-
1
-
-
0033613342
-
Reemergence of HIV after stopping therapy
-
Chun TW, Davey RT Jr, Engel D, Lane HC, Fauci AS. Reemergence of HIV after stopping therapy. Nature 1999 401874-875.
-
(1999)
Nature
, vol.401
, pp. 874-875
-
-
Chun, T.W.1
Davey Jr., R.T.2
Engel, D.3
Lane, H.C.4
Fauci, A.S.5
-
2
-
-
3543008920
-
High-resolution genome-wide mapping of histone modifications
-
Roh TY, Ngau WC, Cui K, Landsman D, Zhao K. High-resolution genome-wide mapping of histone modifications. Nat Biotechnol 2004 221013-1016.
-
(2004)
Nat Biotechnol
, vol.22
, pp. 1013-1016
-
-
Roh, T.Y.1
Ngau, W.C.2
Cui, K.3
Landsman, D.4
Zhao, K.5
-
3
-
-
14644406272
-
Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping
-
Roh TY, Cuddapah S, Zhao K. Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping. Genes Dev 2005 19542-552.
-
(2005)
Genes Dev
, vol.19
, pp. 542-552
-
-
Roh, T.Y.1
Cuddapah, S.2
Zhao, K.3
-
4
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
Barski A, Cuddapah S, Cui KR, Roh TY, Schones DE, Wang ZB, et al. High-resolution profiling of histone methylations in the human genome. Cell 2007 129823-837.
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.R.3
Roh, T.Y.4
Schones, D.E.5
Wang, Z.B.6
-
5
-
-
39749145198
-
Dynamic regulation of nucleosome positioning in the human genome
-
Schones DE, Cui K, Cuddapah S, Roh TY, Barski A, Wang Z, et al. Dynamic regulation of nucleosome positioning in the human genome. Cell 2008 132887-898.
-
(2008)
Cell
, vol.132
, pp. 887-898
-
-
Schones, D.E.1
Cui, K.2
Cuddapah, S.3
Roh, T.Y.4
Barski, A.5
Wang, Z.6
-
6
-
-
84863986133
-
Functions of DNA methylation islands, start sites, gene bodies and beyond
-
Jones PA. Functions of DNA methylation islands, start sites, gene bodies and beyond. Nat Rev Genet 2012 13484-492.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 484-492
-
-
Jones, P.A.1
-
7
-
-
84886743766
-
ENCODE a sourcebook of epigenomes and chromatin language
-
Yavartanoo M, Choi JK. ENCODE a sourcebook of epigenomes and chromatin language. Genomics Inform 2013 11 2-6.
-
(2013)
Genomics Inform
, vol.11
, pp. 2-6
-
-
Yavartanoo, M.1
Choi, J.K.2
-
8
-
-
84885470947
-
Characterization of chromatin structure-associated histone modifications in breast cancer cells
-
Hong CP, Choe MK, Roh TY. Characterization of chromatin structure-associated histone modifications in breast cancer cells. Genomics Inform 2012 10145-152.
-
(2012)
Genomics Inform
, vol.10
, pp. 145-152
-
-
Hong, C.P.1
Choe, M.K.2
Roh, T.Y.3
-
9
-
-
84870375316
-
Histone lysine methylation dynamics establishment, regulation, and biological impact
-
Black JC, Van Rechem C, Whetstine JR. Histone lysine methylation dynamics establishment, regulation, and biological impact. Molecular Cell 2012 48491-507.
-
(2012)
Molecular Cell
, vol.48
, pp. 491-507
-
-
Black, J.C.1
Van Rechem, C.2
Whetstine, J.R.3
-
10
-
-
66449113383
-
Histone acetylation where to go and how to get there
-
MacDonald VE, Howe LJ. Histone acetylation where to go and how to get there. Epigenetics 2009 4139-143.
-
(2009)
Epigenetics
, vol.4
, pp. 139-143
-
-
MacDonald, V.E.1
Howe, L.J.2
-
11
-
-
84886676923
-
Epigenetics of HIV infection promising research areas and implications for therapy
-
Ay E, Banati F, Mezei M, Bakos A, Niller HH, Buzas K, et al. Epigenetics of HIV infection promising research areas and implications for therapy. AIDS Rev 2013 15181-188.
-
(2013)
AIDS Rev
, vol.15
, pp. 181-188
-
-
Ay, E.1
Banati, F.2
Mezei, M.3
Bakos, A.4
Niller, H.H.5
Buzas, K.6
-
12
-
-
33644507479
-
Transcription factor YY1 structure, function, and therapeutic implications in cancer biology
-
Gordon S, Akopyan G, Garban H, Bonavida B. Transcription factor YY1 structure, function, and therapeutic implications in cancer biology. Oncogene 2006 251125-1142.
