-
2
-
-
49649087440
-
Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome
-
Urich T, Lanzen A, Qi J, Huson DH, Schleper C, Schuster SC. 2008. Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome. PLoS One 3:e2527. http://dx.doi.org/10.1371/journal.pone.0002527.
-
(2008)
PLoS One
, vol.3
-
-
Urich, T.1
Lanzen, A.2
Qi, J.3
Huson, D.H.4
Schleper, C.5
Schuster, S.C.6
-
3
-
-
77957689489
-
Validation of two ribosomal RNA removal methods for microbial metatranscriptomics
-
He S, Wurtzel O, Singh K, Froula JL, Yilmaz S, Tringe SG, Wang Z, Chen F, Lindquist EA, Sorek R, Hugenholtz P. 2010. Validation of two ribosomal RNA removal methods for microbial metatranscriptomics. Nat. Methods 7:807-812. http://dx.doi.org/10.1038/nmeth.1507.
-
(2010)
Nat. Methods
, vol.7
, pp. 807-812
-
-
He, S.1
Wurtzel, O.2
Singh, K.3
Froula, J.L.4
Yilmaz, S.5
Tringe, S.G.6
Wang, Z.7
Chen, F.8
Lindquist, E.A.9
Sorek, R.10
Hugenholtz, P.11
-
4
-
-
72849114230
-
Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity
-
Sorek R, Cossart P. 2010. Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity. Nat. Rev. Genet. 11:9-16. http: //dx.doi.org/10.1038/nrg2695.
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 9-16
-
-
Sorek, R.1
Cossart, P.2
-
5
-
-
80455168272
-
Duplex-specific nuclease efficiently removes rRNA for prokaryotic RNA-seq
-
Yi H, Cho Y-J, Won S, Lee J-E, Yu HJ, Kim S, Schroth GP, Luo S, Chun J. 2011. Duplex-specific nuclease efficiently removes rRNA for prokaryotic RNA-seq. Nucleic Acids Res. 39:e140. http://dx.doi.org/10.1093/nar /gkr617.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Yi, H.1
Cho, Y.-J.2
Won, S.3
Lee, J.-E.4
Yu, H.J.5
Kim, S.6
Schroth, G.P.7
Luo, S.8
Chun, J.9
-
6
-
-
41649114407
-
Microbial community gene expression in ocean surface waters
-
Frias-Lopez J, Shi Y, Tyson GW, Coleman ML, Schuster SC, Chisholm SW, DeLong EF. 2008. Microbial community gene expression in ocean surface waters. Proc. Natl. Acad. Sci. U. S. A. 105:3805-3810. http://dx.doi.org/10.1073/pnas.0708897105.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 3805-3810
-
-
Frias-Lopez, J.1
Shi, Y.2
Tyson, G.W.3
Coleman, M.L.4
Schuster, S.C.5
Chisholm, S.W.6
DeLong, E.F.7
-
7
-
-
79951810312
-
Quantitative analysis of a deeply sequenced marine microbial metatranscriptome
-
Gifford SM, Sharma S, Rinta-Kanto JM, Moran MA. 2011. Quantitative analysis of a deeply sequenced marine microbial metatranscriptome. ISME J. 5:461-472. http://dx.doi.org/10.1038/ismej.2010.141.
-
(2011)
ISME J.
, vol.5
, pp. 461-472
-
-
Gifford, S.M.1
Sharma, S.2
Rinta-Kanto, J.M.3
Moran, M.A.4
-
8
-
-
84858990515
-
Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes
-
Giannoukos G, Ciulla DM, Huang K, Haas BJ, Izard J, Levin JZ, Livny J, Earl AM, Gevers D, Ward DV, Nusbaum C, Birren BW, Gnirke A. 2012. Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes. Genome Biol. 13:r23. http://dx.doi.org/10.1186/gb-2012-13-3-r23.
-
(2012)
Genome Biol.
