Sequential expression of long noncoding RNA as mRNA gene expression in specific stages of mouse spermatogenesis

Scientific Reports

Volumn 4, Issue , 2014, Pages

  Liang, Meng ^a,b   Li, Wenqing ^a,c   Tian, Hui ^a   Hu, Tao ^a   Wang, Lu ^a   Lin, Yu ^a   Li, Yulei ^a   Huang, Hefeng ^a   Sun, Fei ^a  

^a SHANGHAI JIAO TONG UNIVERSITY   (China)

^b BENGBU MEDICAL COLLEGE   (China)

^c ANHUI MEDICAL UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

GENETIC MARKER; LONG UNTRANSLATED RNA; MESSENGER RNA;

ADULT STEM CELL; ANIMAL; C57BL MOUSE; CYTOLOGY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETIC MARKER; GENETICS; GROWTH, DEVELOPMENT AND AGING; MALE; METABOLISM; MICROARRAY ANALYSIS; MOUSE; SPERMATID; SPERMATOCYTE; SPERMATOGENESIS; SPERMATOGONIUM;

ADULT STEM CELLS; ANIMALS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENETIC MARKERS; MALE; MICE; MICE, INBRED C57BL; MICROARRAY ANALYSIS; RNA, LONG NONCODING; RNA, MESSENGER; SPERMATIDS; SPERMATOCYTES; SPERMATOGENESIS; SPERMATOGONIA;

EID: 84905714772     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep05966     Document Type: Article

References (41)

