Bioremediation potential of native hydrocarbon degrading bacterial strains in crude oil contaminated soil under microcosm study

International Biodeterioration and Biodegradation

Volumn 94, Issue , 2014, Pages 79-89

  Roy, Abhijit Sarma ^a   Baruah, Reshita ^a   Borah, Maina ^a   Singh, Anil Kumar ^a   Deka Boruah, Hari Prasanna ^a   Saikia, Neelima ^a   Deka, Manab ^c   Dutta, Nipu ^b   Chandra Bora, Tarun ^a  

^a CSIR NORTH EAST INSTITUTE OF SCIENCE AND TECHNOLOGY   (India)

^b TEZPUR UNIVERSITY   (India)

^c GAUHATI UNIVERSITY   (India)

Author keywords

Bioremediation; Crude oil; Environment; Pollutant; Soil

Indexed keywords

BACTERIA; BACTERIOLOGY; BATCH CELL CULTURE; BIOASSAY; BIOREMEDIATION; BIOTECHNOLOGY; SOIL POLLUTION; SOILS; CRUDE OIL;

BIOREMEDIATION POTENTIALS; CRUDE OIL-CONTAMINATED SOILS; ENVIRONMENT; GAS CHROMATOGRAPHY ANALYSIS; NUTRIENT SUPPLEMENTS; OIL-DEGRADING BACTERIA; PETROLEUM CONTAMINANTS; POLLUTANT; BACTERIAL STRAINS; MICROCOSM STUDIES;

CRUDE OIL; BIOREMEDIATION;

BIOASSAY; BIOREMEDIATION; CRUDE OIL; DNA; HYDROCARBON; MICROBIAL ACTIVITY; MORTALITY; SOIL POLLUTION; SOIL QUALITY; BACTERIUM; MICROCOSM; PETROLEUM; POLLUTANT;

BACTERIA (MICROORGANISMS);

EID: 84904871716     PISSN: 09648305     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ibiod.2014.03.024     Document Type: Article

References (51)