, vol.13
-
-
Giannoukos, G.1
Ciulla, D.M.2
Huang, K.3
Haas, B.J.4
Izard, J.5
Levin, J.Z.6
Livny, J.7
Earl, A.M.8
Gevers, D.9
Ward, D.V.10
Nusbaum, C.11
Birren, B.W.12
Gnirke, A.13
-
9
-
-
77954086440
-
Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics
-
Stewart FJ, Ottesen EA, DeLong EF. 2010. Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics. ISME J. 4:896-907. http://dx.doi.org/10.1038/ismej.2010.18.
-
(2010)
ISME J.
, vol.4
, pp. 896-907
-
-
Stewart, F.J.1
Ottesen, E.A.2
DeLong, E.F.3
-
10
-
-
84872920243
-
Organic carbon transformations in high-Arctic peat soils: key functions and microorganisms
-
Tveit A, Schwacke R, Svenning MM, Urich T. 2013. Organic carbon transformations in high-Arctic peat soils: key functions and microorganisms. ISME J. 7:299-311. http://dx.doi.org/10.1038/ismej.2012.99.
-
(2013)
ISME J.
, vol.7
, pp. 299-311
-
-
Tveit, A.1
Schwacke, R.2
Svenning, M.M.3
Urich, T.4
-
11
-
-
34447559993
-
Improved purification and PCR amplification of DNA from environmental samples
-
Arbeli Z, Fuentes CL. 2007. Improved purification and PCR amplification of DNA from environmental samples. FEMS Microbiol. Lett. 272: 269-275. http://dx.doi.org/10.1111/j.1574-6968.2007.00764.x.
-
(2007)
FEMS Microbiol. Lett.
, vol.272
, pp. 269-275
-
-
Arbeli, Z.1
Fuentes, C.L.2
-
12
-
-
0035843176
-
An enzymic 'latch' on a global carbon store-a shortage of oxygen locks up carbon in peatlands by restraining a single enzyme
-
Freeman C, Ostle N, Kang H. 2001. An enzymic 'latch' on a global carbon store-a shortage of oxygen locks up carbon in peatlands by restraining a single enzyme. Nature 409:149. http://dx.doi.org/10.1038/35051650.
-
(2001)
Nature
, vol.409
, pp. 149
-
-
Freeman, C.1
Ostle, N.2
Kang, H.3
-
13
-
-
82455163872
-
Drought-induced carbon loss in peatlands
-
Fenner N, Freeman C. 2011. Drought-induced carbon loss in peatlands. Nat. Geosci. 4:895-900. http://dx.doi.org/10.1038/ngeo1323.
-
(2011)
Nat. Geosci.
, vol.4
, pp. 895-900
-
-
Fenner, N.1
Freeman, C.2
-
14
-
-
35948954757
-
Soil eukaryotic functional diversity, a metatranscriptomic approach
-
Bailly J, Fraissinet-Tachet L, Verner MC, Debaud JC, Lemaire M, Wesolowski-Louvel M, Marmeisse R. 2007. Soil eukaryotic functional diversity, a metatranscriptomic approach. ISME J. 1:632-642. http://dx.doi.org/10.1038/ismej.2007.68.
-
(2007)
ISME J.
, vol.1
, pp. 632-642
-
-
Bailly, J.1
Fraissinet-Tachet, L.2
Verner, M.C.3
Debaud, J.C.4
Lemaire, M.5
Wesolowski-Louvel, M.6
Marmeisse, R.7
-
15
-
-
84855464743
-
Metatranscriptomics reveals the diversity of genes expressed by eukaryotes in forest soils
-
Damon C, Lehembre F, Oger-Desfeux C, Luis P, Ranger J, Fraissinet- Tachet L, Marmeisse R. 2012. Metatranscriptomics reveals the diversity of genes expressed by eukaryotes in forest soils. PLoS One 7:e28967. http: //dx.doi.org/10.1371/journal.pone.0028967.
