메뉴 건너뛰기




Volumn 9, Issue 8, 2014, Pages

Prevalence of HPV 16 and HPV 18 lineages in Galicia, Spain

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; ARTICLE; CANCER GRADING; CANCER RISK; CASE CONTROL STUDY; CONTROLLED STUDY; FEMALE; GENE SEQUENCE; GENETIC VARIABILITY; HUMAN; HUMAN PAPILLOMAVIRUS TYPE 16; HUMAN PAPILLOMAVIRUS TYPE 18; MAJOR CLINICAL STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PREVALENCE; RISK FACTOR; SPAIN; TUMOR INVASION; UTERINE CERVIX CARCINOMA IN SITU; GENETICS; GENOTYPING TECHNIQUE; UTERINE CERVIX TUMOR; VIROLOGY;

EID: 84905862539     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0104678     Document Type: Article
Times cited : (25)

References (35)
  • 1
    • 64849105830 scopus 로고    scopus 로고
    • A review of human carcinogens - Part B: Biological agents
    • Bouvard V, Baan R, Straif K, Grosse Y, Secretan B, et al. (2009) A review of human carcinogens - Part B: biological agents. Lancet Oncol 10: 321-322.
    • (2009) Lancet Oncol , vol.10 , pp. 321-322
    • Bouvard, V.1    Baan, R.2    Straif, K.3    Grosse, Y.4    Secretan, B.5
  • 3
    • 84864012296 scopus 로고    scopus 로고
    • Human papillomavirus type 16 genetic variants: Phylogeny and classification based on E6 and LCR
    • doi:10.1128/JVI.00483-12
    • Cornet I, Gheit T, Franceschi S, Vignat J, Burk RD, et al. (2012) Human papillomavirus type 16 genetic variants: phylogeny and classification based on E6 and LCR. J Virol 86: 6855-6861. doi:10.1128/JVI.00483-12.
    • (2012) J Virol , vol.86 , pp. 6855-6861
    • Cornet, I.1    Gheit, T.2    Franceschi, S.3    Vignat, J.4    Burk, R.D.5
  • 4
    • 84884355784 scopus 로고    scopus 로고
    • Human papillomavirus genome variants
    • doi:10.1016/j.virol.2013.07.018
    • Burk RD, Harari A, Chen Z (2013) Human papillomavirus genome variants. Virology 445: 232-243. doi:10.1016/j.virol.2013.07.018.
    • (2013) Virology , vol.445 , pp. 232-243
    • Burk, R.D.1    Harari, A.2    Chen, Z.3
  • 5
    • 59749083343 scopus 로고    scopus 로고
    • Evolutionary dynamics of variant genomes of human papillomavirus types 18, 45, and 97
    • doi:10.1128/JVI.02068-08
    • Chen Z, DeSalle R, Schiffman M, Herrero R, Burk RD (2009) Evolutionary dynamics of variant genomes of human papillomavirus types 18, 45, and 97. J Virol 83: 1443-1455. doi:10.1128/JVI.02068-08.
    • (2009) J Virol , vol.83 , pp. 1443-1455
    • Chen, Z.1    DeSalle, R.2    Schiffman, M.3    Herrero, R.4    Burk, R.D.5
  • 6
    • 84868240115 scopus 로고    scopus 로고
    • Human Papillomavirus (HPV) genotype 18 variants in patients with clinical manifestations of HPV related infections in Bilbao, Spain
    • doi:10.1186/1743-422X-9-258
    • Arroyo SL, Basaras M, Arrese E, Hernáez S, Andía D, et al. (2012) Human Papillomavirus (HPV) genotype 18 variants in patients with clinical manifestations of HPV related infections in Bilbao, Spain. Virol J 9: 258. doi:10.1186/1743-422X-9-258.
    • (2012) Virol J , vol.9 , pp. 258
    • Arroyo, S.L.1    Basaras, M.2    Arrese, E.3    Hernáez, S.4    Andía, D.5
  • 8
    • 84872612850 scopus 로고    scopus 로고
    • HPV16 genetic variation and the development of cervical cancer worldwide
    • doi:10.1038/bjc.2012.508
    • Cornet I, Gheit T, Iannacone MR, Vignat J, Sylla BS, et al. (2013) HPV16 genetic variation and the development of cervical cancer worldwide. Br J Cancer 108: 240-244. doi:10.1038/bjc.2012.508.
