메뉴 건너뛰기




Volumn 5, Issue , 2014, Pages

Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits

Author keywords

[No Author keywords available]

Indexed keywords

IMMUNOGLOBULIN; TRANSCRIPTION FACTOR; TRANSFER RNA;

EID: 84903973976     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/ncomms5338     Document Type: Article
Times cited : (92)

References (52)
  • 3
    • 0033870603 scopus 로고    scopus 로고
    • Quantitative trait loci for life span in Drosophila melanogaster: Interactions with genetic background and larval density
    • Leips, J. & Mackay, T. F. C. Quantitative trait loci for life span in Drosophila melanogaster: Interactions with genetic background and larval density. Genetics 155, 1773-1788 (2000). (Pubitemid 30626395)
    • (2000) Genetics , vol.155 , Issue.4 , pp. 1773-1788
    • Leips, J.1    Mackay, T.F.C.2
  • 4
    • 0033979887 scopus 로고    scopus 로고
    • Genotype-environment interaction for quantitative trait loci affecting life span in Drosophila melanogaster
    • Vieira, C. et al. Genotype-environment interaction for quantitative trait loci affecting life span in Drosophila melanogaster. Genetics 154, 213-227 (2000). (Pubitemid 30045914)
    • (2000) Genetics , vol.154 , Issue.1 , pp. 213-227
    • Vieira, C.1    Pasyukova, E.G.2    Zeng, Z.-B.3    Hackett, J.B.4    Lyman, R.F.5    Mackay, T.F.C.6
  • 5
    • 0028816005 scopus 로고
    • Cost of mating in Drosophila melanogaster females is mediated by male accessory gland products
    • Chapman, T., Liddle, L. F., Kalb, J. M., Wolfner, M. F. & Partridge, L. Cost of mating in Drosophila melanogaster females is mediated by male accessory gland products. Nature 373, 241-244 (1995).
    • (1995) Nature , vol.373 , pp. 241-244
    • Chapman, T.1    Liddle, L.F.2    Kalb, J.M.3    Wolfner, M.F.4    Partridge, L.5
  • 7
    • 77957372576 scopus 로고    scopus 로고
    • Quantitative and molecular genetic analyses of mutations increasing Drosophila life span
    • Magwire, M. M. et al. Quantitative and molecular genetic analyses of mutations increasing Drosophila life span. PLoS Genet. 6, e1001037 (2010).
    • (2010) PLoS Genet , vol.6
    • Magwire, M.M.1
  • 8
    • 84863012360 scopus 로고    scopus 로고
    • The Drosophila melanogaster genetic reference panel
    • Mackay, T. F. C. et al. The Drosophila melanogaster genetic reference panel. Nature 482, 173-178 (2012).
    • (2012) Nature , vol.482 , pp. 173-178
    • Mackay, T.F.C.1
  • 9
    • 0030463128 scopus 로고    scopus 로고
    • Female fitness in Drosophila melanogaster: An interaction between the effect of nutrition and of encounter rate with males
    • Chapman, T. & Partridge, L. Female fitness in Drosophila melanogaster: an interaction between the effect of nutrition and of encounter rate with males. Proc. Biol. Sci. 263, 755-759 (1996).
    • (1996) Proc. Biol. Sci , vol.263 , pp. 755-759
    • Chapman, T.1    Partridge, L.2
  • 10
    • 0027880487 scopus 로고
    • Phenotypic plasticity and selection in Drosophila life-history evolution. I. Nutrition and the cost of reproduction
    • Chippindale, A. K., Leroi, A. M., Kim, S. B. & Rose, M. R. Phenotypic plasticity and selection in Drosophila life-history evolution. I. Nutrition and the cost of reproduction. J. Evol. Biol. 6, 171-193 (1993). (Pubitemid 24412855)
    • (1993) Journal of Evolutionary Biology , vol.6 , Issue.2 , pp. 171-193
    • Chippindale, A.K.1    Leroi, A.M.2    Kim, S.B.3    Rose, M.R.4
  • 11
    • 61349113311 scopus 로고    scopus 로고
    • Systems genetics of complex traits in Drosophila melanogaster
    • Ayroles, J. F. et al. Systems genetics of complex traits in Drosophila melanogaster. Nat. Genet. 41, 299-307 (2009).