-
(2012)
PLoS One
, vol.7
-
-
Damon, C.1
Lehembre, F.2
Oger-Desfeux, C.3
Luis, P.4
Ranger, J.5
Fraissinet-Tachet, L.6
Marmeisse, R.7
-
16
-
-
84865739463
-
Comparative metatranscriptomics reveals widespread community responses during phenanthrene degradation in soil
-
de Menezes A, Clipson N, Doyle E. 2012. Comparative metatranscriptomics reveals widespread community responses during phenanthrene degradation in soil. Environ. Microbiol. 14:2577-2588. http://dx.doi.org /10.1111/j.1462-2920.2012.02781.x.
-
(2012)
Environ. Microbiol.
, vol.14
, pp. 2577-2588
-
-
de Menezes, A.1
Clipson, N.2
Doyle, E.3
-
17
-
-
0030871461
-
Energetics of syntrophic cooperation in methanogenic degradation
-
Schink B. 1997. Energetics of syntrophic cooperation in methanogenic degradation. Microbiol. Mol. Biol. Rev. 61:262-280.
-
(1997)
Microbiol. Mol. Biol. Rev.
, vol.61
, pp. 262-280
-
-
Schink, B.1
-
18
-
-
84929875635
-
Syntrophism among prokaryotes
-
In Rosenberg E, DeLong E, Lory S, Stackebrandt E, Thompson F (ed). Springer, Berlin, Germany.
-
Schink B, Stams AM. 2013. Syntrophism among prokaryotes, p 471-493. In Rosenberg E, DeLong E, Lory S, Stackebrandt E, Thompson F (ed), The prokaryotes. Springer, Berlin, Germany.
-
(2013)
The prokaryotes
, pp. 471-493
-
-
Schink, B.1
Stams, A.M.2
-
19
-
-
35148814913
-
The methanogenic bacteria
-
In Dworkin M, Falkow S, Rosenberg E, Schleifer KH, Stackebrandt E (ed), 3rd ed, vol 2. Springer, New York, N.Y.
-
Whitman WB, Bowen TL, Boone DR. 2006. The methanogenic bacteria, p 165-207. In Dworkin M, Falkow S, Rosenberg E, Schleifer KH, Stackebrandt E (ed), The prokaryotes, 3rd ed, vol 2. Springer, New York, N.Y.
-
(2006)
The prokaryotes
, pp. 165-207
-
-
Whitman, W.B.1
Bowen, T.L.2
Boone, D.R.3
-
20
-
-
0003238763
-
The methanotrophs-the families Methylococcaceae and Methylocystaceae
-
In Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E (ed), 3rd ed, vol 2. Springer, New York, N.Y.
-
Bowman J. 2006. The methanotrophs-the families Methylococcaceae and Methylocystaceae, p 266-289. In Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E (ed), The prokaryotes, 3rd ed, vol 2. Springer, New York, N.Y.
-
(2006)
The prokaryotes
, pp. 266-289
-
-
Bowman, J.1
-
21
-
-
36849030274
-
Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia
-
Dunfield PF, Yuryev A, Senin P, Smirnova AV, Stott MB, Hou S, Ly B, Saw JH, Zhou Z, Ren Y, Wang J, Mountain BW, Crowe MA, Weatherby TM, Bodelier PL, Liesack W, Feng L, Wang L, Alam M. 2007. Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia. Nature 450:879-882. http://dx.doi.org/10.1038/nature06411.
