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Volumn 83, Issue , 2014, Pages 20-25

Selection and validation of reference genes for transcript normalization in gene expression studies in Catharanthus roseus

Author keywords

BestKeeper; Catharanthus roseus; GeNorm; NormFinder; QPCR; Reference gene; Transcript normalization

Indexed keywords

MESSENGER RNA;

EID: 84904753311     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plaphy.2014.07.004     Document Type: Article
Times cited : (31)

References (16)
  • 1
    • 3442876969 scopus 로고    scopus 로고
    • Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
    • Andersen C.L., Jensen J.L., Ørntoft T.F. Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res. 2004, 64:5245-5250. 10.1158/0008-5472.CAN-04-0496.
    • (2004) Cancer Res. , vol.64 , pp. 5245-5250
    • Andersen, C.L.1    Jensen, J.L.2    Orntoft, T.F.3
  • 3
    • 32644481938 scopus 로고    scopus 로고
    • Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis
    • Czechowski T., Stitt M., Altmann T., Udvardi M.K., Scheible W.-R. Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiol. 2005, 139:5-17. 10.1104/pp.105.063743.
    • (2005) Plant Physiol. , vol.139 , pp. 5-17
    • Czechowski, T.1    Stitt, M.2    Altmann, T.3    Udvardi, M.K.4    Scheible, W.-R.5
  • 4
    • 34249875679 scopus 로고    scopus 로고
    • Catharanthus terpenoid indole alkaloids: biosynthesis and regulation
    • El-Sayed M., Verpoorte R. Catharanthus terpenoid indole alkaloids: biosynthesis and regulation. Phytochem. Rev. 2007, 6:277-305. 10.1007/s11101-006-9047-8.
    • (2007) Phytochem. Rev. , vol.6 , pp. 277-305
    • El-Sayed, M.1    Verpoorte, R.2
  • 6
    • 84855714964 scopus 로고    scopus 로고
    • Differential patterns of dehydroabietic acid biotransformation by Nicotiana tabacum and Catharanthus roseus cells
    • Häkkinen S.T., Lackman P., Nygrén H., Oksman-Caldentey K.-M., Maaheimo H., Rischer H. Differential patterns of dehydroabietic acid biotransformation by Nicotiana tabacum and Catharanthus roseus cells. J.Biotechnol. 2012, 157:287-294. 10.1016/j.jbiotec.2011.11.008.
    • (2012) J.Biotechnol. , vol.157 , pp. 287-294
    • Häkkinen, S.T.1    Lackman, P.2    Nygrén, H.3    Oksman-Caldentey, K.-M.4    Maaheimo, H.5    Rischer, H.6
  • 7
    • 84865694600 scopus 로고    scopus 로고
    • Development of improved horticultural genotypes characterized by novel over-flowering inflorescence trait in periwinkle Catharanthus roseus
    • Kumar S., Chaudhari S., Kumari R., Sharma V., Kumar A. Development of improved horticultural genotypes characterized by novel over-flowering inflorescence trait in periwinkle Catharanthus roseus. Proc. Natl. Acad. Sci. India Sect. B Biol. Sci. 2012, 82:399-404. 10.1007/s40011-012-0048-7.
    • (2012) Proc. Natl. Acad. Sci. India Sect. B Biol. Sci. , vol.82 , pp. 399-404
    • Kumar, S.1    Chaudhari, S.2    Kumari, R.3    Sharma, V.4    Kumar, A.5
  • 8
    • 0032811420 scopus 로고    scopus 로고
    • Involvement of the octadecanoid pathway and protein phosphorylation in fungal elicitor-induced expression of terpenoid indole alkaloid biosynthetic genes in Catharanthus roseus
    • Menke F.L.H., Parchmann S., Mueller M.J., Kijne J.W., Memelink J. Involvement of the octadecanoid pathway and protein phosphorylation in fungal elicitor-induced expression of terpenoid indole alkaloid biosynthetic genes in Catharanthus roseus. Plant Physiol. 1999, 119:1289-1296. 10.1104/pp.119.4.1289.
    • (1999) Plant Physiol. , vol.119 , pp. 1289-1296
    • Menke, F.L.H.1    Parchmann, S.2    Mueller, M.J.3    Kijne, J.W.4    Memelink, J.5
  • 10
    • 1842483281 scopus 로고    scopus 로고
    • Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations
    • Pfaffl M.W., Tichopad A., Prgomet C., Neuvians T.P. Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations. Biotechnol. Lett. 2004, 26:509-515. 10.1023/B: BILE.0000019559.84305.47.
    • (2004) Biotechnol. Lett. , vol.26 , pp. 509-515
    • Pfaffl, M.W.1    Tichopad, A.2    Prgomet, C.3    Neuvians, T.P.4
  • 13
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • research0034-research0034.0011
    • Vandesompele J., De Preter K., Pattyn F., Poppe B., Van Roy N., De Paepe A., Speleman F. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 2002, 3. research0034-research0034.0011. 10.1186/gb-2002-3-7-research0034.
    • (2002) Genome Biol. , vol.3
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6    Speleman, F.7
  • 14
    • 84858338693 scopus 로고    scopus 로고
    • Emerging trends in research on spatial and temporal organization of terpenoid indole alkaloid pathway in Catharanthus roseus: a literature update
    • Verma P., Mathur A.K., Srivastava A., Mathur A. Emerging trends in research on spatial and temporal organization of terpenoid indole alkaloid pathway in Catharanthus roseus: a literature update. Protoplasma 2012, 249:255-268. 10.1007/s00709-011-0291-4.
    • (2012) Protoplasma , vol.249 , pp. 255-268
    • Verma, P.1    Mathur, A.K.2    Srivastava, A.3    Mathur, A.4
  • 15
    • 77049088223 scopus 로고    scopus 로고
    • Selection of appropriate reference genes for gene expression studies by quantitative real-time polymerase chain reaction in cucumber
    • Wan H., Zhao Z., Qian C., Sui Y., Malik A.A., Chen J. Selection of appropriate reference genes for gene expression studies by quantitative real-time polymerase chain reaction in cucumber. Anal. Biochem 2010, 399:257-261. 10.1016/j.ab.2009.12.008.
    • (2010) Anal. Biochem , vol.399 , pp. 257-261
    • Wan, H.1    Zhao, Z.2    Qian, C.3    Sui, Y.4    Malik, A.A.5    Chen, J.6
  • 16
    • 78149416568 scopus 로고    scopus 로고
    • Reference gene selection for quantitative real-time polymerase chain reaction in Populus
    • Xu M., Zhang B., Su X., Zhang S., Huang M. Reference gene selection for quantitative real-time polymerase chain reaction in Populus. Anal. Biochem 2011, 408:337-339. 10.1016/j.ab.2010.08.044.
    • (2011) Anal. Biochem , vol.408 , pp. 337-339
    • Xu, M.1    Zhang, B.2    Su, X.3    Zhang, S.4    Huang, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.