    • (2009) Nat. Genet , vol.41 , pp. 299-307
    • Ayroles, J.F.1
  • 12
    • 79954628932 scopus 로고    scopus 로고
    • Ageing in Drosophila: The role of the insulin/Igf and TOR signalling network
    • Partridge, L., Alic, N., Bjedov, I. & Piper, M. D. W. Ageing in Drosophila: the role of the insulin/Igf and TOR signalling network. Exp. Gerontol. 46, 376-381 (2011).
    • (2011) Exp. Gerontol , vol.46 , pp. 376-381
    • Partridge, L.1    Alic, N.2    Bjedov, I.3    Piper, M.D.W.4
  • 13
    • 13844299867 scopus 로고    scopus 로고
    • Shuttle craft: A candidate quantitative trait gene for Drosophila lifespan
    • DOI 10.1111/j.1474-9728.2004.00114.x
    • Pasyukova, E. G., Roshina, N. V. & Mackay, T. F. C. Shuttle craft: a candidate quantitative trait gene for Drosophila lifespan. Aging Cell 3, 297-307 (2004). (Pubitemid 40246698)
    • (2004) Aging Cell , vol.3 , Issue.5 , pp. 297-307
    • Pasyukova, E.G.1    Roshina, N.V.2    Mackay, T.F.C.3
  • 15
    • 33646204592 scopus 로고    scopus 로고
    • Phenotypic variation and natural selection at Catsup, a pleiotropic quantitative trait gene in Drosophila
    • Carbone, M. A. et al. Phenotypic variation and natural selection at Catsup, a pleiotropic quantitative trait gene in Drosophila. Curr. Biol. 16, 912-919 (2006).
    • (2006) Curr. Biol , vol.16 , pp. 912-919
    • Carbone, M.A.1
  • 16
    • 33846858644 scopus 로고    scopus 로고
    • Candidate genes affecting Drosophila life span identified by integrating microarray gene expression analysis and QTL mapping
    • DOI 10.1016/j.mad.2006.12.003, PII S0047637406002806
    • Lai, C. Q., Parnell, L. D., Lyman, R. F., Ordovas, J. M. & Mackay, T. F. C. Candidate genes affecting Drosophila life span identified by integrating microarray gene expression analysis and QTL mapping. Mech. Ageing Dev. 128, 237-249 (2007). (Pubitemid 46227542)
    • (2007) Mechanisms of Ageing and Development , vol.128 , Issue.3 , pp. 237-249
    • Lai, C.-Q.1    Parnell, L.D.2    Lyman, R.F.3    Ordovas, J.M.4    Mackay, T.F.C.5
  • 17
    • 34547631266 scopus 로고    scopus 로고
    • Temporal and spatial transcriptional profiles of aging in Drosophila melanogaster
    • DOI 10.1101/gr.6216607
    • Zhan, M. et al. Temporal and spatial transcriptional profiles of aging in Drosophila melanogaster. Genome Res. 17, 1236-1243 (2007). (Pubitemid 47204868)
    • (2007) Genome Research , vol.17 , Issue.8 , pp. 1236-1243
    • Zhan, M.1    Yamaza, H.2    Sun, Y.3    Sinclair, J.4    Li, H.5    Zou, S.6
  • 18
    • 84868134353 scopus 로고    scopus 로고
    • Genomic basis of aging and life-history evolution in Drosophila melanogaster
    • Remolina, S. C., Chang, P. L., Leips, J., Nuzhdin, S. V. & Hughes, K. A. Genomic basis of aging and life-history evolution in Drosophila melanogaster. Evolution 66, 3390-3403 (2012).
    • (2012) Evolution , vol.66 , pp. 3390-3403
    • Remolina, S.C.1    Chang, P.L.2    Leips, J.3    Nuzhdin, S.V.4    Hughes, K.A.5
  • 19
    • 33645243072 scopus 로고    scopus 로고
    • Quantitative trait loci with age-specific effects on fecundity in Drosophila melanogaster
    • Leips, J., Gilligan, P. & Mackay, T. F. C. Quantitative trait loci with age-specific effects on fecundity in Drosophila melanogaster. Genetics 172, 1595-1605 (2006).