-
(2007)
Nature
, vol.450
, pp. 879-882
-
-
Dunfield, P.F.1
Yuryev, A.2
Senin, P.3
Smirnova, A.V.4
Stott, M.B.5
Hou, S.6
Ly, B.7
Saw, J.H.8
Zhou, Z.9
Ren, Y.10
Wang, J.11
Mountain, B.W.12
Crowe, M.A.13
Weatherby, T.M.14
Bodelier, P.L.15
Liesack, W.16
Feng, L.17
Wang, L.18
Alam, M.19
-
22
-
-
1042267966
-
Methanotrophic diversity in high arctic wetlands on the islands of Svalbard (Norway)- denaturing gradient gel electrophoresis analysis of soil DNA and enrichment cultures
-
Wartiainen I, Hestnes AG, Svenning MM. 2003. Methanotrophic diversity in high arctic wetlands on the islands of Svalbard (Norway)- denaturing gradient gel electrophoresis analysis of soil DNA and enrichment cultures. Can. J. Microbiol. 49:602-612. http://dx.doi.org/10.1139 /w03-080.
-
(2003)
Can. J. Microbiol.
, vol.49
, pp. 602-612
-
-
Wartiainen, I.1
Hestnes, A.G.2
Svenning, M.M.3
-
23
-
-
58149084076
-
Diversity of aerobic methanotrophic bacteria in a permafrost active layer soil of the Lena Delta, Siberia
-
Liebner S, Rublack K, Stuehrmann T, Wagner D. 2009. Diversity of aerobic methanotrophic bacteria in a permafrost active layer soil of the Lena Delta, Siberia. Microb. Ecol. 57:25-35. http://dx.doi.org/10.1007 /s00248-008-9411-x.
-
(2009)
Microb. Ecol.
, vol.57
, pp. 25-35
-
-
Liebner, S.1
Rublack, K.2
Stuehrmann, T.3
Wagner, D.4
-
24
-
-
36849095089
-
4 oxidation in freshwater peatlands
-
4 oxidation in freshwater peatlands. Geomicrobiol. J. 24:583-597. http://dx.doi.org/10.1080/01490450701672083.
-
(2007)
Geomicrobiol. J.
, vol.24
, pp. 583-597
-
-
Smemo, K.A.1
Yavitt, J.B.2
-
25
-
-
84857011001
-
PANDAseq: PAired-eND Assembler for Illumina sequences
-
Masella AP, Bartram AK, Truszkowski JM, Brown DG, Neufeld JD. 2012. PANDAseq: PAired-eND Assembler for Illumina sequences. BMC Bioinformatics 13:31. http://dx.doi.org/10.1186/1471-2105-13-31.
-
(2012)
BMC Bioinformatics
, vol.13
, pp. 31
-
-
Masella, A.P.1
Bartram, A.K.2
Truszkowski, J.M.3
Brown, D.G.4
Neufeld, J.D.5
-
26
-
-
79952422304
-
Quality control and preprocessing of metagenomic datasets
-
Schmieder R, Edwards R. 2011. Quality control and preprocessing of metagenomic datasets. Bioinformatics 27:863-864. http://dx.doi.org/10.1093/bioinformatics/btr026.
-
(2011)
Bioinformatics
, vol.27
, pp. 863-864
-
-
Schmieder, R.1
Edwards, R.2
-
27
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang JH, Zhang Z, Miller W, Lipman DJ. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402. http: //dx.doi.org/10.1093/nar/25.17.3389.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.H.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
28
-
-
84869030635
-
CREST-classification resources for environmental sequence tags
-
Lanzén A, Jørgensen SL, Huson DH, Gorfer M, Grindhaug SH, Jonassen I, Øvreås L, Urich T. 2012. CREST-classification resources for environmental sequence tags. PLoS One 7:e49334. http://dx.doi.org/10.1371/journal.pone.0049334.
-
(2012)
PLoS One
, vol.7
-
-
Lanzén, A.1
Jørgensen, S.L.2
Huson, D.H.3
Gorfer, M.4
Grindhaug, S.H.5
Jonassen, I.6
Øvreås, L.7
Urich, T.8
-
29
-
-
79951535930
-
Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG
-
Mitra S, Rupek P, Richter D, Urich T, Gilbert J, Meyer F, Wilke A, Huson D. 2011. Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG. BMC Bioinformatics 12:S21. http://dx.doi.org/10.1186/1471-2105-12-S1-S21.
