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Volumn 38, Issue SUPPL.1, 2014, Pages

Pathway analysis approaches for rare and common variants: Insights from genetic analysis workshop 18

Author keywords

Family studies; Hypertension; Pathway analysis; Whole genome sequence

Indexed keywords

ARTICLE; FAMILY STUDY; FOLLOW UP; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC VARIABILITY; GENOTYPE; HUMAN; MOLECULAR GENETICS; PHENOTYPE; UNITED STATES;

EID: 84905714207     PISSN: 07410395     EISSN: 10982272     Source Type: Journal    
DOI: 10.1002/gepi.21831     Document Type: Article
Times cited : (10)

References (26)
  • 3
    • 85018193467 scopus 로고    scopus 로고
    • Pathway-based analysis of rare and common variants to test for association with blood pressure
    • Alsulami H, Liu X, Beyene J. 2014. Pathway-based analysis of rare and common variants to test for association with blood pressure. BMC Proc 8(Suppl 1):S101.
    • (2014) BMC Proc , vol.8 , Issue.SUPPL. 1
    • Alsulami, H.1    Liu, X.2    Beyene, J.3
  • 7
    • 85018193005 scopus 로고    scopus 로고
    • Pathway analysis for genetic association studies: To do or not to do, that is the question
    • Dufresne L, Oualkacha K, Forgetta V, Greenwood CMT. 2014. Pathway analysis for genetic association studies: To do or not to do, that is the question. BMC Proc 8(Suppl 1):S103.
    • (2014) BMC Proc , vol.8 , Issue.SUPPL. 1
    • Dufresne, L.1    Oualkacha, K.2    Forgetta, V.3    Greenwood, C.M.T.4
  • 8
    • 85018192877 scopus 로고    scopus 로고
    • Integrated statistical and pathway approach to next-generation sequencing analysis: a family-based study of hypertension
    • Edwards J, Atlas S, Wilson S, Cooper C, Luo L, Stidley C. 2014. Integrated statistical and pathway approach to next-generation sequencing analysis: a family-based study of hypertension. BMC Proc 8(Suppl 1):S104.
    • (2014) BMC Proc , vol.8 , Issue.SUPPL. 1
    • Edwards, J.1    Atlas, S.2    Wilson, S.3    Cooper, C.4    Luo, L.5    Stidley, C.6
  • 9
    • 84865790047 scopus 로고    scopus 로고
    • An integrated encyclopedia of DNA elements in the human genome
    • ENCODE Project Consortium.
    • ENCODE Project Consortium. 2012. An integrated encyclopedia of DNA elements in the human genome. Nature 489:57-74.
    • (2012) Nature , vol.489 , pp. 57-74
  • 10
    • 85018192768 scopus 로고    scopus 로고
    • Application of family-based tests of association for rare variants to pathways
    • Greco B, Luedtke A, Hainline A, Alvarez C, Beck A, Tintle NL. 2014. Application of family-based tests of association for rare variants to pathways. BMC Proc 8(Suppl 1):S105.
    • (2014) BMC Proc , vol.8 , Issue.SUPPL. 1
    • Greco, B.1    Luedtke, A.2    Hainline, A.3    Alvarez, C.4    Beck, A.5    Tintle, N.L.6
  • 11
    • 85018193137 scopus 로고    scopus 로고
    • Dynamic pathway analysis of genes associated with blood pressure using whole-genome sequence data
    • Hu P, Paterson AD. 2014. Dynamic pathway analysis of genes associated with blood pressure using whole-genome sequence data. BMC Proc 8(Suppl 1):S105.
    • (2014) BMC Proc , vol.8 , Issue.SUPPL. 1
    • Hu, P.1    Paterson, A.D.2
  • 12
    • 82455170512 scopus 로고    scopus 로고
    • Pathway-based joint effects analysis of rare genetic variants using Genetic Analysis Workshop 17 exon sequence data
    • Hu P, Xu W, Cheng L, Xing X, Paterson AD. 2011. Pathway-based joint effects analysis of rare genetic variants using Genetic Analysis Workshop 17 exon sequence data. BMC Proc 5(Suppl 9):S45.
    • (2011) BMC Proc , vol.5 , Issue.SUPPL. 9
    • Hu, P.1    Xu, W.2    Cheng, L.3    Xing, X.4    Paterson, A.D.5
  • 13
    • 10344251533 scopus 로고    scopus 로고
    • Highly conserved upstream sequences for transcription factor genes and implications for the regulatory network
    • Iwama H, Gojobori T. 2004. Highly conserved upstream sequences for transcription factor genes and implications for the regulatory network. Proc Natl Acad Sci USA 101(49):17156-17161.