    • (2013) Br J Cancer , vol.108 , pp. 240-244
    • Cornet, I.1    Gheit, T.2    Iannacone, M.R.3    Vignat, J.4    Sylla, B.S.5
  • 9
    • 79959542447 scopus 로고    scopus 로고
    • Risks for persistence and progression by human papillomavirus type 16 variant lineages among a population-based sample of Danish women
    • doi:10.1158/1055-9965.EPI-10-1187
    • Gheit T, Cornet I, Clifford GM, Iftner T, Munk C, et al. (2011) Risks for persistence and progression by human papillomavirus type 16 variant lineages among a population-based sample of Danish women. Cancer Epidemiol Biomarkers Prev 20: 1315-1321. doi:10.1158/1055-9965.EPI-10-1187.
    • (2011) Cancer Epidemiol Biomarkers Prev , vol.20 , pp. 1315-1321
    • Gheit, T.1    Cornet, I.2    Clifford, G.M.3    Iftner, T.4    Munk, C.5
  • 10
    • 77951027069 scopus 로고    scopus 로고
    • A population-based prospective study of carcinogenic human papillomavirus variant lineages, viral persistence, and cervical neoplasia
    • doi:10.1158/0008-5472.CAN-09-4179
    • Schiffman M, Rodriguez AC, Chen Z, Wacholder S, Herrero R, et al. (2010) A population-based prospective study of carcinogenic human papillomavirus variant lineages, viral persistence, and cervical neoplasia. Cancer Res 70: 3159-3169. doi:10.1158/0008-5472.CAN-09-4179.
    • (2010) Cancer Res , vol.70 , pp. 3159-3169
    • Schiffman, M.1    Rodriguez, A.C.2    Chen, Z.3    Wacholder, S.4    Herrero, R.5
  • 12
    • 79959563617 scopus 로고    scopus 로고
    • Sequence imputation of HPV16 genomes for genetic association studies
    • doi:10.1371/journal.pone.0021375
    • Smith B, Chen Z, Reimers L, van Doorslaer K, Schiffman M, et al. (2011) Sequence imputation of HPV16 genomes for genetic association studies. PLoS ONE 6: e21375. doi:10.1371/journal.pone.0021375.
    • (2011) PLoS ONE , vol.6
    • Smith, B.1    Chen, Z.2    Reimers, L.3    Van Doorslaer, K.4    Schiffman, M.5
  • 13
    • 79952817282 scopus 로고    scopus 로고
    • Human papillomavirus (HPV) genotypes and HPV16 variants and risk of adenocarcinoma and squamous cell carcinoma of the cervix
    • doi:10.1016/j.ygyno.2010.12.005
    • Tornesello ML, Losito S, Benincasa G, Fulciniti F, Botti G, et al. (2011) Human papillomavirus (HPV) genotypes and HPV16 variants and risk of adenocarcinoma and squamous cell carcinoma of the cervix. Gynecol Oncol 121: 32-42. doi:10.1016/j.ygyno.2010.12.005.
    • (2011) Gynecol Oncol , vol.121 , pp. 32-42
    • Tornesello, M.L.1    Losito, S.2    Benincasa, G.3    Fulciniti, F.4    Botti, G.5
  • 18
    • 0023116091 scopus 로고
    • Nucleotide sequence and comparative analysis of the human papillomavirus type 18 genome. Phylogeny of papillomaviruses and repeated structure of the E6 and E7 gene products
    • DOI 10.1016/0022-2836(87)90343-3
    • Cole ST, Danos O (1987) Nucleotide sequence and comparative analysis of the human papillomavirus type 18 genome. Phylogeny of papillomaviruses and repeated structure of the E6 and E7 gene products. J Mol Biol 193: 599-608. (Pubitemid 17020067)
    • (1987) Journal of Molecular Biology , vol.193 , Issue.4 , pp. 599-608
    • Cole, S.T.1    Danos, O.2
  • 19
    • 0003518435 scopus 로고    scopus 로고
    • Human papillomaviruses 1997: A compilation and analysis of nucleic acid and amino acid sequences
    • (n.d.) 3rd edition.