-
(2006)
Oncogene
, vol.25
, pp. 1125-1142
-
-
Gordon, S.1
Akopyan, G.2
Garban, H.3
Bonavida, B.4
-
13
-
-
4944266947
-
Polyamides reveal a role for repression in latency within resting T cells of HIV-infected donors
-
Ylisastigui L, Coull JJ, Rucker VC, Melander C, Bosch RJ, Brodie SJ, et al. Polyamides reveal a role for repression in latency within resting T cells of HIV-infected donors. J Infect Dis 2004 1901429-1437.
-
(2004)
J Infect Dis
, vol.190
, pp. 1429-1437
-
-
Ylisastigui, L.1
Coull, J.J.2
Rucker, V.C.3
Melander, C.4
Bosch, R.J.5
Brodie, S.J.6
-
14
-
-
30444431914
-
NF-kappaB p50 promotes HIV latency through HDAC recruitment and repression of transcriptional initiation
-
Williams SA, Chen LF, Kwon H, Ruiz-Jarabo CM, Verdin E, Greene WC. NF-kappaB p50 promotes HIV latency through HDAC recruitment and repression of transcriptional initiation. EMBO J 2006 25139-149.
-
(2006)
EMBO J
, vol.25
, pp. 139-149
-
-
Williams, S.A.1
Chen, L.F.2
Kwon, H.3
Ruiz-Jarabo, C.M.4
Verdin, E.5
Greene, W.C.6
-
15
-
-
35148858784
-
C-Myc and Sp1 contribute to proviral latency by recruiting histone deacetylase 1 to the human immunodeficiency virus type 1 promoter
-
Jiang G, Espeseth A, Hazuda DJ, Margolis DM. c-Myc and Sp1 contribute to proviral latency by recruiting histone deacetylase 1 to the human immunodeficiency virus type 1 promoter. J Virol 2007 8110914-10923.
-
(2007)
J Virol
, vol.81
, pp. 10914-10923
-
-
Jiang, G.1
Espeseth, A.2
Hazuda, D.J.3
Margolis, D.M.4
-
16
-
-
84857948627
-
The viral protein Tat can inhibit the establishment of HIV-1 latency
-
Donahue DA, Kuhl BD, Sloan RD, Wainberg MA. The viral protein Tat can inhibit the establishment of HIV-1 latency. J Virol 2012 863253-3263.
-
(2012)
J Virol
, vol.86
, pp. 3253-3263
-
-
Donahue, D.A.1
Kuhl, B.D.2
Sloan, R.D.3
Wainberg, M.A.4
-
17
-
-
33750488431
-
The genomic landscape of histone modifications in human T cells
-
Roh TY, Cuddapah S, Cui K, Zhao K. The genomic landscape of histone modifications in human T cells. Proc Natl Acad Sci USA 2006 10315782-15787.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 15782-15787
-
-
Roh, T.Y.1
Cuddapah, S.2
Cui, K.3
Zhao, K.4
-
18
-
-
33846006550
-
Genome-wide prediction of conserved and nonconserved enhancers by histone acetylation patterns
-
Roh TY, Wei G, Farrell CM, Zhao K. Genome-wide prediction of conserved and nonconserved enhancers by histone acetylation patterns. Genome Res 2007 1774-81.
-
(2007)
Genome Res
, vol.17
, pp. 74-81
-
-
Roh, T.Y.1
Wei, G.2
Farrell, C.M.3
Zhao, K.4
-
19
-
-
79955086401
-
Gene silencing in HIV-1 latency by polycomb repressive group
-
Kim HG, Kim KC, Roh TY, Park J, Jung KM, Lee JS, et al. Gene silencing in HIV-1 latency by polycomb repressive group. Virol J 2011 8179.
-
(2011)
Virol J
, vol.8
, pp. 179
-
-
Kim, H.G.1
Kim, K.C.2
Roh, T.Y.3
Park, J.4
Jung, K.M.5
Lee, J.S.6
-
20
-
-
78651360646
-
The effect of CD4 receptor downregulation and its downstream signaling molecules on HIV-1 latency
-
Kim KC, Kim HG, Roh TY, Park J, Jung KM, Lee JS, et al. The effect of CD4 receptor downregulation and its downstream signaling molecules on HIV-1 latency. Biochem Biophys Res Commun 2011 404646-651.
-
(2011)
Biochem Biophys Res Commun
, vol.404
, pp. 646-651
-
-
Kim, K.C.1
Kim, H.G.2
Roh, T.Y.3
Park, J.4
Jung, K.M.5
Lee, J.S.6
-
21
-
-
84862828921
-
Functional elements demarcated by histone modifications in breast cancer cells
-
Choe MK, Hong CP, Park J, Seo SH, Roh TY. Functional elements demarcated by histone modifications in breast cancer cells. Biochem Biophys Res Commun 2012 418475-482.
