The tetratricopeptide repeat-containing protein slow green1 is required for chloroplast development in Arabidopsis

Journal of Experimental Botany

Volumn 65, Issue 4, 2014, Pages 1111-1123

  Hu, Zhihong ^a   Xu, Fan ^a   Guan, Liping ^a   Qian, Pingping ^a   Liu, Yaqiong ^a   Zhang, Huifang ^a   Huang, Yan ^a   Hou, Suiwen ^a,b  

^a LANZHOU UNIVERSITY   (China)

^b INSTITUTE OF PLANT PHYSIOLOGY AND ECOLOGY   (China)

Author keywords

Albino; Arabidopsis thaliana; chloroplast development; proplastid to chloroplast transition; slow greening; tetratricopeptide repeat containing protein.

Indexed keywords

ARABIDOPSIS PROTEIN; ASI1 PROTEIN, ARABIDOPSIS; CHLOROPHYLL; DNA BINDING PROTEIN; GUN1 PROTEIN, ARABIDOPSIS; GUN4 PROTEIN, ARABIDOPSIS; RNA BINDING PROTEIN; SIGNAL PEPTIDE;

ALBINO; ARABIDOPSIS; ARABIDOPSIS THALIANA; ARTICLE; CHLOROPLAST; CHLOROPLAST DEVELOPMENT; CHROMOSOME MAP; GENE EXPRESSION REGULATION; GENETIC COMPLEMENTATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MUTATION; PHENOTYPE; PHOTOSYNTHESIS; PLANT LEAF; PROPLASTID TO CHLOROPLAST TRANSITION; REPORTER GENE; SEEDLING; SLOW GREENING; TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN.; TRANSGENIC PLANT; ULTRASTRUCTURE;

ALBINO; ARABIDOPSIS THALIANA; CHLOROPLAST DEVELOPMENT; PROPLASTID TO CHLOROPLAST TRANSITION; SLOW GREENING; TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN.;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; CHLOROPHYLL; CHLOROPLASTS; CHROMOSOME MAPPING; DNA-BINDING PROTEINS; GENE EXPRESSION REGULATION, PLANT; GENES, REPORTER; GENETIC COMPLEMENTATION TEST; INTRACELLULAR SIGNALING PEPTIDES AND PROTEINS; MUTATION; PHENOTYPE; PHOTOSYNTHESIS; PLANT LEAVES; PLANTS, GENETICALLY MODIFIED; RNA-BINDING PROTEINS; SEEDLING;

EID: 84903362722     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/ert463     Document Type: Article

References (57)

