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Volumn , Issue SUPPL.45, 2014, Pages

Using SomaticSniper to detect somatic single nucleotide variants

Author keywords

Next generation sequencing; Somatic variant calling; SomaticSniper

Indexed keywords

BIOLOGY; INTERNET; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 84905696562     PISSN: 19343396     EISSN: 1934340X     Source Type: Journal    
DOI: 10.1002/0471250953.bi1505s45     Document Type: Article
Times cited : (4)

References (10)
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    • Christoforides, A., Carpten, J.D., Weiss, G.J., Demeure, M.J., Von Hoff, D.D., and Craig, D.W. 2013. Identification of somatic mutations in cancer through Bayesian-based analysis of sequenced genome pairs. BMC Genomics 14:302.
    • (2013) BMC Genomics , vol.14 , pp. 302
    • Christoforides, A.1    Carpten, J.D.2    Weiss, G.J.3    Demeure, M.J.4    Von Hoff, D.D.5    Craig, D.W.6
  • 5
    • 80054915847 scopus 로고    scopus 로고
    • A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
    • Li, H. 2011. A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data. Bioinformatics 27:2987- 2993.
    • (2011) Bioinformatics , vol.27
    • Li, H.1
  • 6
    • 55549097836 scopus 로고    scopus 로고
    • Mapping short DNA sequencing reads and calling variants using mapping quality scores
    • Li, H., Ruan, J., and Durbin, R. 2008. Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res. 18:1851-1858.
    • (2008) Genome Res. , vol.18 , pp. 1851-1858
    • Li, H.1    Ruan, J.2    Durbin, R.3
  • 9
    • 84864153492 scopus 로고    scopus 로고
    • Strelka: accurate somatic small-variant calling from sequenced tumor-normal sample pairs
    • Saunders, C.T., Wong, W.S., Swamy, S., Becq, J., Murray, L.J., and Cheetham, R.K. 2012. Strelka: accurate somatic small-variant calling from sequenced tumor-normal sample pairs. Bioinformatics 28:1811-1817.
    • (2012) Bioinformatics , vol.28 , pp. 1811-1817
    • Saunders, C.T.1    Wong, W.S.2    Swamy, S.3    Becq, J.4    Murray, L.J.5    Cheetham, R.K.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.