-
(2012)
Biochem Biophys Res Commun
, vol.418
, pp. 475-482
-
-
Choe, M.K.1
Hong, C.P.2
Park, J.3
Seo, S.H.4
Roh, T.Y.5
-
22
-
-
67650711619
-
A clustering approach for identification of enriched domains from histone modification ChIP-Seq data
-
Zang C, Schones DE, Zeng C, Cui K, Zhao K, Peng W. A clustering approach for identification of enriched domains from histone modification ChIP-Seq data. Bioinformatics 2009 251952-1958.
-
(2009)
Bioinformatics
, vol.25
, pp. 1952-1958
-
-
Zang, C.1
Schones, D.E.2
Zeng, C.3
Cui, K.4
Zhao, K.5
Peng, W.6
-
23
-
-
2942552459
-
An automated method for finding molecular complexes in large protein interaction networks
-
Bader GD, Hogue CW. An automated method for finding molecular complexes in large protein interaction networks. BMC Bioinformatics 2003 42.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 2
-
-
Bader, G.D.1
Hogue, C.W.2
-
24
-
-
24044440971
-
BiNGO a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks
-
Maere S, Heymans K, Kuiper M. BiNGO a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks. Bioinformatics 2005 213448-3449.
-
(2005)
Bioinformatics
, vol.21
, pp. 3448-3449
-
-
Maere, S.1
Heymans, K.2
Kuiper, M.3
-
25
-
-
80052793248
-
Establishment of novel cell lines latently infected with human immunodeficiency virus 1
-
Oh YT, Kim KC, Hong KJ, Lee HS, Jang DH, Lee JS, et al. Establishment of novel cell lines latently infected with human immunodeficiency virus 1. Acta Virol 2011 55155-159.
-
(2011)
Acta Virol
, vol.55
, pp. 155-159
-
-
Oh, Y.T.1
Kim, K.C.2
Hong, K.J.3
Lee, H.S.4
Jang, D.H.5
Lee, J.S.6
-
26
-
-
68649099762
-
HIV integration site distributions in resting and activated CD4R T cells infected in culture
-
Brady T, Agosto LM, Malani N, Berry CC, O'Doherty U, Bushman F. HIV integration site distributions in resting and activated CD4R T cells infected in culture. AIDS 2009 231461-1471.
-
(2009)
AIDS
, vol.23
, pp. 1461-1471
-
-
Brady, T.1
Agosto, L.M.2
Malani, N.3
Berry, C.C.4
O'Doherty, U.5
Bushman, F.6
-
27
-
-
34547635063
-
HIV integration site selection analysis by massively parallel pyrosequencing reveals association with epigenetic modifications
-
Wang GP, Ciuffi A, Leipzig J, Berry CC, Bushman FD. HIV integration site selection analysis by massively parallel pyrosequencing reveals association with epigenetic modifications. Genome Res 2007 171186-1194.
-
(2007)
Genome Res
, vol.17
, pp. 1186-1194
-
-
Wang, G.P.1
Ciuffi, A.2
Leipzig, J.3
Berry, C.C.4
Bushman, F.D.5
-
29
-
-
84884989193
-
HIV latency and integration site placement in five cell-based models
-
Sherrill-Mix S, Lewinski MK, Famiglietti M, Bosque A, Malani N, Ocwieja KE, et al. HIV latency and integration site placement in five cell-based models. Retrovirology 2013 1090.
-
(2013)
Retrovirology
, vol.10
, pp. 90
-
-
Sherrill-Mix, S.1
Lewinski, M.K.2
Famiglietti, M.3
Bosque, A.4
Malani, N.5
Ocwieja, K.E.6
-
30
-
-
77957730576
-
Cell line-dependent variability in HIV activation employing DNMT inhibitors
-
Fernandez G, Zeichner SL. Cell line-dependent variability in HIV activation employing DNMT inhibitors. Virol J 2010 7266.
-
(2010)
Virol J
, vol.7
, pp. 266
-
-
Fernandez, G.1
Zeichner, S.L.2
-
31
-
-
70350148394
-
Understanding HIV-1 latency provides clues for the eradication of long-term reservoirs
-
Coiras M, Lopez-Huertas MR, Perez-Olmeda M, Alcami J. Understanding HIV-1 latency provides clues for the eradication of long-term reservoirs. Nat Rev Microbiol 2009 7798-812. Institute of Health
-
(2009)
Nat Rev Microbiol
, vol.7
, pp. 798-812
-
-
Coiras, M.1
Lopez-Huertas, M.R.2
Perez-Olmeda, M.3
Alcami, J.4
|