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Volumn 2014, Issue , 2014, Pages

A performance/cost evaluation for a GPU-based drug discovery application on volunteer computing

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOINFORMATICS; COMPUTER GRAPHICS; DRUG DEVELOPMENT; ENERGY CONSUMPTION; GRAPHICS PROCESSING UNIT; MEDICAL INFORMATION SYSTEM; MONTE CARLO METHOD; POWER SUPPLY; RESPONSE TIME; ROOM TEMPERATURE; VOLUNTEER COMPUTING; BIOLOGY; COMPUTER ANALYSIS; COMPUTER PROGRAM; FACTUAL DATABASE; HUMAN; PROCEDURES;

EID: 84904210667     PISSN: 23146133     EISSN: 23146141     Source Type: Journal    
DOI: 10.1155/2014/474219     Document Type: Article
Times cited : (9)

References (23)
  • 1
    • 84875064754 scopus 로고    scopus 로고
    • High-throughput parallel blind virtual screening using BINDSURF
    • article S13 2-s2.0-84875064754 10.1186/1471-2105-13-S14-S13
    • Sánchez-Linares I., Pérez-Sánchez H., Cecilia J. M., García J. M., High-throughput parallel blind virtual screening using BINDSURF. BMC Bioinformatics 2012 13 supplement 14, article S13 2-s2.0-84875064754 10.1186/1471-2105-13-S14-S13
    • (2012) BMC Bioinformatics , vol.13 , Issue.SUPPLEMENT 14
    • Sánchez-Linares, I.1    Pérez-Sánchez, H.2    Cecilia, J.M.3    García, J.M.4
  • 2
    • 0029633168 scopus 로고
    • GROMACS: A message-passing parallel molecular dynamics implementation
    • 2-s2.0-0029633168
    • Berendsen H. J. C., van der Spoel D., van Drunen R., GROMACS: a message-passing parallel molecular dynamics implementation. Computer Physics Communications 1995 91 1-3 43 56 2-s2.0-0029633168
    • (1995) Computer Physics Communications , vol.91 , Issue.1-3 , pp. 43-56
    • Berendsen, H.J.C.1    Van Der Spoel, D.2    Van Drunen, R.3
  • 4
    • 33947588048 scopus 로고    scopus 로고
    • A survey of general-purpose computation on graphics hardware
    • DOI 10.1111/j.1467-8659.2007.01012.x
    • Owens J. D., Luebke D., Govindaraju N., Harris M., Krüger J., Lefohn A. E., Purcell T. J., A survey of general-purpose computation on graphics hardware. Computer Graphics Forum 2007 26 1 80 113 2-s2.0-33947588048 10.1111/j.1467-8659.2007.01012.x (Pubitemid 46481097)
    • (2007) Computer Graphics Forum , vol.26 , Issue.1 , pp. 80-113
    • Owens, J.D.1    Luebke, D.2    Govindaraju, N.3    Harris, M.4    Kruger, J.5    Lefohn, A.E.6    Purcell, T.J.7
  • 6
    • 77955715381 scopus 로고    scopus 로고
    • SHEsisEpi, a GPU-enhanced genome-wide SNP-SNP interaction scanning algorithm, efficiently reveals the risk genetic epistasis in bipolar disorder
    • 2-s2.0-77955715381 10.1038/cr.2010.68
    • Hu X., Liu Q., Zhang Z., Li Z., Wang S., He L., Shi Y., SHEsisEpi, a GPU-enhanced genome-wide SNP-SNP interaction scanning algorithm, efficiently reveals the risk genetic epistasis in bipolar disorder. Cell Research 2010 20 7 854 857 2-s2.0-77955715381 10.1038/cr.2010.68
    • (2010) Cell Research , vol.20 , Issue.7 , pp. 854-857
    • Hu, X.1    Liu, Q.2    Zhang, Z.3    Li, Z.4    Wang, S.5    He, L.6    Shi, Y.7
  • 7
    • 77955868506 scopus 로고    scopus 로고
    • Computational solutions to large-scale data management and analysis
    • 2-s2.0-77955868506 10.1038/nrg2857
    • Schadt E. E., Linderman M. D., Sorenson J., Lee L., Nolan G. P., Computational solutions to large-scale data management and analysis. Nature Reviews Genetics 2010 11 9 647 657 2-s2.0-77955868506 10.1038/nrg2857
    • (2010) Nature Reviews Genetics , vol.11 , Issue.9 , pp. 647-657
    • Schadt, E.E.1    Linderman, M.D.2    Sorenson, J.3    Lee, L.4    Nolan, G.P.5
  • 8
    • 84876920763 scopus 로고    scopus 로고
    • Accelerating fibre orientation estimation from diffusion weighted magnetic resonance imaging using gpus
    • 2-s2.0-84876920763 10.1371/journal.pone.0061892 e61892
    • Hernández M., Guerrero G. D., Cecilia J. M., García J. M., Inuggi A., Jbabdi S., Behrens T. E. J., Sotiropoulos S. N., Accelerating fibre orientation estimation from diffusion weighted magnetic resonance imaging using gpus. PLoS ONE 2013 8 4 2-s2.0-84876920763 10.1371/journal.pone.0061892 e61892