-
(2011)
BMC Bioinformatics
, vol.12
-
-
Mitra, S.1
Rupek, P.2
Richter, D.3
Urich, T.4
Gilbert, J.5
Meyer, F.6
Wilke, A.7
Huson, D.8
-
30
-
-
84863304598
-
R: a language and environment for statistical computing
-
R Development Core Team. R Foundation for Statistical Computing, Vienna, Austria
-
R Development Core Team. 2009. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.
-
(2009)
-
-
-
31
-
-
79959821211
-
Biplots in practice
-
Bilbao, Spain
-
Greenacre M. 2010. Biplots in practice, p 79-88. Fundación BBVA, Bilbao, Spain. http://www.multivariatestatistics.org/biplots.html.
-
(2010)
Fundación BBVA
, pp. 79-88
-
-
Greenacre, M.1
-
32
-
-
84906348503
-
Computation of correspondence analysis
-
In Keiding N, Morgan B, Speed T, van der Heijden P (ed), 2nd ed. Chapman and Hall/CRC, Boca Raton, F.L.
-
Greenacre M. 2007. Computation of correspondence analysis, p 213-259. In Keiding N, Morgan B, Speed T, van der Heijden P (ed), Correspondence analysis in practice, 2nd ed. Chapman and Hall/CRC, Boca Raton, F.L.
-
(2007)
Correspondence analysis in practice
, pp. 213-259
-
-
Greenacre, M.1
-
33
-
-
31144433158
-
Methylobacter tundripaludum sp. nov., a methane-oxidizing bacterium from Arctic wetland soil on the Svalbard islands, Norway (78 degrees N)
-
Wartiainen I, Hestnes AG, McDonald IR, Svenning MM. 2006. Methylobacter tundripaludum sp. nov., a methane-oxidizing bacterium from Arctic wetland soil on the Svalbard islands, Norway (78 degrees N). Int. J. Syst. Evol. Microbiol. 56:109 -113. http://dx.doi.org/10.1099 /ijs.0.63728-0.
-
(2006)
Int. J. Syst. Evol. Microbiol.
, vol.56
, pp. 109-113
-
-
Wartiainen, I.1
Hestnes, A.G.2
McDonald, I.R.3
Svenning, M.M.4
-
34
-
-
80655146009
-
Genome sequence of the Arctic methanotroph Methylobacter tundripaludum SV96
-
Svenning MM, Hestnes AG, Wartiainen I, Stein LY, Klotz MG, Kalyuzhnaya MG, Spang A, Bringel F, Vuilleumier S, Lajus A, Medigue C, Bruce DC, Cheng JF, Goodwin L, Ivanova N, Han J, Han CS, Hauser L, Held B, Land ML, Lapidus A, Lucas S, Nolan M, Pitluck S, Woyke T. 2011. Genome sequence of the Arctic methanotroph Methylobacter tundripaludum SV96. J. Bacteriol. 193:6418-6419. http://dx.doi.org/10.1128 /JB.05380-11.
-
(2011)
J. Bacteriol.
, vol.193
, pp. 6418-6419
-
-
Svenning, M.M.1
Hestnes, A.G.2
Wartiainen, I.3
Stein, L.Y.4
Klotz, M.G.5
Kalyuzhnaya, M.G.6
Spang, A.7
Bringel, F.8
Vuilleumier, S.9
Lajus, A.10
Medigue, C.11
Bruce, D.C.12
Cheng, J.F.13
Goodwin, L.14
Ivanova, N.15
Han, J.16
Han, C.S.17
Hauser, L.18
Held, B.19
Land, M.L.20
Lapidus, A.21
Lucas, S.22
Nolan, M.23
Pitluck, S.24
Woyke, T.25
more..
