Crystallization of the N-terminal regulatory domain of the enhancer-binding protein FleQ from Stenotrophomonas maltophilia

Acta Crystallographica Section F:Structural Biology Communications

Volumn 70, Issue 3, 2014, Pages 326-330

  Yang, Jauo Guey ^a   Shih, Min Shao ^a   Kuo, Wei Ting ^a   Chin, Ko Hsin ^a   Shen, Gwan Han ^b   Chou, Shan Ho ^a  

^a NATIONAL CHUNG HSING UNIVERSITY   (Taiwan)

^b TAICHUNG VETERANS GENERAL HOSPITAL   (Taiwan)

Author keywords

AAA domain; bEBP; c di GMP; FleQ; Stenotrophomonas maltophilia

Indexed keywords

BACTERIAL PROTEIN; REPRESSOR PROTEIN;

AAA DOMAIN; AMINO ACID SEQUENCE; ARTICLE; BEBP; C-DI-GMP; CHEMISTRY; CRYSTALLIZATION; FLEQ; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PROTEIN TERTIARY STRUCTURE; STENOTROPHOMONAS MALTOPHILIA; X RAY CRYSTALLOGRAPHY;

AAA DOMAIN; BEBP; C-DI-GMP; FLEQ; STENOTROPHOMONAS MALTOPHILIA;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; CLONING, MOLECULAR; CONSERVED SEQUENCE; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; MOLECULAR SEQUENCE DATA; PROTEIN STRUCTURE, TERTIARY; REPRESSOR PROTEINS; STENOTROPHOMONAS MALTOPHILIA;

EID: 84905511582     PISSN: None     EISSN: 2053230X     Source Type: Journal    
DOI: 10.1107/S2053230X14001514     Document Type: Article

References (27)

1. Amikam, D. & Galperin, M. Y. (2006). Bioinformatics, 22, 3-6.
2. Arora, S. K., Ritchings, B. W., Almira, E. C., Lory, S. & Ramphal, R. (1997). J. Bacteriol. 179, 5574-5581.
3. Baraquet, C. & Harwood, C. S. (2013). Proc. Natl Acad. Sci. USA, 110, 18478-18483.
4. Baraquet, C., Murakami, K., Parsek, M. R. & Harwood, C. S. (2012). Nucleic Acids Res. 40, 7207-7218.
5. Barrett, J., Ray, P., Sobczyk, A., Little, R. & Dixon, R. (2011). Mol. Microbiol. 39, 480-493.
6. Benach, J., Swaminathan, S. S., Tamayo, R., Handelman, S. K., Folta-Stogniew, E., Ramos, J. E., Forouhar, F., Neely, H., Seetharaman, J., Camilli, A. & Hunt, J. F. (2007). EMBO J. 26, 5153-5166.
7. Chin, K.-H., Kuo, W.-T., Yu, Y.-J., Liao, Y.-T., Yang, M.-T. & Chou, S.-H. (2012). Acta Cryst. D68, 1380-1392.
8. Chin, K.-H., Lee, Y.-C., Tu, Z.-L., Chen, C.-H., Tseng, Y.-H., Yang, J.-M., Ryan, R. P., McCarthy, Y., Dow, J. M., Wang, A. H.-J. & Chou, S.-H. (2010). J. Mol. Biol. 396, 646-662.
9. Crossman, L. C. et al. (2008). Genome Biol. 9, R74.
10. Gomelsky, M. (2011). Mol. Microbiol. 79, 562-565.
11. Hengge, R. (2009). Nature Rev. Microbiol. 7, 263-273.
12. Hickman, J. W. & Harwood, C. S. (2008). Mol. Microbiol. 69, 376-389.
13. Hu, R.-M., Yang, T.-C., Yang, S.-H. & Tseng, Y.-H. (2005). Biochem. Biophys. Res. Commun. 335, 1035-1043.
14. Kalia, D., Merey, G., Nakayama, S., Zheng, Y., Zhou, J., Luo, Y., Guo, M., Roembke, B. T. & Sintim, H. O. (2013). Chem. Soc. Rev. 42, 305-341.
15. Krasteva, P. V., Giglio, K. M. & Sondermann, H. (2012). Protein Sci. 21, 929-948.
16. Kulshina, N., Baird, N. J. & Ferré-D'Amaré, A. R. (2009). Nature Struct. Mol. Biol. 16, 1212-1217.
17. Navarro, M. V. A. S., De, N., Bae, N., Wang, Q. & Sondermann, H. (2009). Structure, 17, 1104-1116.
18. Pages, D., Rose, J., Conrod, S., Cuine, S., Carrier, P., Heulin, T. & Achouak, W. (2008). PLoS One, 3, e1539.
19. Römling, U. (2011). Environ. Microbiol. 14, 1817-1829.
20. Römling, U., Gomelsky, M. & Galperin, M. Y. (2005). Mol. Microbiol. 57, 629-639.
21. Ryan, R. P., Monchy, S., Cardinale, M., Taghavi, S., Crossman, L., Avison, M. B., Berg, G., van der Lelie, D. & Dow, J. M. (2009). Nature Rev. Microbiol. 7, 514-525.
22. Ryan, R. P., Tolker-Nielsen, T. & Dow, J. M. (2012). Trends Microbiol. 20, 235-242.
23. Schirmer, T. & Jenal, U. (2009). Nature Rev. Microbiol. 7, 724-735.
24. Smith, K. D., Lipchock, S. V., Ames, T. D., Wang, J., Breaker, R. R. & Strobell, S. A. (2009). Nature Struct. Mol. Biol. 16, 1218-1223.
25. Sondermann, H., Shikuma, N. J. & Yildiz, F. H. (2011). Curr. Opin. Microbiol. 15, 140-146.
26. West, A. H. & Stock, A. M. (2001). Trends Biochem. Sci. 26, 369-376.
27. Wu, Y.-Y., Chin, K.-H., Chou, C.-C., Lee, C.-C., Shr, H.-L., Gao, F. P., Lyu, P.- C., Wang, A. H.-J. & Chou, S.-H. (2005). Acta Cryst. F61, 902-905.