    • (2004) Proc Natl Acad Sci USA , vol.101 , Issue.49 , pp. 17156-17161
    • Iwama, H.1    Gojobori, T.2
  • 14
  • 15
    • 84861123691 scopus 로고    scopus 로고
    • Ten years of pathway analysis: Current approaches and outstanding challenges
    • Khatri P, Sirota M, Butte AJ. 2012. Ten years of pathway analysis: Current approaches and outstanding challenges. PLoS Comput Biol 8(2):e1002375.
    • (2012) PLoS Comput Biol , vol.8 , Issue.2
    • Khatri, P.1    Sirota, M.2    Butte, A.J.3
  • 16
    • 84876409686 scopus 로고    scopus 로고
    • A geometric framework for evaluating rare variant tests of association
    • Liu K, Fast S, Zawistowski M, Tintle NL. 2013. A geometric framework for evaluating rare variant tests of association. Genet Epidemiol 37(4):345-357.
    • (2013) Genet Epidemiol , vol.37 , Issue.4 , pp. 345-357
    • Liu, K.1    Fast, S.2    Zawistowski, M.3    Tintle, N.L.4
  • 19
    • 84878609902 scopus 로고    scopus 로고
    • Assessing methods for assigning SNPs to genes in gene-based tests of association using common variants
    • Petersen A, Alvarez C, De Claire S, Tintle NL. 2013. Assessing methods for assigning SNPs to genes in gene-based tests of association using common variants. PLoS One 8(5):e62161.
    • (2013) PLoS One , vol.8 , Issue.5
    • Petersen, A.1    Alvarez, C.2    De Claire, S.3    Tintle, N.L.4
  • 20
    • 82455173871 scopus 로고    scopus 로고
    • Evaluating methods for combining rare variant data in pathway-based tests of genetic association
    • Petersen A, Sitarik A, Luedtke A, Powers S, Bekmetjev A, Tintle NL. 2011. Evaluating methods for combining rare variant data in pathway-based tests of genetic association. BMC Proc 5(Suppl 9):S48.
    • (2011) BMC Proc , vol.5 , Issue.SUPPL. 9
    • Petersen, A.1    Sitarik, A.2    Luedtke, A.3    Powers, S.4    Bekmetjev, A.5    Tintle, N.L.6
  • 21
    • 84862499271 scopus 로고    scopus 로고
    • Pathway analysis of genomic data: Concepts, methods, and prospects for future development
    • Ramanan V, Shen L, Moore J, Saykin A. 2012. Pathway analysis of genomic data: Concepts, methods, and prospects for future development. Tr Genet 28(7):323-332.
    • (2012) Tr Genet , vol.28 , Issue.7 , pp. 323-332
    • Ramanan, V.1    Shen, L.2    Moore, J.3    Saykin, A.4
  • 24
    • 82455175499 scopus 로고    scopus 로고
    • Inflated type I error rates when using aggregation methods to analyze rare variants in the 1000 Genomes Project exon sequencing data in unrelated individuals: Summary results from Group 7 at Genetic Analysis Workshop 17
    • Tintle N, Aschard H, Hu I, Nock N, Wang H, Pugh E. 2011. Inflated type I error rates when using aggregation methods to analyze rare variants in the 1000 Genomes Project exon sequencing data in unrelated individuals: Summary results from Group 7 at Genetic Analysis Workshop 17. Genet Epidemiol 35(Suppl 1):S56-S60.
    • (2011) Genet Epidemiol , vol.35 , Issue.SUPPL. 1
    • Tintle, N.1    Aschard, H.2    Hu, I.3    Nock, N.4    Wang, H.5    Pugh, E.6
  • 25
    • 26444496137 scopus 로고    scopus 로고
    • Adjusting for treatment effects in studies of quantitative traits: Antihypertensive therapy and systolic blood pressure
    • Tobin MD, Sheehan NA, Scurrah KJ, Burton PR. 2005. Adjusting for treatment effects in studies of quantitative traits: Antihypertensive therapy and systolic blood pressure. Stat Med 24(19):2911-2935.
    • (2005) Stat Med , vol.24 , Issue.19 , pp. 2911-2935
    • Tobin, M.D.1    Sheehan, N.A.2    Scurrah, K.J.3    Burton, P.R.4
  • 26
    • 82455199545 scopus 로고    scopus 로고
    • Enrichment analysis of genetic association in genes and pathways by aggregating signals from both rare and common variants
    • Yang W, Gu C. 2011. Enrichment analysis of genetic association in genes and pathways by aggregating signals from both rare and common variants. BMC Proc 5(Suppl 9):S52.
    • (2011) BMC Proc , vol.5 , Issue.SUPPL. 9
    • Yang, W.1    Gu, C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.