메뉴 건너뛰기




Volumn 9, Issue 8, 2014, Pages 1780-1787

Click modification of RNA at adenosine: Structure and reactivity of 7-ethynyl- and 7-triazolyl-8-aza-7-deazaadenosine in RNA

Author keywords

[No Author keywords available]

Indexed keywords

7 ETHYNYL 8 AZA 7 DEAZAADENOSINE; 7 TRIAZOLYL 8 AZA 7 DEAZAADENOSINE; ADENOSINE; ADENOSINE DEAMINASE; ALKYNE; AZIDE; COPPER; NUCLEIC ACID BASE; RNA; RNA DIRECTED DNA POLYMERASE; SINGLE STRANDED RNA; TRIAZOLE; UNCLASSIFIED DRUG; TUBERCIDIN;

EID: 84906277551     PISSN: 15548929     EISSN: 15548937     Source Type: Journal    
DOI: 10.1021/cb500270x     Document Type: Article
Times cited : (29)

References (32)
  • 2
    • 84880891125 scopus 로고    scopus 로고
    • Chemical reporters for biological discovery
    • Grammel, M. and Hang, H. C. (2013) Chemical reporters for biological discovery Nat. Chem. Biol. 9, 475-484
    • (2013) Nat. Chem. Biol. , vol.9 , pp. 475-484
    • Grammel, M.1    Hang, H.C.2
  • 3
    • 84861446300 scopus 로고    scopus 로고
    • Chemical reporters for monitoring RNA synthesis and poly(A) tail dynamics
    • Grammel, M., Hang, H., and Conrad, N. K. (2012) Chemical reporters for monitoring RNA synthesis and poly(A) tail dynamics ChemBioChem. 13, 112-115
    • (2012) ChemBioChem. , vol.13 , pp. 112-115
    • Grammel, M.1    Hang, H.2    Conrad, N.K.3
  • 5
    • 57349121991 scopus 로고    scopus 로고
    • Exploring RNA transcription and turnover in vivo by using click chemistry
    • Jao, C. Y. and Salic, A. (2008) Exploring RNA transcription and turnover in vivo by using click chemistry Proc. Natl. Acad. Sci. U.S.A. 105, 15779-15784
    • (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , pp. 15779-15784
    • Jao, C.Y.1    Salic, A.2
  • 6
    • 84872121549 scopus 로고    scopus 로고
    • 5-Ethynylcytidine as a new agent for detecting RNA synthesis in live cells by "click" chemistry
    • Qu, D., Zhou, L., Wang, W., Wang, Z., Wang, G., Chi, W., and Zhang, B. (2013) 5-Ethynylcytidine as a new agent for detecting RNA synthesis in live cells by "click" chemistry Anal. Biochem. 434, 128-135
    • (2013) Anal. Biochem. , vol.434 , pp. 128-135
    • Qu, D.1    Zhou, L.2    Wang, W.3    Wang, Z.4    Wang, G.5    Chi, W.6    Zhang, B.7
  • 7
    • 84861566819 scopus 로고    scopus 로고
    • Site-specific terminal and internal labeling of RNA by poly(A) polymerase tailing and copper-catalyzed or copper-free strain-promoted click chemistry
    • Winz, M.-L., Samanta, A., Benzinger, D., and Jaschke, A. (2012) Site-specific terminal and internal labeling of RNA by poly(A) polymerase tailing and copper-catalyzed or copper-free strain-promoted click chemistry Nucleic Acids Res. 40, e78
    • (2012) Nucleic Acids Res. , vol.40 , pp. 78
    • Winz, M.-L.1    Samanta, A.2    Benzinger, D.3    Jaschke, A.4
  • 8
    • 77957286568 scopus 로고    scopus 로고
    • New strategy for the synthesis of chemically modified RNA constructs exemplified by hairpin and hammerhead ribozymes
    • El-Sagheer, A. H. and Brown, T. (2010) New strategy for the synthesis of chemically modified RNA constructs exemplified by hairpin and hammerhead ribozymes Proc. Natl. Acad. Sci. U.S.A. 107, 15329-15334