    • (2006) Genetics , vol.172 , pp. 1595-1605
    • Leips, J.1    Gilligan, P.2    Mackay, T.F.C.3
  • 20
    • 0031926383 scopus 로고    scopus 로고
    • Heritable variation for fecundity in field-collected Drosophila melanogaster and their offspring reared under different environmental temperatures
    • Sgró, C. M. & Hoffmann, A. A. Heritable variation for fecundity in field-collected Drosophila melanogaster and their offspring reared under different environmental temperatures. Evolution 52, 134-143 (1998). (Pubitemid 28195155)
    • (1998) Evolution , vol.52 , Issue.1 , pp. 134-143
    • Sgro, C.M.1    Hoffmann, A.A.2
  • 21
    • 0019347750 scopus 로고
    • Genetics of life history in Drosophila melanogaster. II. Exploratory selection experiments
    • Rose, M. R. & Charlesworth, B. Genetics of life history in Drosophila melanogaster. II. Exploratory selection experiments. Genetics 97, 187-196 (1981).
    • (1981) Genetics , vol.97 , pp. 187-196
    • Rose, M.R.1    Charlesworth, B.2
  • 22
    • 0029894480 scopus 로고    scopus 로고
    • Age-specific patterns of genetic variance in Drosophila melanogaster. II. Fecundity and its genetic covariance with age-specific mortality
    • Tatar, M., Promislow, D. E. L., Khazaeli, A. A. & Curtsinger, J. W. Age-specific patterns of genetic variance in Drosophila melanogaster. II. Fecundity and its genetic covariance with age-specific mortality. Genetics 143, 849-858 (1996). (Pubitemid 26172482)
    • (1996) Genetics , vol.143 , Issue.2 , pp. 849-858
    • Tatar, M.1    Promislow, D.E.L.2    Khazaeli, A.A.3    Curtsinger, J.W.4
  • 23
    • 47049101814 scopus 로고    scopus 로고
    • Dietary composition specifies consumption, obesity, and lifespan in Drosophila melanogaster
    • DOI 10.1111/j.1474-9726.2008.00400.x
    • Skorupa, D., Dervisefendic, A., Zwiener, J. & Pletcher, S. D. Dietary composition specifies consumption, obesity, and lifespan in Drosophila melanogaster. Aging Cell 7, 478-490 (2008). (Pubitemid 351998608)
    • (2008) Aging Cell , vol.7 , Issue.4 , pp. 478-490
    • Skorupa, D.A.1    Dervisefendic, A.2    Zwiener, J.3    Pletcher, S.D.4
  • 25
    • 77955299452 scopus 로고    scopus 로고
    • Age- and diet-specific effects of variation at S6 kinase on life history, metabolic, and immune response traits in Drosophila melanogaster
    • Cho, I. et al. Age- and diet-specific effects of variation at S6 kinase on life history, metabolic, and immune response traits in Drosophila melanogaster. DNA Cell. Biol. 29, 473-485 (2010).
    • (2010) DNA Cell. Biol , vol.29 , pp. 473-485
    • Cho, I.1
  • 26
    • 84863875322 scopus 로고    scopus 로고
    • Age-specific variation in immune response in Drosophila melanogaster has a genetic basis
    • Felix, T. M., Hughes, K. A., Stone, E. A., Drnevich, J. M. & Leips, J. Age-specific variation in immune response in Drosophila melanogaster has a genetic basis. Genetics 191, 989-1002 (2012).
    • (2012) Genetics , vol.191 , pp. 989-1002
    • Felix, T.M.1    Hughes, K.A.2    Stone, E.A.3    Drnevich, J.M.4    Leips, J.5
  • 27
    • 0026540999 scopus 로고
    • Comparing evolvability and variability of quantitative traits
    • Houle, D. Comparing evolvability and variability of quantitative traits. Genetics 130, 195-204 (1992).
    • (1992) Genetics , vol.130 , pp. 195-204
    • Houle, D.1
  • 28
    • 84892492038 scopus 로고    scopus 로고
    • Genome-wide association study of extreme longevity in Drosophila melanogaster
    • Burke, M. K., King, E. G., Shahrestani, P., Rose, M. R. & Long, A. D. Genome-wide association study of extreme longevity in Drosophila melanogaster. Genome Biol. Evol. 6, 1-11 (2014).
    • (2014) Genome Biol. Evol , vol.6 , pp. 1-11
    • Burke, M.K.1    King, E.G.2    Shahrestani, P.3    Rose, M.R.4    Long, A.D.5
  • 29
    • 36048966491 scopus 로고    scopus 로고
    • FlyMine: An integrated database for Drosophila and Anopheles genomics
    • Lyne, R. et al. FlyMine: an integrated database for Drosophila and Anopheles genomics. Genome. Biol. 8, R129 (2007).
