Whole genome single-nucleotide variation profile-based phylogenetic tree building methods for analysis of viral, bacterial and human genomes

Genomics

Volumn 104, Issue 1, 2014, Pages 1-7

  Faison, William J ^a   Rostovtsev, Alexandre ^b   Castro Nallar, Eduardo ^c   Crandall, Keith A ^c   Chumakov, Konstantin ^b   Simonyan, Vahan ^b   Mazumder, Raja ^a,d  

^a GEORGE WASHINGTON UNIVERSITY MEDICAL CENTER   (United States)

^b CENTER FOR BIOLOGICS EVALUATION AND RESEARCH   (United States)

^c GEORGE WASHINGTON UNIVERSITY   (United States)

^d GEORGE WASHINGTON UNIVERSITY SCHOOL OF MEDICINE AND HEALTH SCIENCES   (United States)

Author keywords

Cancer genomics; Next generation sequencing; Phylogenetic; SNP; SNV; Vaccine quality control

Indexed keywords

ALGORITHM; ARTICLE; BACTERIAL GENOME; BURKHOLDERIA; CLUSTER ANALYSIS; COMPUTER PROGRAM; HUMAN GENOME; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; POLIOMYELITIS VIRUS; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM; VIRUS GENOME; BURKHOLDERIA PSEUDOMALLEI; GENETICS; GENOMICS; HUMAN; PHYLOGENY; PROCEDURES; SEQUENCE ALIGNMENT;

BACTERIA (MICROORGANISMS); BURKHOLDERIA; POLIOVIRUS;

ALGORITHMS; BURKHOLDERIA PSEUDOMALLEI; GENOME, HUMAN; GENOMICS; HUMANS; PHYLOGENY; POLIOVIRUS; POLYMORPHISM, SINGLE NUCLEOTIDE; SEQUENCE ALIGNMENT; SOFTWARE;

EID: 84904430769     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2014.06.001     Document Type: Article

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