    • (2010) Proc. Natl. Acad. Sci. U.S.A. , vol.107 , pp. 15329-15334
    • El-Sagheer, A.H.1    Brown, T.2
  • 9
    • 79953139279 scopus 로고    scopus 로고
    • Expanding the chemical scope of RNA:methyltransferases to site-specific alkynylation of RNA for click labeling
    • Motorin, Y., Burhenne, J., Teimer, R., Koynov, K., Willnow, S., Weinhold, E., and Helm, M. (2011) Expanding the chemical scope of RNA:methyltransferases to site-specific alkynylation of RNA for click labeling Nucleic Acids Res. 39, 1943-1952
    • (2011) Nucleic Acids Res. , vol.39 , pp. 1943-1952
    • Motorin, Y.1    Burhenne, J.2    Teimer, R.3    Koynov, K.4    Willnow, S.5    Weinhold, E.6    Helm, M.7
  • 11
    • 79954429139 scopus 로고    scopus 로고
    • Pin-point chemical modification of RNA with diverse molecules through the functionality transfer reaction and the copper-catalyzed azide-alkyne cycloaddition reaction
    • Onizuka, K., Shibata, A., Taniguchi, Y., and Sasaki, S. (2011) Pin-point chemical modification of RNA with diverse molecules through the functionality transfer reaction and the copper-catalyzed azide-alkyne cycloaddition reaction Chem. Commun. 47, 5004-5006
    • (2011) Chem. Commun. , vol.47 , pp. 5004-5006
    • Onizuka, K.1    Shibata, A.2    Taniguchi, Y.3    Sasaki, S.4
  • 12
    • 78650694123 scopus 로고    scopus 로고
    • Click chemistry for rapid labeling and ligation of RNA
    • Paredes, E. and Das, S. R. (2011) Click chemistry for rapid labeling and ligation of RNA ChemBioChem. 12, 125-131
    • (2011) ChemBioChem. , vol.12 , pp. 125-131
    • Paredes, E.1    Das, S.R.2
  • 14
  • 15
    • 77749249165 scopus 로고    scopus 로고
    • N 2-Modified 2-aminopurine ribonucleosides as groove-modulating adenosine replacements in duplex RNA
    • Peacock, H., Maydanovych, O., and Beal, P. A. (2010) N 2-Modified 2-aminopurine ribonucleosides as groove-modulating adenosine replacements in duplex RNA Org. Lett. 12, 1044-1047
    • (2010) Org. Lett. , vol.12 , pp. 1044-1047
    • Peacock, H.1    Maydanovych, O.2    Beal, P.A.3
  • 16
    • 25844435732 scopus 로고    scopus 로고
    • Crystal structures, reactivity and inferred acylation transition states for 2′-amine substituted RNA
    • Gherghe, C. M., Krahn, J. M., and Weeks, K. M. (2005) Crystal structures, reactivity and inferred acylation transition states for 2′-amine substituted RNA J. Am. Chem. Soc. 127, 13622-13628
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 13622-13628
    • Gherghe, C.M.1    Krahn, J.M.2    Weeks, K.M.3
  • 18
    • 33748609388 scopus 로고    scopus 로고
    • Click chemistry as a reliable method for the high-density postsynthetic functionalization of alkyne-modified DNA
    • Gierlich, J., Burley, G. A., Gramlich, P. M. E., Hammond, D. M., and Carell, T. (2006) Click chemistry as a reliable method for the high-density postsynthetic functionalization of alkyne-modified DNA Org. Lett. 8, 3639-3642
    • (2006) Org. Lett. , vol.8 , pp. 3639-3642