1. Abdallah F, Salamini F, Leister D. 2000. A prediction of the size and evolutionary origin of the proteome of chloroplasts of Arabidopsis. Trends in Plant Science 5, 141-142..
2. Albrecht V, Ingenfeld A, Apel K. 2006. Characterization of the snowy cotyledon 1 mutant of Arabidopsis thaliana: the impact of chloroplast elongation factor G on chloroplast development and plant vitality. Plant Molecular Biology 60, 507-518..
3. Albrecht V, Ingenfeld A, Apel K. 2008. Snowy cotyledon 2: the identification of a zinc finger domain protein essential for chloroplast development in cotyledons but not in true leaves. Plant Molecular Biology 66, 599-608..
4. Albrecht V, Simkova K, Carrie C, Delannoy E, Giraud E, Whelan J, Small ID, Apel K, Badger MR, Pogson BJ. 2010. The cytoskeleton and the peroxisomal-targeted snowy cotyledon3 protein are required for chloroplast development in Arabidopsis. The Plant Cell 22, 3423-3438..
5. Aluru MR, Yu F, Fu A, Rodermel S. 2006. Arabidopsis variegation mutants: new insights into chloroplast biogenesis. Journal of Experimental Botany 57, 1871-1881..
6. Apuya NR, Yadegari R, Fischer RL, Harada JJ, Zimmerman JL, Goldberg RB. 2001. The Arabidopsis embryo mutant schlepperless has a defect in the chaperonin-60 alpha gene. Plant Physiology 126, 717-730..
7. Asakura Y, Hirohashi T, Kikuchi S, Belcher S, Osborne E, Yano S, Terashima I, Barkan A, Nakai M. 2004. Maize mutants lacking chloroplast FtsY exhibit pleiotropic defects in the biogenesis of thylakoid membranes. The Plant Cell 16, 201-214..
8. Baker MJ, Frazier AE, Gulbis JM, Ryan MT. 2007. Mitochondrial protein-import machinery: correlating structure with function. Trends in Cell Biology 17, 456-464..
9. Boudreau E, Nickelsen J, Lemaire SD, Ossenbuhl F, Rochaix JD. 2000. The Nac2 gene of Chlamydomonas encodes a chloroplast TPR-like protein involved in psbD mRNA stability. EMBO Journal 19, 3366-3376..
10. Brocard C, Hartig A. 2006. Peroxisome targeting signal 1: is it really a simple tripeptide? Biochimica et Biophysica Acta 1763, 1565-1573..
11. Carol P, Kuntz M. 2001. A plastid terminal oxidase comes to light: implications for carotenoid biosynthesis and chlororespiration. Trends in Plant Science 6, 31-36..
12. Charuvi D, Kiss V, Nevo R, Shimoni E, Adam Z, Reich Z. 2012. Gain and loss of photosynthetic membranes during plastid differentiation in the shoot apex of Arabidopsis. The Plant Cell 24, 1143-1157..
13. Chi W, Ma J, Zhang D, Guo J, Chen F, Lu C, Zhang L. 2008. The pentratricopeptide repeat protein DELAYED GREENING1 is involved in the regulation of early chloroplast development and chloroplast gene expression in Arabidopsis. Plant Physiology 147, 573-584..
14. Clough SJ, Bent AF. 1998. Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. The Plant Journal 16, 735-743..
15. Cui L. 2006. Chloroplast DB: the chloroplast genome database. Nucleic Acids Research 34, D692-D696..
16. D'Andrea LD, Regan L. 2003. TPR proteins: the versatile helix. Trends in Biochemical Science 28, 655-662..
17. Dyall SD. 2004. Ancient invasions: from endosymbionts to organelles. Science 304, 253-257..
18. Fransen M, Amery L, Hartig A, Brees C, Rabijns A, Mannaerts GP, Van Veldhoven PP. 2008. Comparison of the PTS1- and Rab8bbinding properties of Pex5p and Pex5Rp/TRIP8b. Biochimica et Biophysica Acta 1783, 864-873..
19. Han CD, Coe EH Jr, Martienssen RA. 1992. Molecular cloning and characterization of iojap (ij), a pattern striping gene of maize. EMBO Journal 11, 4037-4046..
20. Kakizaki T, Matsumura H, Nakayama K, Che FS, Terauchi R, Inaba T. 2009. Coordination of plastid protein import and nuclear gene expression by plastid-to-nucleus retrograde signaling. Plant Physiology 151, 1339-1353..
21. Kalanon M, McFadden GI. 2008. The chloroplast protein translocation complexes of Chlamydomonas reinhardtii: a bioinformatic comparison of Toc and Tic components in plants, green algae and red algae. Genetics 179, 95-112..
22. Kato Y, Miura E, Matsushima R, Sakamoto W. 2007. White leaf sectors in yellow variegated2 are formed by viable cells with undifferentiated plastids. Plant Physiology 144, 952-960..