-
35
-
-
32644435694
-
Degradation of RNA in bacteria: comparison of mRNA and stable RNA
-
Deutscher MP. 2006. Degradation of RNA in bacteria: comparison of mRNA and stable RNA. Nucleic Acids Res. 34:659-666. http://dx.doi.org /10.1093/nar/gkj472.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 659-666
-
-
Deutscher, M.P.1
-
36
-
-
74249111651
-
A study of PCR inhibition mechanisms using real time PCR
-
Opel KL, Chung D, McCord BR. 2010. A study of PCR inhibition mechanisms using real time PCR. J. Forensic Sci. 55:25-33. http://dx.doi.org/10.1111/j.1556-4029.2009.01245.x.
-
(2010)
J. Forensic Sci.
, vol.55
, pp. 25-33
-
-
Opel, K.L.1
Chung, D.2
McCord, B.R.3
-
37
-
-
0037960553
-
Analytical approaches for characterizing soil organic matter
-
Kögel-Knabner I. 2000. Analytical approaches for characterizing soil organic matter. Org. Geochem. 31:609-625. http://dx.doi.org/10.1016 /S0146-6380(00)00042-5.
-
(2000)
Org. Geochem.
, vol.31
, pp. 609-625
-
-
Kögel-Knabner, I.1
-
38
-
-
69949134920
-
Plant cell walls throughout evolution: towards a molecular understanding of their design principles
-
Sarkar P, Bosneaga E, Auer M. 2009. Plant cell walls throughout evolution: towards a molecular understanding of their design principles. J. Exp. Bot. 60:3615-3635. http://dx.doi.org/10.1093/jxb/erp245.
-
(2009)
J. Exp. Bot.
, vol.60
, pp. 3615-3635
-
-
Sarkar, P.1
Bosneaga, E.2
Auer, M.3
-
39
-
-
19544362739
-
Trophic interactions in the methanogenic microbial community of low-temperature terrestrial ecosystems
-
Kotsyurbenko OR. 2005. Trophic interactions in the methanogenic microbial community of low-temperature terrestrial ecosystems. FEMS Microbiol. Ecol. 53:3-13. http://dx.doi.org/10.1016/j.femsec.2004.12.009.
-
(2005)
FEMS Microbiol. Ecol.
, vol.53
, pp. 3-13
-
-
Kotsyurbenko, O.R.1
-
40
-
-
84874681931
-
Phylogenetic distribution of potential cellulases in bacteria
-
Berlemont R, Martiny AC. 2013. Phylogenetic distribution of potential cellulases in bacteria. Appl. Environ. Microbiol. 79:1545-1554. http://dx.doi.org/10.1128/AEM.03305-12.
-
(2013)
Appl. Environ. Microbiol.
, vol.79
, pp. 1545-1554
-
-
Berlemont, R.1
Martiny, A.C.2
-
41
-
-
58149200943
-
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for glycogenomics
-
Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V, Henrissat B. 2009. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for glycogenomics. Nucleic Acids Res. 37:D233-D238. http://dx.doi.org/10.1093/nar/gkn663.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Cantarel, B.L.1
Coutinho, P.M.2
Rancurel, C.3
Bernard, T.4
Lombard, V.5
Henrissat, B.6
-
42
-
-
19644385555
-
Archaeal communities in High Arctic wetlands at Spitsbergen, Norway (78°N) as characterized by 16S rRNA gene fingerprinting
-
Høj L, Olsen RA, Torsvik VL. 2005. Archaeal communities in High Arctic wetlands at Spitsbergen, Norway (78°N) as characterized by 16S rRNA gene fingerprinting. FEMS Microbiol. Ecol. 53:89-101. http://dx.doi.org/10.1016/j.femsec.2005.01.004.
-
(2005)
FEMS Microbiol. Ecol.