1. Atlas R.M. Microbial degradation of petroleum hydrocarbons: an environmental perspective. Microbiol. Rev. 1981, 45:180-209.
2. Banat I.M. Biosurfactants production and possible uses in microbial enhanced oil recovery and oil pollution remediation: a review. Bioresour. Technol. 1995, 51:1-12.
3. Bremner J.M., Tabatabai M.A. Use of p-nitrophenyl phosphate for the assay of soil phosphatase activity. Soil. Biol. Biochem. 1969, 1:301-307.
4. Bundy J.G., Paton G.I., Campbell C.D. Combined microbial community level and single species biosensor responses to monitor recovery of oil polluted soil. Soil. Biol. Biochem. 2004, 36:1149-1159.
5. Camina F., Trasar-Cepeda C., Gil-Sotres F., Leiros M.C. Measuring of dehydrogenase activity in acid soils rich in organic matter. Soil. Biol. Biochem. 1998, 30:1005-1011.
6. Da Cruz G.F., de Vasconcelos S.P., Angolini C.F.F., Dellagnezze B.M., Garcia I.N.S., de Oliveira V.M., Santos Neto E.V., Marsaioli A.J. Could petroleum biodegradation be a joint achievement of aerobic and anaerobic microrganisms in deep sea reservoirs?. AMB Express 2011, 1:47.
7. Das K., Mukherjee A.K. Crude petroleum-oil biodegradation efficiency of Bacillus subtilis and Pseudomonas aeruginosa strains isolated from petroleum oil contaminated soil from Northeast India. Bioresour. Technol. 2007, 98:1339-1345.
8. Desai J.D., Banat M. Microbial production of surfactants and their commercial potential. Microbiol Mol Biol Rev. Mar. 1997, 6:47-64.
9. De Jong E. Effect of a crude oil spill on cereals. Environ. Pollut. 1980, 22:187-307.
10. Dorn P.B., Salanitro J.P. Temporal ecological assessment of oil contaminated soils before and after bioremediation. Chemosphere 2000, 40:419-426.
11. Erickson M., Dalhammar G., Borg-Karson A.K. Aerobic degradation of hydrocarbon mixture in natural contaminated potting soil in indigenous microorganisms at 20°C and 6°C. Appl. Microbiol. Biotechnol. 1995, 51:532-535.
12. Fernández M.D., Pro J., Alonso C., Aragonese P., Tarazona J.V. Terrestrial microcosms in a feasibility study on the remediation of diesel-contaminated soils. Ecotoxicol. Environ. Saf. 2011, 74:2133-2140.
13. Frick C.M., Farrell R.E., Germida J.J. Assesment of Phytoremediation as an In-situ Technique for Cleaning Oil Contaminated Sites 1999, PTAC Petroleum Technology Alliance, Canada,Calgary.
14. Ganesh A., Lin J. Diesel degradation and biosurfactant production by Gram-positive isolates. Afr. J. Biotechnol. 2009, 8:5847-5854.
15. Geissen V., Gomez-Rivera P., Lwanga E., Mendoza R.B., Narcias A.T., Marcias E.B. Using earthworms to test the efficiency of remediation of oil-polluted soil in tropical Mexico. Ecotoxicol. Environ. Saf. 2008, 71:638-642.
16. Gerhardt K., Huang X.D., Glick B.R., Greenberg B.M. Phytoremediation and rhizoremediation of organic soil contaminants: potential and challenges. Plant Sci. 2009, 176:20-30.
17. Glick B.R. Phytoremediation: synergistic use of plants and bacteria to clean up the environment. Biotechnol. Adv. 2003, 21:383-393.
18. Glick B.R. Using soil bacteria to facilitate phytoremediation. Biotechnol. Adv. 2010, 28:367-374.
19. Gogoi B., Dutta N., Goswami P., Mohan T. Acase study of bioremediation of petroleum-hydrocarbon contaminated soil at a crude oil spill site. Adv. Environ. Res. 2003, 7:767-782.
20. Gogoi J., Pathak N., Duarah I., Deka Boruah H.P., Saikia N., Handique A.K. Microbial activity in high-sulfur reclaimed coal mine overburden sites. Soil. Sediment. Contam. 2012, 21:42-50.
21. Hanna S.H.S., Weaver R.W. Earthworm survival in oil contaminated soil. Plant Soil. 2002, 240:127-132.
22. Head I., Jones D., Roling W. Marine microorganisms make a meal of oil. Nat. Rev. Microbiol. 2006, 4:173-182.
23. Holliger C., Gaspard S., Glod G., Heijman C., Schumacher W., Schwarzenbach R.P., Vazquez F. Contaminated environments in the subsurface and bioremediation: organic contaminants. FEMS Microbiol. Rev. 1997, 20:517-523.
24. Jackson M.L. Soil Chemical Analysis 1973, Prentice Hall of India Ltd, New Delhi, pp-23.
25. Johnsen A.R., Schmidt S., Hybholy T.K., Hendriksen S., Jacobsen C.S., Andersen O. Strong impact on the polycyclic aromatic hydrocarbon (PAH)-degrading community of a PAH-polluted soil but marginal effect on PAH degradation when priming with bioremediated soil dominated by mycobacteria. Appl. Environ. Microbiol. 2007, 73:1474-1480.
