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Volumn 56, Issue 7, 2014, Pages 599-608

Guidelines for the tetra-primer ARMS-PCR technique development

Author keywords

Genotyping; Optimization; Polymorphism; SNP; Tetra primer ARMS PCR

Indexed keywords

ELECTROPHORESIS; OPTIMIZATION; POLYMORPHISM;

EID: 84904276929     PISSN: 10736085     EISSN: 15590305     Source Type: Journal    
DOI: 10.1007/s12033-014-9734-4     Document Type: Article
Times cited : (170)

References (31)
  • 1
    • 0037432755 scopus 로고    scopus 로고
    • The Human Genome Project: Lessons from large-scale biology
    • DOI 10.1126/science.1084564
    • Collins, F. S., Morgan, M., & Patrinos, A. (2003). The Human Genome Project: lessons from large-scale biology. Science, 300(5617), 286-290. (Pubitemid 36433711)
    • (2003) Science , vol.300 , Issue.5617 , pp. 286-290
    • Collins, F.S.1    Morgan, M.2    Patrinos, A.3
  • 2
    • 79959524146 scopus 로고    scopus 로고
    • A haplotype map of the human genome
    • The International HapMap Consortium
    • The International HapMap Consortium. (2005). A haplotype map of the human genome. Nature, 437(7063), 1299-1320.
    • (2005) Nature , vol.437 , Issue.7063 , pp. 1299-1320
  • 4
    • 0036955891 scopus 로고    scopus 로고
    • SNP alleles in human disease and evolution
    • Shastry, B. S. (2002). SNP alleles in human disease and evolution. Journal of Human Genetics, 47(11), 561-566.
    • (2002) Journal of Human Genetics , vol.47 , Issue.11 , pp. 561-566
    • Shastry, B.S.1
  • 5
    • 33645736866 scopus 로고    scopus 로고
    • Seventh international meeting on single nucleotide polymorphism and complex genome analysis: Ever bigger scans and an increasingly variable genome
    • Rocha, D., Gut, I., Jeffereys, A. J., Kwok, P. Y., Brookes, A. J., & Chanock, S. J. (2006). Seventh international meeting on single nucleotide polymorphism and complex genome analysis: ever bigger scans and an increasingly variable genome. Human Genetics, 119(4), 451-456.
    • (2006) Human Genetics , vol.119 , Issue.4 , pp. 451-456
    • Rocha, D.1    Gut, I.2    Jeffereys, A.J.3    Kwok, P.Y.4    Brookes, A.J.5    Chanock, S.J.6
  • 6
    • 43049146524 scopus 로고    scopus 로고
    • A HapMap harvest of insights into the genetics of common disease
    • DOI 10.1172/JCI34772
    • Manolio, T. A., Brooks, L. D., & Collins, F. S. A. (2008). HapMap harvest of insights into the genetics of common disease. Journal of Clinical Investigation, 118(5), 1590-1605. (Pubitemid 351632361)
    • (2008) Journal of Clinical Investigation , vol.118 , Issue.5 , pp. 1590-1605
    • Manolio, T.A.1    Brooks, L.D.2    Collins, F.S.3
  • 7
    • 61849136801 scopus 로고    scopus 로고
    • Simple allele-discriminating PCR for cost-effective and rapid genotyping and mapping
    • doi:10.1186/1746-4811-5-1
    • Bui, M., & Liu, Z. (2009). Simple allele-discriminating PCR for cost-effective and rapid genotyping and mapping. Plant Methods, 5, 1. doi:10.1186/1746-4811-5-1.
    • (2009) Plant Methods , vol.5 , pp. 1
    • Bui, M.1    Liu, Z.2
  • 9
    • 33846868078 scopus 로고    scopus 로고
    • Approaches for SNP genotyping
    • Wang, W. P., Ni, K. Y., & Zhou, G. H. (2006). Approaches for SNP genotyping. Yi Chuan, 28(1), 117-126.
    • (2006) Yi Chuan , vol.28 , Issue.1 , pp. 117-126
    • Wang, W.P.1    Ni, K.Y.2    Zhou, G.H.3
  • 11
    • 0033967208 scopus 로고    scopus 로고
    • Single-nucleotide polymorphism analysis by MALDI-TOF mass spectrometry
    • DOI 10.1016/S0167-7799(99)01401-8, PII S0167779999014018
    • Griffin, T. J., & Smith, L. M. (2000). Single-nucleotide polymorphism analysis by MALDI-TOF mass spectrometry. Trends in Biotechnology, 18(2), 77-84. (Pubitemid 30084699)
    • (2000) Trends in Biotechnology , vol.18 , Issue.2 , pp. 77-84
    • Griffin, T.J.1    Smith, L.M.2
  • 12
    • 28644434277 scopus 로고    scopus 로고
    • Pyrosequencing: History, biochemistry and future
