메뉴 건너뛰기




Volumn 434, Issue 1, 2013, Pages 128-135

5-Ethynylcytidine as a new agent for detecting RNA synthesis in live cells by "click" chemistry

Author keywords

"Click" chemistry; 5 Ethynylcytidine; EU; RNA labeling

Indexed keywords

BIOMOLECULES; CELL CULTURE; CHEMICAL BONDS; CHEMICAL REACTIONS; DNA; EUROPIUM; FLUORESCENCE IMAGING;

EID: 84872121549     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2012.11.023     Document Type: Article
Times cited : (35)

References (20)
  • 1
    • 0021280842 scopus 로고
    • 3H]orotic acid incorporation into the RNA of migrating columnar cells in the rat small intestine
    • 3H]orotic acid incorporation into the RNA of migrating columnar cells in the rat small intestine J. Cell Biol. 98 1984 1619 1629
    • (1984) J. Cell Biol. , vol.98 , pp. 1619-1629
    • Uddin, M.1    Altmann, G.G.2    Leblond, C.P.3
  • 2
    • 0027305616 scopus 로고
    • Fluorescent labeling of nascent RNA reveals transcription by RNA polymerase II in domains scattered throughout the nucleus
    • D. Wansink, W. Schul, I. van der Kraan, B. van Steensel, R. van Driel, and L. de Jong Fluorescent labeling of nascent RNA reveals transcription by RNA polymerase II in domains scattered throughout the nucleus J. Cell Biol. 122 1993 283 293
    • (1993) J. Cell Biol. , vol.122 , pp. 283-293
    • Wansink, D.1    Schul, W.2    Van Der Kraan, I.3    Van Steensel, B.4    Van Driel, R.5    De Jong, L.6
  • 4
    • 0033538831 scopus 로고    scopus 로고
    • Three-dimensional visualization of transcription sites and their association with splicing factor-rich nuclear speckles
    • X. Wei, S. Somanathan, J. Samarabandu, and R. Berezney Three-dimensional visualization of transcription sites and their association with splicing factor-rich nuclear speckles J. Cell Biol. 146 1999 543 558
    • (1999) J. Cell Biol. , vol.146 , pp. 543-558
    • Wei, X.1    Somanathan, S.2    Samarabandu, J.3    Berezney, R.4
  • 5
    • 0031045526 scopus 로고    scopus 로고
    • Labeling of RNA transcripts of eukaryotic cells in culture with BrUTP using a liposome transfection reagent (DOTAP)
    • G. Haukenes, A.M. Szilvay, K.A. Brokstad, A. Kanestrøm, and K.H. Kalland Labeling of RNA transcripts of eukaryotic cells in culture with BrUTP using a liposome transfection reagent (DOTAP) Biotechniques 22 1997 308 312
    • (1997) Biotechniques , vol.22 , pp. 308-312
    • Haukenes, G.1    Szilvay, A.M.2    Brokstad, K.A.3    Kanestrøm, A.4    Kalland, K.H.5
  • 6
    • 16644387794 scopus 로고    scopus 로고
    • Nascent RNA synthesis in the context of chromatin architecture
    • N. Sadoni, and D. Zink Nascent RNA synthesis in the context of chromatin architecture Chromosome Res. 12 2004 439 451
    • (2004) Chromosome Res. , vol.12 , pp. 439-451
    • Sadoni, N.1    Zink, D.2
  • 7
    • 0032880930 scopus 로고    scopus 로고
    • Nuclear organization studied with the help of a hypotonic shift: Its use permits hydrophilic molecules to enter into living cells
    • K. Koberna, D. Staněk, J. Malínský, M. Eltsov, A. Pliss, V. Čtrnáctá, Š. Cermanová, and I. Raška Nuclear organization studied with the help of a hypotonic shift: its use permits hydrophilic molecules to enter into living cells Chromosoma 108 1999 325 335
    • (1999) Chromosoma , vol.108 , pp. 325-335
    • Koberna, K.1    Staněk, D.2    Malínský, J.3    Eltsov, M.4    Pliss, A.5    Čtrnáctá, V.6    Cermanová, Š.7    Raška, I.8
  • 8
    • 0034329421 scopus 로고    scopus 로고
    • Segregation of RNA and separate packaging of DNA and RNA in apoptotic bodies during apoptosis
    • H.D. Halicka, E. Bedner, and Z. Darzynkiewicz Segregation of RNA and separate packaging of DNA and RNA in apoptotic bodies during apoptosis Exp. Cell Res. 260 2000 248 256
    • (2000) Exp. Cell Res. , vol.260 , pp. 248-256
    • Halicka, H.D.1    Bedner, E.2    Darzynkiewicz, Z.3
  • 9
    • 57349121991 scopus 로고    scopus 로고
    • Exploring RNA transcription and turnover in vivo by using click chemistry
    • C.Y. Jao, and A. Salic Exploring RNA transcription and turnover in vivo by using click chemistry Proc. Natl. Acad. Sci. USA 105 2008 15779 15784
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 15779-15784
    • Jao, C.Y.1    Salic, A.2
  • 10
    • 0037012920 scopus 로고    scopus 로고
    • Peptidotriazoles on solid phase: [1,2,3]-triazoles by regiospecific copper(I)-catalyzed 1,3-dipolar cycloadditions of terminal alkynes to azides