    • (2007) Genome. Biol , vol.8
    • Lyne, R.1
  • 30
    • 1142269467 scopus 로고    scopus 로고
    • Age-related thymic involution in C57BL/6J- DBA/2J recombinant-inbred mice maps to mouse chromosomes 9 and 10
    • Hsu, H. et al. Age-related thymic involution in C57BL/6J- DBA/2J recombinant-inbred mice maps to mouse chromosomes 9 and 10. Genes Immun. 4, 402-410 (2003).
    • (2003) Genes Immun , vol.4 , pp. 402-410
    • Hsu, H.1
  • 35
    • 0000977247 scopus 로고
    • Laboratory evolution of postponed senescence in Drosophila melanogaster
    • Rose, M. R. Laboratory evolution of postponed senescence in Drosophila melanogaster. Evolution 38, 1004-1010 (1984).
    • (1984) Evolution , vol.38 , pp. 1004-1010
    • Rose, M.R.1
  • 36
    • 0028843224 scopus 로고
    • The evolutionary genetics of male life-history characters in Drosophila melanogaster
    • Hughes, K. A. The evolutionary genetics of male life-history characters in Drosophila melanogaster. Evolution 49, 521-537 (1995).
    • (1995) Evolution , vol.49 , pp. 521-537
    • Hughes, K.A.1
  • 37
    • 66749185404 scopus 로고    scopus 로고
    • What can genetic variation tell us about the evolution of senescence?
    • Moorad, J. A. & Promislow, D. E. L.What can genetic variation tell us about the evolution of senescence? Proc. Biol. Sci. 276, 2271-2278 (2009).
    • (2009) Proc. Biol. Sci , vol.276 , pp. 2271-2278
    • Moorad, J.A.1    Promislow, D.E.L.2
  • 38
    • 77951601845 scopus 로고    scopus 로고
    • Mutation and the evolution of ageing: From biometrics to system genetics
    • Hughes, K. A. Mutation and the evolution of ageing: from biometrics to system genetics. Philos. Trans. R Soc. Lond B Biol. Sci. 365, 1273-1279 (2010).
    • (2010) Philos. Trans. R Soc. Lond B Biol. Sci , vol.365 , pp. 1273-1279
    • Hughes K., .A.1
  • 39
    • 77749277117 scopus 로고    scopus 로고
    • Identification of a candidate adaptive polymorphism for Drosophila life history by parallel independent clines on two continents
    • Paaby, A. B., Blacket, M. J., Hoffmann, A. A. & Schmidt, P. S. Identification of a candidate adaptive polymorphism for Drosophila life history by parallel independent clines on two continents. Mol. Ecol. 19, 760-774 (2010).
    • (2010) Mol. Ecol , vol.19 , pp. 760-774
    • Paaby, A.B.1    Blacket, M.J.2    Hoffmann, A.A.3    Schmidt, P.S.4
  • 40
    • 44849103119 scopus 로고    scopus 로고
    • Functional significance of allelic variation at methuselah, an aging gene in Drosophila
    • Paaby, A. B. & Schmidt, P. S. Functional significance of allelic variation at methuselah, an aging gene in Drosophila. PLoS ONE 3, e1987 (2008).
    • (2008) PLoS ONE , vol.3
    • Paaby, A.B.1    Schmidt, P.S.2
  • 41
    • 84860582975 scopus 로고    scopus 로고
    • Fine-scale mapping of natural variation in fly fecundity identifies neuronal domain of expression and function of an aquaporin
    • Bergland, A. O., Chae, H.-S., Kim, Y.-J. & Tatar, M. Fine-scale mapping of natural variation in fly fecundity identifies neuronal domain of expression and function of an aquaporin. PLoS Genet. 8, e1002631 (2012).
    • (2012) PLoS Genet , vol.8
    • Bergland, A.O.1    Chae, H.-S.2    Kim, Y.-J.3    Tatar, M.4
  • 42
    • 79956306310 scopus 로고    scopus 로고
    • Sex-dependent modulation of longevity by two Drosophila homologues of human Apolipoprotein D
    • Ruiz, M., Sanchez, D., Canal, I., Acebes, A. & Ganfornina, M. D. Sex-dependent modulation of longevity by two Drosophila homologues of human Apolipoprotein D, GLaz and NLaz. Exp. Gerontol. 46, 579-589 (2011).