    • DOI 10.1016/j.cccn.2005.04.038, PII S0009898105004274
    • Ahmadian, A., Ehn, M., & Hober, S. (2006). Pyrosequencing: History, biochemistry and future. Clinica Chimica Acta, 363(1-2), 83-94. (Pubitemid 41748205)
    • (2006) Clinica Chimica Acta , vol.363 , Issue.1-2 , pp. 83-94
    • Ahmadian, A.1    Ehn, M.2    Hober, S.3
  • 13
    • 20044369371 scopus 로고    scopus 로고
    • Toward genome wide SNP genotyping
    • Syvänen, A. C. (2005). Toward genome wide SNP genotyping. Nature Genetics, 37(Suppl), S5-S10.
    • (2005) Nature Genetics , vol.37 , Issue.SUPPL.
    • Syvänen, A.C.1
  • 15
    • 0036107148 scopus 로고    scopus 로고
    • Competitive amplification and unspecific amplification in polymerase chain reaction with confronting two-pair primers
    • Hamajima, N., Saito, T., Matsuo, K., & Tajima, K. (2002). Competitive amplification and unspecific amplification in polymerase chain reaction with confronting two-pair primers. Journal of Molecular Diagnostics, 4(2), 103-107. (Pubitemid 34555504)
    • (2002) Journal of Molecular Diagnostics , vol.4 , Issue.2 , pp. 103-107
    • Hamajima, N.1    Saito, T.2    Matsuo, K.3    Tajima, K.4
  • 16
    • 0037976417 scopus 로고    scopus 로고
    • An efficient procedure for genotyping single nucleotide polymorphisms
    • doi:10.1093/nar/29.17.e88
    • Ye, S., Dhillon, S., Ke, X., Collins, A. R., & Day, I. N. (2001). An efficient procedure for genotyping single nucleotide polymorphisms. Nucleic Acids Research, 29, e88. doi:10.1093/nar/29.17.e88.
    • (2001) Nucleic Acids Research , vol.29
    • Ye, S.1    Dhillon, S.2    Ke, X.3    Collins, A.R.4    Day, I.N.5
  • 17
    • 0035776497 scopus 로고    scopus 로고
    • Methods for genotype single nucleotide polymorphism
    • Kwok, P. Y. (2001). Methods for genotype single nucleotide polymorphism. Annual Review of Genomics and Human Genetics, 2, 235-258.
    • (2001) Annual Review of Genomics and Human Genetics , vol.2 , pp. 235-258
    • Kwok, P.Y.1
  • 19
    • 44049092836 scopus 로고    scopus 로고
    • Amplification-refractory mutation system (ARMS) analysis of point mutations
    • , vol 9.8 Wiley Online Library
    • Little, S. (2001). Amplification-refractory mutation system (ARMS) analysis of point mutations. Current protocols Human Genet, vol 9.8 (Wiley Online Library): (pp. 1-12).
    • (2001) Current Protocols Human Genet , pp. 1-12
    • Little, S.1
  • 21
    • 51549089878 scopus 로고    scopus 로고
    • Functional markers for selection of potyvirus resistance alleles at the pvr2-eIF4E locus in pepper using tetra-primer ARMS-PCR
    • Rubio, M., Caranta, C., & Palloix, A. (2008). Functional markers for selection of potyvirus resistance alleles at the pvr2-eIF4E locus in pepper using tetra-primer ARMS-PCR. Genome, 51(9), 767-771.
    • (2008) Genome , vol.51 , Issue.9 , pp. 767-771
    • Rubio, M.1    Caranta, C.2    Palloix, A.3
  • 22
    • 2542489676 scopus 로고    scopus 로고
    • Genotyping single nucleotide polymorphisms in barley by tetra-primer ARMS-PCR
    • Chiapparino, E., Lee, D., & Donini, P. (2004). Genotyping single nucleotide polymorphisms in barley tetra-primer ARMS-PCR. Genome, 47(2), 414-420. (Pubitemid 38673772)
    • (2004) Genome , vol.47 , Issue.2 , pp. 414-420
    • Chiapparino, E.1    Lee, D.2    Donini, P.3
  • 23
    • 23944509929 scopus 로고    scopus 로고
    • Improved PCR method for amplification of GC-rich DNA sequences
    • Hubé, F., Reverdiau, P., Iochmann, S., & Gruel, Y. (2005). Improved PCR method for amplification of GC-rich DNA sequences. Molecular Biotechnology, 31(1), 81-84. (Pubitemid 41208423)
    • (2005) Molecular Biotechnology , vol.31 , Issue.1 , pp. 81-84
    • Hube, F.1    Reverdiau, P.2    Iochmann, S.3    Gruel, Y.4
  • 24
    • 0032528128 scopus 로고    scopus 로고
    • Localised sequence regions possessing high melting temperatures prevent the amplification of a DNA mimic in competitive PCR
