1982, 103:532-547.
    • (1982) Am. Heart J. , vol.103 , pp. 532-547
    • Schön, H.R.1    Schelbert, H.R.2    Robinson, G.3    Najafi, A.4    Huang, S.-C.5    Hansen, H.6    Barrio, J.7    Kuhl, D.E.8    Phelps, M.E.9
  • 26
    • 0035816445 scopus 로고    scopus 로고
    • Astaxanthin accumulation in Haematococcus requires a cytochrome P450 hydroxylase and an active synthesis of fatty acids
    • Schoefs B.T., Rmiki N.-E., Rachadi J., Lemoine Y. Astaxanthin accumulation in Haematococcus requires a cytochrome P450 hydroxylase and an active synthesis of fatty acids. FEBS Lett. 2001, 500:125-128.
    • (2001) FEBS Lett. , vol.500 , pp. 125-128
    • Schoefs, B.T.1    Rmiki, N.-E.2    Rachadi, J.3    Lemoine, Y.4
  • 27
    • 85016502347 scopus 로고    scopus 로고
    • Recent applications of metabolomics toward cyanobacteria
    • Schwarz D., Orf I., Kopka J., Hagemann M. Recent applications of metabolomics toward cyanobacteria. Metabolites 2013, 3:72-100.
    • (2013) Metabolites , vol.3 , pp. 72-100
    • Schwarz, D.1    Orf, I.2    Kopka, J.3    Hagemann, M.4
  • 28
    • 0037898832 scopus 로고    scopus 로고
    • Light induction of carotenoid biosynthesis genes in the green alga Haematococcus pluvialis: regulation by photosynthetic redox control
    • Steinbrenner J., Linden H. Light induction of carotenoid biosynthesis genes in the green alga Haematococcus pluvialis: regulation by photosynthetic redox control. Plant Mol. Biol. 2003, 52:343-356.
    • (2003) Plant Mol. Biol. , vol.52 , pp. 343-356
    • Steinbrenner, J.1    Linden, H.2
  • 29
    • 33845546367 scopus 로고    scopus 로고
    • Transformation of the green alga Haematococcus pluvialis with a phytoene desaturase for accelerated astaxanthin biosynthesis
    • Steinbrenner J., Sandmann G. Transformation of the green alga Haematococcus pluvialis with a phytoene desaturase for accelerated astaxanthin biosynthesis. Appl. Environ. Microbiol. 2006, 72:7477-7484.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 7477-7484
    • Steinbrenner, J.1    Sandmann, G.2
  • 30
    • 45549101487 scopus 로고    scopus 로고
    • Regulation of carotenoid biosynthetic genes expression and carotenoid accumulation in the green alga Haematococcus pluvialis under nutrient stress conditions
    • Vidhyavathi R., Venkatachalam L., Sarada R., Ravishankar G.A. Regulation of carotenoid biosynthetic genes expression and carotenoid accumulation in the green alga Haematococcus pluvialis under nutrient stress conditions. J. Exp. Bot. 2008, 59:1409-1418.
    • (2008) J. Exp. Bot. , vol.59 , pp. 1409-1418
    • Vidhyavathi, R.1    Venkatachalam, L.2    Sarada, R.3    Ravishankar, G.A.4
  • 31
    • 67349245926 scopus 로고    scopus 로고
    • Occurrence and environmental stress responses of two plastid terminal oxidases in Haematococcus pluvialis (Chlorophyceae)
    • Wang J., Sommerfeld M., Hu Q. Occurrence and environmental stress responses of two plastid terminal oxidases in Haematococcus pluvialis (Chlorophyceae). Planta 2009, 230:191-203.
    • (2009) Planta , vol.230 , pp. 191-203
    • Wang, J.1    Sommerfeld, M.2    Hu, Q.3
  • 32
    • 84903378129 scopus 로고    scopus 로고
    • Metabolomic analysis of the salt-sensitive mutants reveals changes in amino acid and fatty acid composition important to long-term salt stress in Synechocystis sp. PCC 6803
    • Wang J., Zhang X., Shi M., Gao L., Niu X., Te R., Chen L., Zhang W. Metabolomic analysis of the salt-sensitive mutants reveals changes in amino acid and fatty acid composition important to long-term salt stress in Synechocystis sp. PCC 6803. Funct. Integr. Genomics. 2014, 14:431-440.
    • (2014) Funct. Integr. Genomics. , vol.14 , pp. 431-440
    • Wang, J.1    Zhang, X.2    Shi, M.3    Gao, L.4    Niu, X.5    Te, R.6    Chen, L.7    Zhang, W.8
  • 33
    • 11144320702 scopus 로고    scopus 로고
    • Proteomic analysis of molecular response to oxidative stress by the green alga Haematococcus pluvialis (Chlorophyceae)
    • Wang S.B., Chen F., Sommerfeld M., Hu Q. Proteomic analysis of molecular response to oxidative stress by the green alga Haematococcus pluvialis (Chlorophyceae). Planta 2004, 220:17-29.
    • (2004) Planta , vol.220 , pp. 17-29
    • Wang, S.B.1    Chen, F.2    Sommerfeld, M.3    Hu, Q.4
  • 34
    • 23944458138 scopus 로고    scopus 로고
    • A general framework for weighted gene co-expression network analysis
    • Zhang B., Horvath S. A general framework for weighted gene co-expression network analysis. Statist. Appl. Genetics Mol. Biol. 2005, 4:1128.
    • (2005) Statist. Appl. Genetics Mol. Biol. , vol.4 , pp. 1128
    • Zhang, B.1    Horvath, S.2
  • 35
    • 84889027562 scopus 로고    scopus 로고
    • NMR-based metabolomics and LC-MS/MS quantification reveal metal-specific tolerance and redox homeostasis in Chlorella vulgaris
    • Zhang W., Tan N.G., Li S.F. NMR-based metabolomics and LC-MS/MS quantification reveal metal-specific tolerance and redox homeostasis in Chlorella vulgaris. Mol. Biosyst. 2014, 10:149-160.
    • (2014) Mol. Biosyst. , vol.10 , pp. 149-160
    • Zhang, W.1    Tan, N.G.2    Li, S.F.3


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