, vol.53
, pp. 89-101
-
-
Høj, L.1
Olsen, R.A.2
Torsvik, V.L.3
-
43
-
-
33745767937
-
Vertical profiles of methanogenesis and methanogens in two contrasting acidic peatlands in central New York State, U
-
Cadillo-Quiroz H, Brauer S, Yashiro E, Sun C, Yavitt J, Zinder S. 2006. Vertical profiles of methanogenesis and methanogens in two contrasting acidic peatlands in central New York State, U. S. A. Environ. Microbiol. 8:1428-1440. http://dx.doi.org/10.1111/j.1462-2920.2006.01036.x.
-
(2006)
S. A. Environ. Microbiol.
, vol.8
, pp. 1428-1440
-
-
Cadillo-Quiroz, H.1
Brauer, S.2
Yashiro, E.3
Sun, C.4
Yavitt, J.5
Zinder, S.6
-
44
-
-
0036890052
-
Depth related diversity of methanogen Archaea in Finnish oligotrophic fen
-
Galand PE, Saarnio S, Fritze H, Yrjala K. 2002. Depth related diversity of methanogen Archaea in Finnish oligotrophic fen. FEMS Microbiol. Ecol. 42:441-449. http://dx.doi.org/10.1111/j.1574-6941.2002.tb01033.x.
-
(2002)
FEMS Microbiol. Ecol.
, vol.42
, pp. 441-449
-
-
Galand, P.E.1
Saarnio, S.2
Fritze, H.3
Yrjala, K.4
-
45
-
-
33644954621
-
Methanogen communities along a primary succession transect of mire ecosystems
-
Merilä P, Galand PE, Fritze H, Tuittila ES, Kukko-oja K, Laine J, Yrjala K. 2006. Methanogen communities along a primary succession transect of mire ecosystems. FEMS Microbiol. Ecol. 55:221-229. http://dx.doi.org/10.1111/j.1574-6941.2005.00030.x.
-
(2006)
FEMS Microbiol. Ecol.
, vol.55
, pp. 221-229
-
-
Merilä, P.1
Galand, P.E.2
Fritze, H.3
Tuittila, E.S.4
Kukko-oja, K.5
Laine, J.6
Yrjala, K.7
-
46
-
-
6944237344
-
Acetoclastic and hydrogenotrophic methane production and methanogenic populations in an acidic West- Siberian peat bog
-
Kotsyurbenko OR, Chin KJ, Glagolev MV, Stubner S, Simankova MV, Nozhevnikova AN, Conrad R. 2004. Acetoclastic and hydrogenotrophic methane production and methanogenic populations in an acidic West- Siberian peat bog. Environ. Microbiol. 6:1159-1173. http://dx.doi.org/10.1111/j.1462-2920.2004.00634.x.
-
(2004)
Environ. Microbiol.
, vol.6
, pp. 1159-1173
-
-
Kotsyurbenko, O.R.1
Chin, K.J.2
Glagolev, M.V.3
Stubner, S.4
Simankova, M.V.5
Nozhevnikova, A.N.6
Conrad, R.7
-
47
-
-
0031105939
-
Temperature dependence of methane production from different precursors in a profundal sediment (Lake Constance)
-
Schulz S, Matsuyama H, Conrad R. 1997. Temperature dependence of methane production from different precursors in a profundal sediment (Lake Constance). FEMS Microbiol. Ecol. 22:207-213. http://dx.doi.org /10.1111/j.1574-6941.1997.tb00372.x.
-
(1997)
FEMS Microbiol. Ecol.
, vol.22
, pp. 207-213
-
-
Schulz, S.1
Matsuyama, H.2
Conrad, R.3
-
48
-
-
0029659727
-
Influence of temperature on pathways to methane production in the permanently cold profundal sediment of Lake Constance
-
Schulz S, Conrad R. 1996. Influence of temperature on pathways to methane production in the permanently cold profundal sediment of Lake Constance. FEMS Microbiol. Ecol. 20:1-14. http://dx.doi.org/10.1111/j.1574-6941.1996.tb00299.x.
-
(1996)
FEMS Microbiol. Ecol.