26. Kastner M., Jammali B.M., Mahro B. Impact of inoculation protocols, salinity, and pH on the degradation of polycylic aromatic hydrocarbons (PAHs) and suvival of PAHs degrading bacteria introduced into the soil. Appl. Environ. Microbiol. 1998, 64:359-362.
27. Killops S.D., AI-Juboori M.A.H.A. Characterisation of the unresolved complex mixture (UCM) in the gas chromatograms of biodegraded petroleums. Org. Geochem 1990, 15:147-160.
28. Lal B., Khanna S. Degradation of crude oil by Acinetobacter calcoaceticus and Alcaligen sodorans. J.Appl. Bacteriol. 1996, 81:355-362.
29. Lundstedt S., Haglund P., Oberg L. Degradation and formation of polycyclic aromatic compounds during bioslurry treatment of an aged gasworks soil. Environ. Toxicol. Chem. 2003, 22:1413-1420.
30. Manif S., Chankha M., Labat M., Sayadi S. Simultaneous hydrocarbon biodegradation and biosurfactant production by oil field selected bacteria. J.Appl. Microbiol. 2011, 111:523-536.
31. Mills A.L., Breul C., Colwell R.R Enumeration of petroleum degrading Marine and Estuarine microorganism by the most probably number method. Can. J. Microb. 1978, 24:522-557.
32. Margesin R., Labbe D., Schinner F., Greer C., Whyte L. Characterization of hydrocarbon-degrading microbial populations in contaminated and pristine alpine soils. Appl. Environ. Microbiol. 2003, 69:3085-3092.
33. Omotayo A.E., Efetie O.A., Oyetibo G., Ilori M.O., Amund O.O. Degradation of aviation fuel by microorganisms isolated from tropical polluted soils. Int. J. Biol. Chem. Sci. 2011, 5:698-708.
34. Oudot J., Merlin F.X., Pinvidic P. Weathering rates of oil components in a biodegradation experiment in estuarine sediments. Mar. Environ. Res. 1998, 45,113-125.
35. Ramos J.L., Duque E., Ramos-Gonzalez M.I. Survival in soils of an herbicide-resistant Pseudomonas putida strain bearing a recombinant TOL plasmid. Appl. Environ. Microbiol. 1991, 57:260-266.
36. Riser-Roberts E. Bioremediation of Petroleum Contaminated Sites 1992, CRC Press Inc, Boca Raton (FL).
37. Sarma Roy A., Yenn R., Singh A.K., Deka Boruah H.P., Saikia N., Deka M. Bioremediation of crude oil contaminated tea plantation soil using two Pseudomonas aeruginosa strains AS 03 and NA 108. Afr. J. Biotech. 2013, 12(19):2600-2610.
38. Saterbak A., Toy R.J., McMain B.J., Williams M.P., Dorn P.B. Ecotoxicological and analytical assessment of effects of bioremediation on hydrocarbon-containing soils. Environ. Toxicol. Chem. 2000, 19:2643-2652.
39. Schaefer M. Behavioural endpoints in earthworm ecotoxicology: evaluation of different test systems in soil toxicity assessment. J.Soil. Sediment. 2003, 3:79-84.
40. Shin K.H., Jung H.Y., Chang P.C., Choi H.C., Kim K.W. Earthworm toxicity during chemical oxidation of diesel-contaminated sand. Environ. Toxicol. Chem. 2005, 24:1924-1929.
41. Shulga A., Karpenko E., Vildanova-Martsishin R., Turovsky A., Soltys M. Biosurfactant enhanced remediation of oil-contaminated environments. Adsorpt. Sci. Technol. 1999, 18:171-176.
42. Sims J.L., Sumtilita J.M., Russell H.H. In-situ Bioremediation of Contaminated Ground Water 1992, EPA/540/S-92/003.
43. Smith C.J., Chalk P.M. Fixation and loss of nitrogen during transformation of nitrite in soils. J.Soil. Sci. Soc. Am. 1980, 44:288-291.
44. Udo E.J., Fayemi A.A.A. The effect of oil pollution on soil germination, growth and nutrient uptake of corn. J.Environ. Qual. 1995, 4:537-540.
45. Ulrici W. Contaminant soil areas, different countries and contaminant monitoring of contaminants. Soil Decontamination Biotechnology 2008, vol. 11:5-42. WILEY-VCH Verlag GmbH. H.J. Rehm, G. Reed (Eds.).
46. Wang X., Bartha R. Effect of bioremediation on residues, activity, and toxicity in soil contaminated by fuel spills. Soil. Biol. Biochem. 1990, 22:501-505.
47. Wang H., Xu R., Li F., Qiao J., Zhang B. Efficient degradation of lube oil by a mixed bacterial consortium. J.Environ. Sci. 2010, 22:381-388.
48. Watanabe K. Microorganisms relevant to bioremediation. Curr. Opin. Biotechnol. 2001, 12:237-241.
49. Weisburg W.G., Barns S.M., Pelletier D.A., Lane D.J. 16S ribosomal DNA amplification for phylogenetic study. J.Bacteriol. 1991, 173:697-703.
50. Yenn R., Borah M., Deka Boruah H.P., Sarma Roy A., Baruah R., Saikia N., Sahu O.P., Tamuli A.K. Phytoremediation of abandoned crude oil contaminated drill sites of Assam with the aid of a hydrocarbon-degrading bacterial formulation. Int. J. Phytoremediation 2014, 16:909-925.
51. Zhuang X., Chen J., Shim H., Bai Z. New advances in plant growth promoting rhizobacteria for bioremediation. Environ. Int. 2007, 33:406-413.