-
1
-
-
34548704573
-
Ccaffeine framework: composing and debugging applications iteratively and running them statically
-
Sandia National Laboratories, Atlanta, GA
-
Allan B.A., Armstrong R. Ccaffeine framework: composing and debugging applications iteratively and running them statically. Compframe 2005 workshop 2005, Sandia National Laboratories, Atlanta, GA.
-
(2005)
Compframe 2005 workshop
-
-
Allan, B.A.1
Armstrong, R.2
-
2
-
-
33645980338
-
A component architecture for high-performance scientific computing
-
Allan B.A., Armstrong R., Bernholdt D.E., Bertrand F., Chiu K., Dahlgren T.L., Damevski K.B., Elwasif W.R., Govindaraju M., Katz D.S., Kohl J.A., Krishnan M., Larson J.W., Lefantzi S., Lewis M.J., Malony A.D., Mcinnes L.C., Nieplocha J., Norris B., Ray J., Windus T.L., Zhou S. A component architecture for high-performance scientific computing. Int. J. High-Perform. Comput. Appl. 2006, 20:163-202.
-
(2006)
Int. J. High-Perform. Comput. Appl.
, vol.20
, pp. 163-202
-
-
Allan, B.A.1
Armstrong, R.2
Bernholdt, D.E.3
Bertrand, F.4
Chiu, K.5
Dahlgren, T.L.6
Damevski, K.B.7
Elwasif, W.R.8
Govindaraju, M.9
Katz, D.S.10
Kohl, J.A.11
Krishnan, M.12
Larson, J.W.13
Lefantzi, S.14
Lewis, M.J.15
Malony, A.D.16
Mcinnes, L.C.17
Nieplocha, J.18
Norris, B.19
Ray, J.20
Windus, T.L.21
Zhou, S.22
more..
-
4
-
-
84896953126
-
Distributed multiscale computations using the MAPPER framework
-
2013 International Conference on Computational Science
-
Ben Belgacem M., Chopard B., Borgdorff J., Mamonski M., Rycerz K., Harezlak D. Distributed multiscale computations using the MAPPER framework. Proc. Comput. Sci. 2013, 18:1106-1115. 2013 International Conference on Computational Science.
-
(2013)
Proc. Comput. Sci.
, vol.18
, pp. 1106-1115
-
-
Ben Belgacem, M.1
Chopard, B.2
Borgdorff, J.3
Mamonski, M.4
Rycerz, K.5
Harezlak, D.6
-
5
-
-
84867496873
-
Coupling method for building a network of irrigation canals on a distributed computing environment
-
Springer-Verlag, Berlin, Heidelberg, G.C. Sirakoulis, S. Bandini (Eds.)
-
Ben Belgacem M., Chopard B., Parmigiani A. Coupling method for building a network of irrigation canals on a distributed computing environment. ACRI 2012 2012, 309-318. Springer-Verlag, Berlin, Heidelberg. G.C. Sirakoulis, S. Bandini (Eds.).
-
(2012)
ACRI 2012
, pp. 309-318
-
-
Ben Belgacem, M.1
Chopard, B.2
Parmigiani, A.3
-
6
-
-
84875413657
-
A distributed multiscale computation of a tightly coupled model using the multiscale modeling language
-
Borgdorff J., Bona-Casas C., Mamonski M., Kurowski K., Piontek T., Bosak B., Rycerz K., Ciepiela E., Gubała T., Harezlak D., Bubak M., Lorenz E., Hoekstra A.G. A distributed multiscale computation of a tightly coupled model using the multiscale modeling language. Proc. Comput. Sci. 2012, 9:596-605.
-
(2012)
Proc. Comput. Sci.
, vol.9
, pp. 596-605
-
-
Borgdorff, J.1
Bona-Casas, C.2
Mamonski, M.3
Kurowski, K.4
Piontek, T.5
Bosak, B.6
Rycerz, K.7
Ciepiela, E.8
Gubała, T.9
Harezlak, D.10
Bubak, M.11
Lorenz, E.12
Hoekstra, A.G.13
-
7
-
-
84893671761
-
Foundations of distributed multiscale computing: formalization, specification, and analysis
-
Borgdorff J., Falcone J.L., Lorenz E., Bona-Casas C., Chopard B., Hoekstra A.G. Foundations of distributed multiscale computing: formalization, specification, and analysis. J. Parallel Distrib. Comput. 2013, 73:465-483.