    • (2011) GLaz and NLaz. Exp. Gerontol , vol.46 , pp. 579-589
    • Ruiz, M.1    Sanchez, D.2    Canal, I.3    Acebes, A.4    Ganfornina, M.D.5
  • 43
    • 77749264562 scopus 로고    scopus 로고
    • Sestrin as a feedback inhibitor of TOR that prevents age-related pathologies
    • Lee, J. H. et al. Sestrin as a feedback inhibitor of TOR that prevents age-related pathologies. Science 327, 1223-1228 (2010).
    • (2010) Science , vol.327 , pp. 1223-1228
    • Lee, J.H.1
  • 44
    • 84883523158 scopus 로고    scopus 로고
    • Neuronal inputs and outputs of aging and longevity
    • Alcedo, J., Flatt, T. & Pasyukova, E. G. Neuronal inputs and outputs of aging and longevity. Front. Genet. 4, 1-14 (2013).
    • (2013) Front. Genet , vol.4 , pp. 1-14
    • Alcedo, J.1    Flatt, T.2    Pasyukova, E.G.3
  • 45
    • 0842301324 scopus 로고    scopus 로고
    • Active Zone Localization of Presynaptic Calcium Channels Encoded by the cacophony Locus of Drosophila
    • DOI 10.1523/JNEUROSCI.3553-03.2004
    • Kawasaki, F., Zou, B., Xu, X. & Ordway, R. W. Active zone localization of presynaptic calcium channels encoded by the cacophony locus of Drosophila. J. Neurosci. 24, 282-285 (2004). (Pubitemid 38181692)
    • (2004) Journal of Neuroscience , vol.24 , Issue.1 , pp. 282-285
    • Kawasaki, F.1    Zou, B.2    Xu, X.3    Ordway, R.W.4
  • 46
    • 84872760710 scopus 로고    scopus 로고
    • Age-dependent alterations in the presynaptic active zone in a Drosophila model of Alzheimer's Disease
    • Huang, J.-K. et al. Age-dependent alterations in the presynaptic active zone in a Drosophila model of Alzheimer's Disease. Neurobiol. Dis. 51, 161-167 (2013).
    • (2013) Neurobiol. Dis , vol.51 , pp. 161-167
    • Huang, J.-K.1
  • 48
    • 0022841138 scopus 로고
    • Unidirectional incompatibility between populations of Drosophila simulans
    • Hoffmann, A. A., Turelli, M. & Simmons, G. M. Unidirectional incompatibility between populations of Drosophila simulans. Evolution 40, 692-701 (1986).
    • (1986) Evolution , vol.40 , pp. 692-701
    • Hoffmann, A.A.1    Turelli, M.2    Simmons, G.M.3
  • 49
    • 58149143149 scopus 로고    scopus 로고
    • The bacterial symbiont Wolbachia induces resistance to RNA viral infections in Drosophila melanogaster
    • Teixeira, L., Ferreira, Á . & Ashburner, M. The bacterial symbiont Wolbachia induces resistance to RNA viral infections in Drosophila melanogaster. PLoS Biol. 6, e1000002 (2008).
    • (2008) PLoS Biol , vol.6
    • Teixeira, L.1    Ferreira, Á.2    Ashburner, M.3
  • 51
    • 0028030424 scopus 로고
    • Insulating DNA directs ubiquitous transcription of the Drosophila melanogaster α1-tubulin gene
    • O'Donnell, K. H., Chen, C. T. & Wensink, P. C. Insulating DNA directs ubiquitous transcription of the Drosophila melanogaster alpha 1-tubulin gene. Mol. Cell. Biol. 14, 6398-6408 (1994). (Pubitemid 24264468)
    • (1994) Molecular and Cellular Biology , vol.14 , Issue.9 , pp. 6398-6408
    • O'Donnell, K.H.1    Chen, C.-T.2    Wensink, P.C.3
  • 52
    • 0009663357 scopus 로고
    • A multiple comparison procedure for comparing several treatments with a control
    • Dunnett, C. W. A multiple comparison procedure for comparing several treatments with a control. J. Am. Stat. Assoc. 50, 1096-1121 (1955).
    • (1955) J. Am. Stat. Assoc , vol.50 , pp. 1096-1121
    • Dunnett, C.W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.