, vol.20
, pp. 1-14
-
-
Schulz, S.1
Conrad, R.2
-
49
-
-
0033754494
-
Effect of temperature on carbon and electron flow and on the archaeal community in methanogenic rice field soil
-
Fey A, Conrad R. 2000. Effect of temperature on carbon and electron flow and on the archaeal community in methanogenic rice field soil. Appl. Environ. Microbiol. 66:4790-4797. http://dx.doi.org/10.1128/AEM.66.11.4790-4797.2000.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 4790-4797
-
-
Fey, A.1
Conrad, R.2
-
50
-
-
77950258771
-
Nitrite-driven anaerobic methane oxidation by oxygenic bacteria
-
Ettwig KF, Butler MK, Le Paslier D, Pelletier E, Mangenot S, Kuypers MMM, Schreiber F, Dutilh BE, Zedelius J, de Beer D, Gloerich J, Wessels H, van Alen T, Luesken F, Wu ML, van de Pas-Schoonen KT, den Camp H, Janssen-Megens EM, Francoijs KJ, Stunnenberg H, Weissenbach J, Jetten MSM, Strous M. 2010. Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature 464:543-548. http://dx.doi.org /10.1038/nature08883.
-
(2010)
Nature
, vol.464
, pp. 543-548
-
-
Ettwig, K.F.1
Butler, M.K.2
Le Paslier, D.3
Pelletier, E.4
Mangenot, S.5
Kuypers, M.M.M.6
Schreiber, F.7
Dutilh, B.E.8
Zedelius, J.9
de Beer, D.10
Gloerich, J.11
Wessels, H.12
van Alen, T.13
Luesken, F.14
Wu, M.L.15
van de Pas-Schoonen, K.T.16
den Camp, H.17
Janssen-Megens, E.M.18
Francoijs, K.J.19
Stunnenberg, H.20
Weissenbach, J.21
Jetten, M.S.M.22
Strous, M.23
more..
-
51
-
-
84864506229
-
Anaerobic oxidation of methane: an underappreciated aspect of methane cycling in peatland ecosystems?
-
Smemo KA, Yavitt JB. 2010. Anaerobic oxidation of methane: an underappreciated aspect of methane cycling in peatland ecosystems? Biogeosciences 7:7945-7983. http://dx.doi.org/10.5194/bgd-7-7945-2010.
-
(2010)
Biogeosciences
, vol.7
, pp. 7945-7983
-
-
Smemo, K.A.1
Yavitt, J.B.2
-
52
-
-
84890147287
-
Highly efficient methane biocatalysis revealed in a methanotrophic bacterium
-
Kalyuzhnaya MG, Yang S, Rozova ON, Smalley NE, Clubb J, Lamb A, Gowda GA Nagana, Raftery D, Fu Y, Bringel F, Vuilleumier S, Beck DAC, Trotsenko YA, Khmelenina VN, Lidstrom ME. 2013. Highly efficient methane biocatalysis revealed in a methanotrophic bacterium. Nat. Commun. 4:2785. http://dx.doi.org/10.1038/ncomms3785.
-
(2013)
Nat. Commun.
, vol.4
, pp. 2785
-
-
Kalyuzhnaya, M.G.1
Yang, S.2
Rozova, O.N.3
Smalley, N.E.4
Clubb, J.5
Lamb, A.6
Nagana, G.G.A.7
Raftery, D.8
Fu, Y.9
Bringel, F.10
Vuilleumier, S.11
Beck, D.A.C.12
Trotsenko, Y.A.13
Khmelenina, V.N.14
Lidstrom, M.E.15
-
53
-
-
0028964521
-
Aerobic and anaerobic starvation metabolism in methanotrophic bacteria
-
Roslev P, King GM. 1995. Aerobic and anaerobic starvation metabolism in methanotrophic bacteria. Appl. Environ. Microbiol. 61:1563- 1570.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 1563-1570
-
-
Roslev, P.1
King, G.M.2
|