    • Myers G (n.d.) Human papillomaviruses 1997: a compilation and analysis of nucleic acid and amino acid sequences. 3rd edition. Los Alamos (NM): Theoretical Biology and Biophysics.
    • Los Alamos (NM): Theoretical Biology and Biophysics
    • Myers, G.1
  • 20
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp 41: 95-98.
    • (1999) Nucleic Acids Symp , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 21
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680. (Pubitemid 24354800)
    • (1994) Nucleic Acids Research , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 22
    • 84899553363 scopus 로고    scopus 로고
    • RAxML version 8: A tool for phylogenetic analysis and postanalysis of large phylogenies
    • doi:10.1093/bioinformatics/btu033
    • Stamatakis A (2014) RAxML version 8: a tool for phylogenetic analysis and postanalysis of large phylogenies. Bioinformatics. doi:10.1093/bioinformatics/ btu033.
    • (2014) Bioinformatics.
    • Stamatakis, A.1
  • 23
    • 0031060050 scopus 로고    scopus 로고
    • Human papillomavirus type 16 sequence variants: Identification by E6 and L1 lineage-specific hybridization
    • Wheeler CM, Yamada T, Hildesheim A, Jenison SA (1997) Human papillomavirus type 16 sequence variants: identification by E6 and L1 lineagespecific hybridization. J Clin Microbiol 35: 11-19. (Pubitemid 26422621)
    • (1997) Journal of Clinical Microbiology , vol.35 , Issue.1 , pp. 11-19
    • Wheeler, C.M.1    Yamada, T.2    Hildesheim, A.3    Jenison, S.A.4
  • 24
    • 20644460585 scopus 로고    scopus 로고
    • Human papillomavirus type 18 variant lineages in United States populations characterized by sequence analysis of LCR-E6, E2, and L1regions
    • DOI 10.1016/j.virol.2005.04.022, PII S0042682205002588
    • Arias-Pulido H, Peyton CL, Torrez-Martínez N, Anderson DN, Wheeler CM (2005) Human papillomavirus type 18 variant lineages in United States populations characterized by sequence analysis of LCR-E6, E2, and L1 regions. Virology 338: 22-34. doi:10.1016/j.virol.2005.04.022. (Pubitemid 40835923)
    • (2005) Virology , vol.338 , Issue.1 , pp. 22-34
    • Arias-Pulido, H.1    Peyton, C.L.2    Torrez-Martinez, N.3    Anderson, D.N.4    Wheeler, C.M.5
  • 25
    • 77950189667 scopus 로고    scopus 로고
    • HPV genotyping and HPV16 variant analysis in glandular and squamous neoplastic lesions of the uterine cervix
    • doi:10.1016/j.ygyno.2010.02.003
    • Quint KD, de Koning MNC, van Doorn L-J, Quint WGV, Pirog EC (2010) HPV genotyping and HPV16 variant analysis in glandular and squamous neoplastic lesions of the uterine cervix. Gynecol Oncol 117: 297-301. doi:10.1016/j.ygyno. 2010.02.003.
    • (2010) Gynecol Oncol , vol.117 , pp. 297-301
    • Quint, K.D.1    De Koning, M.N.C.2    Van Doorn, L.-J.3    Quint, W.G.V.4    Pirog, E.C.5
  • 27
    • 70350721798 scopus 로고    scopus 로고
    • Association of HPV16 E6 variants with diagnostic severity in cervical cytology samples of 354 women in a US population
    • doi:10.1002/ijc.24706
    • Zuna RE, Moore WE, Shanesmith RP, Dunn ST, Wang SS, et al. (2009) Association of HPV16 E6 variants with diagnostic severity in cervical cytology samples of 354 women in a US population. Int J Cancer 125: 2609-2613. doi:10.1002/ijc.24706.