    • DOI 10.1093/nar/26.14.3340
    • McDowell, D. C., Burns, N. A., & Parkes, H. C. (1998). Localised sequence regions possessing high melting temperatures prevent the amplification of a DNA mimic in competitive PCR. Nucleic Acids Resarch, 26(14), 3340-3347. (Pubitemid 28321396)
    • (1998) Nucleic Acids Research , vol.26 , Issue.14 , pp. 3340-3347
    • McDowell, D.G.1    Burns, N.A.2    Parkes, H.C.3
  • 25
    • 0030883816 scopus 로고    scopus 로고
    • Betaine improves the PCR amplification of GC-rich DNA sequences
    • DOI 10.1093/nar/25.19.3957
    • Henke, W., Herdel, K., Jung, K., Schnorr, D., & Loening, S. A. (1997). Betaine improves the PCR amplification of GC-rich DNA sequences. Nucleic Acids Research, 25(19), 3957-3958. (Pubitemid 27420509)
    • (1997) Nucleic Acids Research , vol.25 , Issue.19 , pp. 3957-3958
    • Henke, W.1    Herdel, K.2    Jung, K.3    Schnorr, D.4    Loening, S.A.5
  • 26
    • 0028196747 scopus 로고
    • Denaturants or cosolvents improve the specificity of PCR amplification of a G + C-rich DNA using genetically engineered DNA polymerases
    • DOI 10.1016/0378-1119(94)90723-4
    • Varadaraj, K., & Skinner, D. M. (1994). Denaturants or cosolvents improve the specificity of PCR amplification of a G + C-rich DNA using genetically engineered DNA polymerases. Gene, 140(1), 1-5. (Pubitemid 24082369)
    • (1994) Gene , vol.140 , Issue.1 , pp. 1-5
    • Varadaraj, K.1    Skinner, D.M.2
  • 27
    • 35248816369 scopus 로고    scopus 로고
    • Identification, validation and survey of a single nucleotide polymorphism (SNP) associated with pungency in Capsicum spp
    • Garcés-Claver, A., Fellman, S. M., Gil-Ortega, R., Jahn, M., & Arnedo-Andrés, M. S. (2007). Identification, validation and survey of a single nucleotide polymorphism (SNP) associated with pungency in Capsicum spp. TAG Theoretical and Applied Genetics, 115(7), 907-916.
    • (2007) TAG Theoretical and Applied Genetics , vol.115 , Issue.7 , pp. 907-916
    • Garcés-Claver, A.1    Fellman, S.M.2    Gil-Ortega, R.3    Jahn, M.4    Arnedo-Andrés, M.S.5
  • 29
    • 0035317243 scopus 로고    scopus 로고
    • Allele-specific binding of the ubiquitous transcription factor OCT-1 to the functional single nucleotide polymorphism (SNP) sites in the tumor necrosis factor-alpha gene (TNFA) promoter
    • Hohjoh, H., & Tokunaga, K. (2001). Allele-specific binding of the ubiquitous transcription factor OCT-1 to the functional single nucleotide polymorphism (SNP) sites in the tumor necrosis factor-alpha gene (TNFA) promoter. Genes and Immunity, 2(2), 105-109. (Pubitemid 33674236)
    • (2001) Genes and Immunity , vol.2 , Issue.2 , pp. 105-109
    • Hohjoh, H.1    Tokunaga, K.2
  • 30
    • 77952237145 scopus 로고    scopus 로고
    • Rapid diagnosis of spinal muscular atrophy using tetra-primer ARMS PCR assay: Simultaneous detection of SMN1 and SMN2 deletion
    • Baris, I., Etlik, O., Koksal, V., & Arican-Baris, S. T. (2010). Rapid diagnosis of spinal muscular atrophy using tetra-primer ARMS PCR assay: Simultaneous detection of SMN1 and SMN2 deletion. Molecular and Cellular Probes, 24(3), 138-141.
    • (2010) Molecular and Cellular Probes , vol.24 , Issue.3 , pp. 138-141
    • Baris, I.1    Etlik, O.2    Koksal, V.3    Arican-Baris, S.T.4
  • 31
    • 77949271505 scopus 로고    scopus 로고
    • Evidence for a new allele at the SERCA1 locus affecting pork meat quality in part through the imbalance of Ca2+ homeostasis
    • Chai, J., Xiong, Q., Zhang, P. P., Shang, Y. Y., Zheng, R., Peng, J., et al. (2010). Evidence for a new allele at the SERCA1 locus affecting pork meat quality in part through the imbalance of Ca2+ homeostasis. Molecular Biology Reports, 37(1), 613-619.
    • (2010) Molecular Biology Reports , vol.37 , Issue.1 , pp. 613-619
    • Chai, J.1    Xiong, Q.2    Zhang, P.P.3    Shang, Y.Y.4    Zheng, R.5    Peng, J.6


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