-
(2013)
J. Parallel Distrib. Comput.
, vol.73
, pp. 465-483
-
-
Borgdorff, J.1
Falcone, J.L.2
Lorenz, E.3
Bona-Casas, C.4
Chopard, B.5
Hoekstra, A.G.6
-
8
-
-
84856962849
-
A principled approach to distributed multiscale computing, from formalization to execution
-
IEEE Computer Society Press, Stockholm, Sweden
-
Borgdorff J., Falcone J.L., Lorenz E., Chopard B., Hoekstra A.G. A principled approach to distributed multiscale computing, from formalization to execution. Proceedings of the IEEE 7th International Conference on e-Science Workshops 2011, 97-104. IEEE Computer Society Press, Stockholm, Sweden.
-
(2011)
Proceedings of the IEEE 7th International Conference on e-Science Workshops
, pp. 97-104
-
-
Borgdorff, J.1
Falcone, J.L.2
Lorenz, E.3
Chopard, B.4
Hoekstra, A.G.5
-
9
-
-
84857705205
-
-
Bosak B., Komasa J., Kopta P., Kurowski K., Mamoński M., Piontek T. New capabilities in QosCosGrid middleware for advanced job management, advance reservation and co-allocation of computing resources-quantum chemistry application use case, Building a National Distributed e-Infrastructure-PL-Grid 2012, 40-55.
-
(2012)
New capabilities in QosCosGrid middleware for advanced job management, advance reservation and co-allocation of computing resources-quantum chemistry application use case, Building a National Distributed e-Infrastructure-PL-Grid
, pp. 40-55
-
-
Bosak, B.1
Komasa, J.2
Kopta, P.3
Kurowski, K.4
Mamoński, M.5
Piontek, T.6
-
10
-
-
79953069544
-
A complex automata approach for in-stent restenosis: two-dimensional multiscale modeling and simulations
-
Caiazzo A., Evans D.J.W., Falcone J.L., Hegewald J., Lorenz E., Stahl B., Wang D., Bernsdorf J., Chopard B., Gunn J., Hose D.R., Krafczyk M., Lawford P.V., Smallwood R.H., Walker D., Hoekstra A.G. A complex automata approach for in-stent restenosis: two-dimensional multiscale modeling and simulations. J. Comput. Sci. 2011, 2:9-17.
-
(2011)
J. Comput. Sci.
, vol.2
, pp. 9-17
-
-
Caiazzo, A.1
Evans, D.J.W.2
Falcone, J.L.3
Hegewald, J.4
Lorenz, E.5
Stahl, B.6
Wang, D.7
Bernsdorf, J.8
Chopard, B.9
Gunn, J.10
Hose, D.R.11
Krafczyk, M.12
Lawford, P.V.13
Smallwood, R.H.14
Walker, D.15
Hoekstra, A.G.16
-
11
-
-
84905964256
-
-
Center for Advanced Computing Research
-
Center for Advanced Computing Research Caltech, Pyre: A Python Framework 2005, http://www.cacr.caltech.edu/projects/pyre/.
-
(2005)
Caltech, Pyre: A Python Framework
-
-
-
12
-
-
84905994109
-
-
CERFACS
-
CERFACS OpenPALM 4.1.4 2013, http://www.cerfacs.fr/globc/PALM_WEB/.
-
(2013)
OpenPALM 4.1.4
-
-
-
13
-
-
79959303368
-
A framework for multiscale and multiscience modeling and numerical simulations
-
Springer-Verlag, Berlin, Heidelberg, C. Calude, J. Kari, I. Petre, G. Rozenberg (Eds.)
-
Chopard B., Falcone J.L., Hoekstra A.G., Borgdorff J. A framework for multiscale and multiscience modeling and numerical simulations. LNCS 6714 2011, 2-8. Springer-Verlag, Berlin, Heidelberg. C. Calude, J. Kari, I. Petre, G. Rozenberg (Eds.).
-
(2011)
LNCS 6714
, pp. 2-8
-
-
Chopard, B.1
Falcone, J.L.2
Hoekstra, A.G.3
Borgdorff, J.4
-
14
-
-
79951480475
-
Multi-scale modelling and simulation in systems biology
-
Dada J., Mendes P. Multi-scale modelling and simulation in systems biology. Integr. Biol. 2011, 86-96.
-
(2011)
Integr. Biol.
, pp. 86-96
-
-
Dada, J.1
Mendes, P.2
-
15
-
-
34548474934
-
Heterogeneous multiscale methods: a review
-
Engquist W.E.B., Li X., Ren W., Vanden-Eijnden E. Heterogeneous multiscale methods: a review. Commun. Comput. Phys. 2007, 2:367-450.
-
(2007)
Commun. Comput. Phys.