    • (2009) Int J Cancer , vol.125 , pp. 2609-2613
    • Zuna, R.E.1    Moore, W.E.2    Shanesmith, R.P.3    Dunn, S.T.4    Wang, S.S.5
  • 28
    • 79954617441 scopus 로고    scopus 로고
    • A novel real-time genotyping assay for detection of the E6-350G HPV 16 variant
    • doi:10.1016/j.jviromet.2011.03.010
    • Perez S, Cid A, Araujo A, Lamas MJ, Saran MT, et al. (2011) A novel real-time genotyping assay for detection of the E6-350G HPV 16 variant. J Virol Methods 173: 357-363. doi:10.1016/j.jviromet.2011.03.010.
    • (2011) J Virol Methods , vol.173 , pp. 357-363
    • Perez, S.1    Cid, A.2    Araujo, A.3    Lamas, M.J.4    Saran, M.T.5
  • 32
    • 84892714775 scopus 로고    scopus 로고
    • Longterm follow-up of HPV16-positive women: Persistence of the same genetic variant and low prevalence of variant co-infections
    • doi:10.1371/journal.pone.0080382
    • Geraets DT, van Doorn L-J, Kleter B, Colau B, Harper DM, et al. (2013) Longterm follow-up of HPV16-positive women: persistence of the same genetic variant and low prevalence of variant co-infections. PLoS ONE 8: e80382.doi:10.1371/journal.pone.0080382.
    • (2013) PLoS ONE , vol.8
    • Geraets, D.T.1    Van Doorn, L.-J.2    Kleter, B.3    Colau, B.4    Harper, D.M.5
  • 33
    • 84870344500 scopus 로고    scopus 로고
    • Differential presence of papillomavirus variants in cervical cancer: An analysis for HPV33, HPV45 and HPV58
    • doi:10.1016/j.meegid.2012.09.011
    • Godínez JM, Heideman DAM, Gheit T, Alemany L, Snijders PJF, et al. (2013) Differential presence of papillomavirus variants in cervical cancer: an analysis for HPV33, HPV45 and HPV58. Infect Genet Evol 13: 96-104. doi:10.1016/j.meegid.2012.09.011.
    • (2013) Infect Genet Evol , vol.13 , pp. 96-104
    • Godínez, J.M.1    Heideman, D.A.M.2    Gheit, T.3    Alemany, L.4    Snijders, P.J.F.5
  • 34
    • 33645955251 scopus 로고    scopus 로고
    • Oncogenic human papillomavirus (HPV) type distribution and HPV type 16 E6 variants in two Spanish population groups with different levels of HPV infection risk
    • doi:10.1128/JCM.44.4.1428-1434.2006
    • Ortiz M, Torres M, Muñoz L, Fernández-García E, Canals J, et al. (2006) Oncogenic human papillomavirus (HPV) type distribution and HPV type 16 E6 variants in two Spanish population groups with different levels of HPV infection risk. J Clin Microbiol 44: 1428-1434. doi:10.1128/JCM.44.4.1428-1434.2006.
    • (2006) J Clin Microbiol , vol.44 , pp. 1428-1434
    • Ortiz, M.1    Torres, M.2    Muñoz, L.3    Fernández-García, E.4    Canals, J.5
  • 35
    • 0034955154 scopus 로고    scopus 로고
    • Human papillomavirus-16 E6 variants in cervical squamous intraepithelial lesions from HIV-negative and HIV-positive women
    • doi:10.1309/42U5-Q2EV-RCBM-WPGJ
    • Pérez-Gallego L, Moreno-Bueno G, Sarrió D, Suárez A, Gamallo C, et al. (2001) Human papillomavirus-16 E6 variants in cervical squamous intraepithelial lesions from HIV-negative and HIV-positive women. Am J Clin Pathol 116: 143-148. doi:10.1309/42U5-Q2EV-RCBM-WPGJ.
    • (2001) Am J Clin Pathol , vol.116 , pp. 143-148
    • Pérez-Gallego, L.1    Moreno-Bueno, G.2    Sarrió, D.3    Suárez, A.4    Gamallo, C.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.