    • C.W. Tornøe, C. Christensen, and M. Meldal Peptidotriazoles on solid phase: [1,2,3]-triazoles by regiospecific copper(I)-catalyzed 1,3-dipolar cycloadditions of terminal alkynes to azides J. Org. Chem. 67 2002 3057 3064
    • (2002) J. Org. Chem. , vol.67 , pp. 3057-3064
    • Tornøe, C.W.1    Christensen, C.2    Meldal, M.3
  • 11
    • 0037099395 scopus 로고    scopus 로고
    • A stepwise huisgen cycloaddition process: Copper(I)-catalyzed regioselective "ligation" of azides and terminal alkynes
    • V.V. Rostovtsev, L.G. Green, V.V. Fokin, and K.B. Sharpless A stepwise huisgen cycloaddition process: copper(I)-catalyzed regioselective "ligation" of azides and terminal alkynes Angew. Chem. Int. Ed. Engl. 41 2002 2596 2599
    • (2002) Angew. Chem. Int. Ed. Engl. , vol.41 , pp. 2596-2599
    • Rostovtsev, V.V.1    Green, L.G.2    Fokin, V.V.3    Sharpless, K.B.4
  • 12
    • 77952110974 scopus 로고    scopus 로고
    • A semi-automated non-radioactive system for measuring recovery of RNA synthesis and unscheduled DNA synthesis using ethynyluracil derivatives
    • Y. Nakazawa, S. Yamashita, A.R. Lehmann, and T. Ogi A semi-automated non-radioactive system for measuring recovery of RNA synthesis and unscheduled DNA synthesis using ethynyluracil derivatives DNA Repair 9 2010 506 516
    • (2010) DNA Repair , vol.9 , pp. 506-516
    • Nakazawa, Y.1    Yamashita, S.2    Lehmann, A.R.3    Ogi, T.4
  • 13
    • 84872858553 scopus 로고    scopus 로고
    • Capture and analysis of newly synthesized RNA - A novel enabling technology to study high resolution gene expression
    • K. Kumar, and B. Agnew Capture and analysis of newly synthesized RNA - a novel enabling technology to study high resolution gene expression FASEB J. 24 2010 lb76
    • (2010) FASEB J. , vol.24 , pp. 76
    • Kumar, K.1    Agnew, B.2
  • 14
    • 33947141062 scopus 로고    scopus 로고
    • 5-Alkynyl-2′-deoxyuridines: Chromatography-free synthesis and cytotoxicity evaluation against human breast cancer cells
    • S. Meneni, I. Ott, C.D. Sergeant, A. Sniady, R. Gust, and R. Dembinski 5-Alkynyl-2′-deoxyuridines: chromatography-free synthesis and cytotoxicity evaluation against human breast cancer cells Bioorg. Med. Chem. 15 2007 3082 3088
    • (2007) Bioorg. Med. Chem. , vol.15 , pp. 3082-3088
    • Meneni, S.1    Ott, I.2    Sergeant, C.D.3    Sniady, A.4    Gust, R.5    Dembinski, R.6
  • 15
    • 0023598610 scopus 로고
    • Acetylenic nucleosides. 4. 1-beta-D-Arabinofuranosyl-5-ethynylcytosine: Improved synthesis and evaluation of biochemical and antiviral properties
    • M. Bobek, I. Kavai, R.A. Sharma, S. Grill, G. Dutschman, and Y.C. Cheng Acetylenic nucleosides. 4. 1-beta-D-Arabinofuranosyl-5-ethynylcytosine: improved synthesis and evaluation of biochemical and antiviral properties J. Med. Chem. 30 1987 2154 2157
    • (1987) J. Med. Chem. , vol.30 , pp. 2154-2157
    • Bobek, M.1    Kavai, I.2    Sharma, R.A.3    Grill, S.4    Dutschman, G.5    Cheng, Y.C.6
  • 16
    • 0014851361 scopus 로고
    • Studies of nucleosides and nucleotides. XLI. Purine cyclonucleosides. 8. Selective sulfonylation of 8-bromoadenosine derivatives and an alternate synthesis of 8,2′- and 8,3′-S-cyclonucleosides
    • M. Ikehara, and M. Kaneko Studies of nucleosides and nucleotides. XLI. Purine cyclonucleosides. 8. Selective sulfonylation of 8-bromoadenosine derivatives and an alternate synthesis of 8,2′- and 8,3′-S- cyclonucleosides Tetrahedron 26 1970 4251 4259
    • (1970) Tetrahedron , vol.26 , pp. 4251-4259
    • Ikehara, M.1    Kaneko, M.2
  • 17
  • 18
    • 33748590278 scopus 로고    scopus 로고
    • DNA duplexes stabilized by modified monomer residues: Synthesis and stability
    • D. Graham, J.A. Parkinson, and T. Brown DNA duplexes stabilized by modified monomer residues: synthesis and stability J. Chem. Soc. Perkin Trans. 1 1998 1131 1138
    • (1998) J. Chem. Soc. Perkin Trans. , vol.1 , pp. 1131-1138
    • Graham, D.1    Parkinson, J.A.2    Brown, T.3
  • 19
    • 0000978075 scopus 로고
    • Purine nucleosides. VII. Direct bromination of adenosine, deoxyadenosine, guanosine, and related purine nucleosides
    • R.E. Holmes, and R.K. Robins Purine nucleosides. VII. Direct bromination of adenosine, deoxyadenosine, guanosine, and related purine nucleosides J. Am. Chem. Soc. 86 1964 1242 1245
    • (1964) J. Am. Chem. Soc. , vol.86 , pp. 1242-1245
    • Holmes, R.E.1    Robins, R.K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.