    • Gierlich, J.1    Burley, G.A.2    Gramlich, P.M.E.3    Hammond, D.M.4    Carell, T.5
  • 20
    • 0035813885 scopus 로고    scopus 로고
    • Functionalized DNA: A new replicable biopolymer
    • Thum, O., Jaeger, S., and Famulok, M. (2001) Functionalized DNA: a new replicable biopolymer Angew. Chem., Int. Ed. 40, 3990-3993
    • (2001) Angew. Chem., Int. Ed. , vol.40 , pp. 3990-3993
    • Thum, O.1    Jaeger, S.2    Famulok, M.3
  • 21
    • 84864188328 scopus 로고    scopus 로고
    • Structures of KlenTaq DNA polymerase caught while incorporating C5-modified pyrimidine and C7-modified 7-deazapurine nucleoside triphosphates
    • Bergen, K., Steck, A. L., Strutt, S., Baccaro, A., Welte, W., Diederichs, K., and Marx, A. (2012) Structures of KlenTaq DNA polymerase caught while incorporating C5-modified pyrimidine and C7-modified 7-deazapurine nucleoside triphosphates J. Am. Chem. Soc. 134, 11840-11843
    • (2012) J. Am. Chem. Soc. , vol.134 , pp. 11840-11843
    • Bergen, K.1    Steck, A.L.2    Strutt, S.3    Baccaro, A.4    Welte, W.5    Diederichs, K.6    Marx, A.7
  • 22
    • 0028949935 scopus 로고
    • Classical and novel approaches to the detection and localization of the numberous modified nucleotides in eukaryotic ribosomal RNA
    • Maden, B. E. H., Corbett, M. E., Heeney, P. A., Pugh, K., and Ajuh, P. M. (1995) Classical and novel approaches to the detection and localization of the numberous modified nucleotides in eukaryotic ribosomal RNA Biochimie 77, 22-29
    • (1995) Biochimie , vol.77 , pp. 22-29
    • Maden, B.E.H.1    Corbett, M.E.2    Heeney, P.A.3    Pugh, K.4    Ajuh, P.M.5
  • 24
    • 84870344968 scopus 로고    scopus 로고
    • Mechanistic insights into editing-site specificity of ADARs
    • Kuttan, A. and Bass, B. L. (2012) Mechanistic insights into editing-site specificity of ADARs Proc. Natl. Acad. Sci. U.S.A. 109, E3295-E3304
    • (2012) Proc. Natl. Acad. Sci. U.S.A. , vol.109
    • Kuttan, A.1    Bass, B.L.2
  • 26
    • 84868088487 scopus 로고    scopus 로고
    • Nucleoside analog studies indicate mechanistic differences between RNA-editing adenosine deaminases
    • Mizrahi, R. A., Phelps, K. J., Ching, A. Y., and Beal, P. A. (2012) Nucleoside analog studies indicate mechanistic differences between RNA-editing adenosine deaminases Nucleic Acids Res. 40, 9825-9835
    • (2012) Nucleic Acids Res. , vol.40 , pp. 9825-9835
    • Mizrahi, R.A.1    Phelps, K.J.2    Ching, A.Y.3    Beal, P.A.4
  • 29
    • 33846426122 scopus 로고    scopus 로고
    • Solving structures of protein complexes by molecular replacement with Phaser
    • McCoy, A. (2007) Solving structures of protein complexes by molecular replacement with Phaser Acta Crystallogr., Sect. D: Biol. Crystallogr. 63, 32-41
    • (2007) Acta Crystallogr., Sect. D: Biol. Crystallogr. , vol.63 , pp. 32-41
    • McCoy, A.1
  • 32
    • 0035723065 scopus 로고    scopus 로고
    • Mapping 2′-O-methyl groups in ribosomal RNA
    • Maden, B. E. (2001) Mapping 2′-O-methyl groups in ribosomal RNA Methods 25, 374-382
    • (2001) Methods , vol.25 , pp. 374-382
    • Maden, B.E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.