, vol.2
, pp. 367-450
-
-
Engquist, W.E.B.1
Li, X.2
Ren, W.3
Vanden-Eijnden, E.4
-
17
-
-
84870762360
-
Easy use of high performance computers for fusion simulations
-
Frauel Y., Coster D., Guillerminet B., Imbeaux F., Jackson A., Konz C., Owsiak M., Plociennik M., Scott B., Strand P. Easy use of high performance computers for fusion simulations. Fusion Eng. Des. 2012, 87:2057-2062.
-
(2012)
Fusion Eng. Des.
, vol.87
, pp. 2057-2062
-
-
Frauel, Y.1
Coster, D.2
Guillerminet, B.3
Imbeaux, F.4
Jackson, A.5
Konz, C.6
Owsiak, M.7
Plociennik, M.8
Scott, B.9
Strand, P.10
-
18
-
-
84905993027
-
-
Globus
-
Globus GridFTP 5.2 2012, http://www.globus.org/toolkit/data/gridftp/.
-
(2012)
GridFTP 5.2
-
-
-
19
-
-
84875429520
-
Flexible composition and execution of high performance, high fidelity multiscale biomedical simulations
-
Groen D., Borgdorff J., Bona-Casas C., Hetherington J., Nash R.W., Zasada S.J., Saverchenko I., Mamonski M., Kurowski K., Bernabeu M.O., Hoekstra A.G., Coveney P.V. Flexible composition and execution of high performance, high fidelity multiscale biomedical simulations. Interface Focus 2013, 3:20120087.
-
(2013)
Interface Focus
, vol.3
, pp. 20120087
-
-
Groen, D.1
Borgdorff, J.2
Bona-Casas, C.3
Hetherington, J.4
Nash, R.W.5
Zasada, S.J.6
Saverchenko, I.7
Mamonski, M.8
Kurowski, K.9
Bernabeu, M.O.10
Hoekstra, A.G.11
Coveney, P.V.12
-
20
-
-
78649785258
-
A lightweight communication library for distributed computing
-
Groen D., Rieder S., Grosso P., de Laat C., Portegies Zwart S. A lightweight communication library for distributed computing. Comput. Sci. Discov. 2010, 3:015002.
-
(2010)
Comput. Sci. Discov.
, vol.3
, pp. 015002
-
-
Groen, D.1
Rieder, S.2
Grosso, P.3
de Laat, C.4
Portegies Zwart, S.5
-
21
-
-
84899544935
-
Survey of multiscale and multiphysics applications and communities
-
(preprint)
-
Groen D., Zasada S.J., Coveney P.V. Survey of multiscale and multiphysics applications and communities. IEEE Comput. Sci. Eng 2013, (preprint). 10.1109/MCSE.2013.47.
-
(2013)
IEEE Comput. Sci. Eng
-
-
Groen, D.1
Zasada, S.J.2
Coveney, P.V.3
-
22
-
-
47749112520
-
An agent-based coupling platform for complex automata
-
Springer-Verlag, Berlin, Heidelberg
-
Hegewald J., Krafczyk M., Tölke J., Hoekstra A.G. An agent-based coupling platform for complex automata. ICCS 2008, LNCS 5102 2008, 227-233. Springer-Verlag, Berlin, Heidelberg.
-
(2008)
ICCS 2008, LNCS 5102
, pp. 227-233
-
-
Hegewald, J.1
Krafczyk, M.2
Tölke, J.3
Hoekstra, A.G.4
-
23
-
-
77954236691
-
Complex automata: multi-scale modeling with coupled cellular automata
-
Springer-Verlag, Berlin, Heidelberg, A.G. Hoekstra, J. Kroc, P.M.A. Sloot (Eds.)
-
Hoekstra A.G., Caiazzo A., Lorenz E., Falcone J.L. Complex automata: multi-scale modeling with coupled cellular automata. Simulating Complex Systems by Cellular Automata 2010, 29-57. Springer-Verlag, Berlin, Heidelberg. A.G. Hoekstra, J. Kroc, P.M.A. Sloot (Eds.).
-
(2010)
Simulating Complex Systems by Cellular Automata
, pp. 29-57
-
-
Hoekstra, A.G.1
Caiazzo, A.2
Lorenz, E.3
Falcone, J.L.4
-
24
-
-
39049138878
-
Toward a complex automata formalism for multiscale modeling
-
Hoekstra A.G., Lorenz E., Falcone J.L., Chopard B. Toward a complex automata formalism for multiscale modeling. Int. J. Multiscale Comput. Eng. 2007, 5:491-502.
-
(2007)
Int. J. Multiscale Comput. Eng.