    • (2013) PLoS ONE , vol.8 , Issue.4
    • Hernández, M.1    Guerrero, G.D.2    Cecilia, J.M.3    García, J.M.4    Inuggi, A.5    Jbabdi, S.6    Behrens, T.E.J.7    Sotiropoulos, S.N.8
  • 9
    • 77957572546 scopus 로고    scopus 로고
    • Challenges in protein-folding simulations
    • 2-s2.0-77957572546 10.1038/nphys1713
    • Freddolino P. L., Harrison C. B., Liu Y., Schulten K., Challenges in protein-folding simulations. Nature Physics 2010 6 10 751 758 2-s2.0-77957572546 10.1038/nphys1713
    • (2010) Nature Physics , vol.6 , Issue.10 , pp. 751-758
    • Freddolino, P.L.1    Harrison, C.B.2    Liu, Y.3    Schulten, K.4
  • 10
    • 84904172142 scopus 로고    scopus 로고
    • The Top500 superComputers website
    • The Top500 superComputers website, http://www.top500.org/
  • 11
    • 35348835964 scopus 로고    scopus 로고
    • Power provisioning for a warehouse-sized computer
    • DOI 10.1145/1250662.1250665, ISCA'07: 34th Annual International Symposium on Computer Architecture, Conference Proceedings
    • Fan X., Weber W. D., Barroso L. A., Power provisioning for a warehouse-sized computer. Proceedings of the 34th Annual International Symposium on Computer Architecture (ISCA '07) 2007 New York, NY, USA ACM 13 23 10.1145/1250662.1250665 (Pubitemid 47582087)
    • (2007) Proceedings - International Symposium on Computer Architecture , pp. 13-23
    • Fan, X.1    Weber, W.-D.2    Barroso, L.A.3
  • 12
    • 64349099995 scopus 로고    scopus 로고
    • The green500 list: Encouraging sustainable supercomputing
    • 2-s2.0-64349099995 10.1109/MC.2007.445
    • Feng W.-C., Cameron K. W., The green500 list: encouraging sustainable supercomputing. Computer 2007 40 12 50 55 2-s2.0-64349099995 10.1109/MC.2007.445
    • (2007) Computer , vol.40 , Issue.12 , pp. 50-55
    • Feng, W.-C.1    Cameron, K.W.2
  • 15
    • 10444272266 scopus 로고    scopus 로고
    • BOINC: A system for public-resource computing and storage
    • November 2004 IEEE 2-s2.0-10444272266 10.1109/GRID.2004.14
    • Anderson D. P., BOINC: a system for public-resource computing and storage. Proceedings of the 5th IEEE/ACM International Workshop on Grid Computing November 2004 IEEE 4 10 2-s2.0-10444272266 10.1109/GRID.2004.14
    • Proceedings of the 5th IEEE/ACM International Workshop on Grid Computing , pp. 4-10
    • Anderson, D.P.1
  • 17
    • 0037995929 scopus 로고    scopus 로고
    • SETI@home: An Experiment in Public-Resource Computing
    • DOI 10.1145/581571.581573
    • Anderson D. P., Cobb J., Korpela E., Lebofsky M., Werthimer D., SETIhome: an experiment in public-resource computing. Communications of the ACM 2002 45 11 56 61 2-s2.0-0037995929 10.1145/581571.581573 (Pubitemid 135702626)
    • (2002) Communications of the ACM , vol.45 , Issue.11 , pp. 56-61
    • Anderson, D.P.1    Cobb, J.2    Korpela, E.3    Lebofsky, M.4    Werthimer, D.5
  • 21
    • 84904151454 scopus 로고    scopus 로고
    • Nvidia corporation, nvml api reference
    • Nvidia corporation, nvml api reference, http://developer.download.nvidia. com/assets/cuda/files/CUDADownloads/NVML/nvml.pdf
  • 22
    • 84904195237 scopus 로고    scopus 로고
    • Wattup.net power meter
    • Wattup.net power meter, https://www.wattsupmeters.com/secure/index.php
  • 23
    • 77952162137 scopus 로고    scopus 로고
    • OpenCL: A parallel programming standard for heterogeneous computing systems
    • 2-s2.0-77952162137 10.1109/MCSE.2010.69
    • Stone J. E., Gohara D., Shi G., OpenCL: a parallel programming standard for heterogeneous computing systems. Computing in Science and Engineering 2010 12 3 66 73 2-s2.0-77952162137 10.1109/MCSE.2010.69
    • (2010) Computing in Science and Engineering , vol.12 , Issue.3 , pp. 66-73
    • Stone, J.E.1    Gohara, D.2    Shi, G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.