1. Eddy, E. M. Male germ cell gene expression. Recent Prog Horm Res 57, 103-128 (2002
2. Hecht, N. B. Molecular mechanisms of male germ cell differentiation. Bioessays 20, 555-561 (1998 (Pubitemid 28362301)
3. Iguchi, N., Tobias, J.W. & Hecht, N. B. Expression profiling reveals meiotic male germ cell mRNAs that are translationally up- and down-regulated. PNatl Acad Sci USA 103, 7712-7717 (2006
4. Schultz, N.,Hamra, F. K. & Garbers, D. L. Amultitude of genes expressed solely in meiotic or postmeiotic spermatogenic cells offers a myriad of contraceptive targets. P Natl Acad Sci USA 100, 12201-12206 (2003 (Pubitemid 37271538)
5. Almstrup, K. et al. Analysis of cell-type-specific gene expression during mouse spermatogenesis. Biol Reprod 70, 1751-1761 (2004 (Pubitemid 38715631)
6. Shima, J. E., McLean, D. J., McCarrey, J. R. & Griswold, M. D. The murine testicular transcriptome: Characterizing gene expression in the testis during the progression of spermatogenesis. Biol Reprod 71, 319-330 (2004 (Pubitemid 38915339)
7. Schlecht, U. et al. Expression profiling of mammalian male meiosis and gametogenesis identifies novel candidate genes for roles in the regulation of fertility. Mol Biol Cell 15, 1031-1043 (2004 (Pubitemid 38316214)
8. Amaral, P. P. & Mattick, J. S. Noncoding RNA in development. Mamm Genome 19, 454-492 (2008
9. Hayashi, K. et al. MicroRNA Biogenesis Is Required for Mouse Primordial Germ Cell Development and Spermatogenesis. PLoS One 3 (2008
10. Gan, H. Y. et al. piRNA profiling during specific stages of mouse spermatogenesis. RNA 17, 1191-1203 (2011
11. Djebali, S. et al. Landscape of transcription in human cells. Nature 489, 101-108 (2012
12. Esteller, M. Non-coding RNAs in human disease. Nat Rev Genet 12, 861-874 (2011
13. Yu,W. et al. Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA. Nature 451, 202-206 (2008
14. Zhao, J., Sun, B. K., Erwin, J. A., Song, J. J. & Lee, J. T. Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome. Science 322, 750-756 (2008
15. Pandey, R. R. et al. Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation. Mol Cell 32, 232-246 (2008
16. Sleutels, F., Zwart, R. & Barlow, D. P. The non-coding Air RNA is required for silencing autosomal imprinted genes. Nature 415, 810-813 (2002 (Pubitemid 34150505)
17. Heo, J. B. & Sung, S. Vernalization-Mediated Epigenetic Silencing by a Long Intronic Noncoding RNA. Science 331, 76-79 (2011
18. Rinn, J. L., Bondre, C., Gladstone, H. B., Brown, P. O. & Chang, H. Y. Anatomic demarcation by positional variation in fibroblast gene expression programs. PLoS Genet 2, e119 (2006
19. Lee, J. T. & Bartolomei, M. S. X-inactivation, imprinting, and long noncoding RNAs in health and disease. Cell 152, 1308-1323 (2013
20. Ponting, C. P., Oliver, P. L. & Reik, W. Evolution and functions of long noncoding RNAs. Cell 136, 629-641 (2009
21. Sun, J., Lin, Y. & Wu, J. Long Non-Coding RNA Expression Profiling of Mouse Testis during Postnatal Development. PLoS One 8, e75750 (2013
22. Bao, J., Wu, J., Schuster, A. S., Hennig, G. W. & Yan, W. Expression profiling reveals developmentally regulated lncRNA repertoire in the mouse male germline. Biol Reprod 89, 107 (2013
23. Hermo, L., Pelletier, R. M., Cyr, D. G. & Smith, C. E. Surfing the wave, cycle, life history, and genes/proteins expressed by testicular germ cells. Part 1: Background to spermatogenesis, spermatogonia, and spermatocytes. Microsc Res Techniq 73, 241-278 (2010
24. Hermann, B. P. et al.Molecular dissection of the male germ cell lineage identifies putative spermatogonial stem cells in rhesus macaques. Hum Reprod 24, 1704-1716 (2009
25. Niu, Z. et al. MicroRNA-21 regulates the self-renewal of mouse spermatogonial stem cells. P Natl Acad Sci USA 108, 12740-12745 (2011
26. Sabour, D. et al. Identification of genes specific to mouse primordial germ cells through dynamic global gene expression. Hum Mol Genet 20, 115-125 (2011
27. He, Z. et al.MiRNA-20 and mirna-106a regulate spermatogonial stem cell renewal at the post-transcriptional level via targeting STAT3 and Ccnd1. Stem Cells 31, 2205-2217 (2013
28. Poliseno, L. et al.Acoding-independent function of gene and pseudogene mRNAs regulates tumour biology. Nature 465, 1033-1038 (2010
29. Wang, K. C.&Chang, H. Y. Molecular mechanisms of long noncoding RNAs. Mol Cell 43, 904-914 (2011
30. Don, J. & Stelzer, G. The expanding family of CREB/CREM transcription factors that are involved with spermatogenesis. Mol Cell Endocrinol 187, 115-124 (2002 (Pubitemid 34436939)
31. Bao, J., Wu, J., Schuster, A. S., Hennig, G. W. & Yan, W. Expression Profiling Reveals Developmentally Regulated lncRNA Repertoire in the Mouse Male Germline. Biol Reprod 89, 5 (2013
32. Sigova, A. A. et al. Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells. P Natl Acad Sci USA 110, 2876-2881 (2013
33. Laiho, A., Kotaja, N., Gyenesei, A. & Sironen, A. Transcriptome profiling of the murine testis during the first wave of spermatogenesis. PLoS One 8, e61558 (2013
34. He, Z. et al. Isolation of human male germ-line stem cells using enzymatic digestion and magnetic-activated cell sorting. Methods Mol Biol 825, 45-57 (2012
35. Romrell, L. J., Bellve, A. R. & Fawcett, D.W. Separation of mouse spermatogenic cells by sedimentation velocity. A morphological characterization. Dev Biol 49, 119-131 (1976
36. Bellve, A. R.,Millette, C. F., Bhatnagar, Y. M. & O'Brien, D. A. Dissociation of the mouse testis and characterization of isolated spermatogenic cells. J Histochem Cytochem 25, 480-494 (1977 (Pubitemid 8185293)
37. Yao, G. et al. MicroRNA-224 is involved in the regulation of mouse cumulus expansion by targeting Ptx3. Mol Cell Endocrinol 382, 244-253 (2014
38. Liang, M. et al. Transcriptional cooperation between p53 and NF-kappaB p65 regulates microRNA-224 transcription in mouse ovarian granulosa cells. Mol Cell Endocrinol 370, 119-129 (2013
39. Livak, K. J. & Schmittgen, T. D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 25, 402-408 (2001 (Pubitemid 34164012)
40. He, Z., Jiang, J., Hofmann, M. C. & Dym, M. Gfra1 silencing in mouse spermatogonial stem cells results in their differentiation via the inactivation of RET tyrosine kinase. Biol Reprod 77, 723-733 (2007 (Pubitemid 47494388)
41. Gan, H. et al. piRNA profiling during specific stages of mouse spermatogenesis. RNA 17, 1191-1203 (2011).