, vol.5
, pp. 491-502
-
-
Hoekstra, A.G.1
Lorenz, E.2
Falcone, J.L.3
Chopard, B.4
-
26
-
-
2942716880
-
Challenges in multiscale modelling and its application to granulation systems
-
Ingram G.D., Cameron I.T. Challenges in multiscale modelling and its application to granulation systems. Dev. Chem. Eng. Mineral Process. 2004, 12:293-308.
-
(2004)
Dev. Chem. Eng. Mineral Process.
, vol.12
, pp. 293-308
-
-
Ingram, G.D.1
Cameron, I.T.2
-
27
-
-
2542507229
-
Classification and analysis of integrating frameworks in multiscale modelling
-
Ingram G.D., Cameron I.T., Hangos K.M. Classification and analysis of integrating frameworks in multiscale modelling. Chem. Eng. Sci. 2004, 59:2171-2187.
-
(2004)
Chem. Eng. Sci.
, vol.59
, pp. 2171-2187
-
-
Ingram, G.D.1
Cameron, I.T.2
Hangos, K.M.3
-
29
-
-
84949645954
-
The model coupling toolkit
-
Springer-Verlag, Berlin, Heidelberg, V.N. Alexandrov, J.J. Dongarra, B.A. Juliano, R.S. Renner, C.J.K. Tan (Eds.)
-
Larson J.W., Jacob R.L., Foster I., Guo J. The model coupling toolkit. ICCS 2001, LNCS 2073 2001, 185-194. Springer-Verlag, Berlin, Heidelberg. V.N. Alexandrov, J.J. Dongarra, B.A. Juliano, R.S. Renner, C.J.K. Tan (Eds.).
-
(2001)
ICCS 2001, LNCS 2073
, pp. 185-194
-
-
Larson, J.W.1
Jacob, R.L.2
Foster, I.3
Guo, J.4
-
32
-
-
84905970265
-
-
MessagePack
-
MessagePack Messagepack 0.6.6 2012, http://msgpack.org.
-
(2012)
Messagepack 0.6.6
-
-
-
33
-
-
77950361733
-
Multi-scale modelling in computational biomedicine
-
Sloot P.M.A., Hoekstra A.G. Multi-scale modelling in computational biomedicine. Brief. Bioinform. 2010, 11:142-152.
-
(2010)
Brief. Bioinform.
, vol.11
, pp. 142-152
-
-
Sloot, P.M.A.1
Hoekstra, A.G.2
-
34
-
-
43049085575
-
Multi-scale computational modelling in biology and physiology
-
Southern J., Pitt-Francis J., Whiteley J., Stokeley D., Kobashi H., Nobes R., Yoshimasa K., Gavaghan D. Multi-scale computational modelling in biology and physiology. Prog. Biophys. Mol. Biol. 2008, 60-89.
-
(2008)
Prog. Biophys. Mol. Biol.
, pp. 60-89
-
-
Southern, J.1
Pitt-Francis, J.2
Whiteley, J.3
Stokeley, D.4
Kobashi, H.5
Nobes, R.6
Yoshimasa, K.7
Gavaghan, D.8
-
37
-
-
30344481405
-
Reverse-engineering gene-regulatory networks using evolutionary algorithms and grid computing
-
Swain M., Hunniford T., Dubitzky W., Mandel J., Palfreyman N. Reverse-engineering gene-regulatory networks using evolutionary algorithms and grid computing. J. Clin. Monit. Comput. 2005, 19:329-337.
-
(2005)
J. Clin. Monit. Comput.
, vol.19
, pp. 329-337
-
-
Swain, M.1
Hunniford, T.2
Dubitzky, W.3
Mandel, J.4
Palfreyman, N.5
-
38
-
-
67349241218
-
An ontological conceptualization of multiscale models
-
Yang A., Marquardt W. An ontological conceptualization of multiscale models. Comput. Chem. Eng. 2009, 822-837.
-
(2009)
Comput. Chem. Eng.
, pp. 822-837
-
-
Yang, A.1
Marquardt, W.2
-
39
-
-
84871748153
-
Distributed infrastructure for multiscale computing
-
IEEE
-
Zasada S.J., Mamonski M., Groen D., Borgdorff J., Saverchenko I., Piontek T., Kurowski K., Coveney P.V. Distributed infrastructure for multiscale computing. 2012 IEEE/ACM 16th International Symposium on Distributed Simulation and Real Time Applications (DS-RT) 2012, 65-74. IEEE.
-
(2012)
2012 IEEE/ACM 16th International Symposium on Distributed Simulation and Real Time Applications (DS-RT)
, pp. 65-74
-
-
Zasada, S.J.1
Mamonski, M.2
Groen, D.3
Borgdorff, J.4
Saverchenko, I.5
Piontek, T.6
Kurowski, K.7
Coveney, P.V.8
|