23. Kim C, Lee KP, Baruah A, Nater M, Gobel C, Feussner I, Apel K. 2009. (1) O2-mediated retrograde signaling during late embryogenesis predetermines plastid differentiation in seedlings by recruiting abscisic acid. Proceedings of the National Academy of Sciences, USA 106, 9920-9924..
24. Kim J, Somers DE. 2010. Rapid assessment of gene function in the circadian clock using artificial microRNA in Arabidopsis mesophyll protoplasts. Plant Physiology 154, 611-621..
25. Kobayashi K, Kondo M, Fukuda H, Nishimura M, Ohta H. 2007. Galactolipid synthesis in chloroplast inner envelope is essential for proper thylakoid biogenesis, photosynthesis, and embryogenesis. Proceedings of the National Academy of Sciences, USA 104, 17216-17221..
26. Koch KE. 1996. Carbohydrate-modulated gene expression in plants. Annual Review of Plant Physiology and Plant Molecular Biology 47, 509-540..
27. Koncz C, Schell J. 1986. The promoter of TL-DNA gene 5 controls the tissue-specific expression of chimeric genes carried by a novel type of Agrobacterium binary vector. Molecular and General Genetics 204, 383-396..
28. Kosambi DD. 1943. The estimation of map distances from recombination values. Annals of Human Genetics 12, 172-175..
29. Larkin RM, Alonso JM, Ecker JR, Chory J. 2003. GUN4, a regulator of chlorophyll synthesis and intracellular signaling. Science 299, 902-906..
30. Leon P, Arroyo A, Mackenzie S. 1998. Nuclear control of plastid and mitochondrial development in higher plants. Annual Review of Plant Physiology and Plant Molecular Biology 49, 453-480..
31. Lichtenthaler HK, Wellburn AR. 1983. Determinations of total carotenoids and chlorophylls a and b of leaf extracts in different solvents. Biochemical Society Transactions 11, 591-592..
32. Liu X, Yu F, Rodermel S. 2010. Arabidopsis chloroplast FtsH, var2 and suppressors of var2 leaf variegation: a review. Journal of Integrative Plant Biology 52, 750-761..
33. Mansfield SG, Briarty LG. 1996. The dynamics of seedling and cotyledon cell development in Arabidopsis thaliana during reserve mobilization. International Journal of Plant Sciences 157, 280-295..
34. Michaels SD, Amasino RM. 1998. A robust method for detecting single-nucleotide changes as polymorphic markers by PCR. The Plant Journal 14, 381-385..
35. Mirus O, Bionda T, von Haeseler A, Schleiff E. 2009. Evolutionarily evolved discriminators in the 3-TPR domain of the Toc64 family involved in protein translocation at the outer membrane of chloroplasts and mitochondria. Journal of Molecular Modeling 15, 971-982..
36. Mochizuki N, Brusslan JA, Larkin R, Nagatani A, Chory J. 2001. Arabidopsis genomes uncoupled 5 (GUN5) mutant reveals the involvement of Mg-chelatase H subunit in plastid-to-nucleus signal transduction. Proceedings of the National Academy of Sciences, USA 98, 2053-2058..
37. Nott A, Jung HS, Koussevitzky S, Chory J. 2006. Plastid-tonucleus retrograde signaling. Annual Review of Plant Biology 57, 739-759..
38. Peng L, Ma J, Chi W, Guo J, Zhu S, Lu Q, Lu C, Zhang L. 2006. LOW PSII ACCUMULATION1 is involved in efficient assembly of photosystem II in Arabidopsis thaliana. The Plant Cell 18, 955-969..
39. Pfalz J, Liere K, Kandlbinder A, Dietz KJ, Oelmuller R. 2006. pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. The Plant Cell 18, 176-197..
40. Pogson BJ, Albrecht V. 2011. Genetic dissection of chloroplast biogenesis and development: an overview. Plant Physiology 155, 1545-1551..
41. Pyke K. 1997. The genetic control of plastid division in higher plants. American Journal of Botany 84, 1017..
42. Richly E, Leister D. 2004. An improved prediction of chloroplast proteins reveals diversities and commonalities in the chloroplast proteomes of Arabidopsis and rice. Gene 329, 11-16..
43. Robertson D, Laetsch WM. 1974. Structure and function of developing barley plastids. Plant Physiology 54, 148-159..
44. Sakamoto W, Uno Y, Zhang Q, Miura E, Kato Y, Sodmergen. 2009. Arrested differentiation of proplastids into chloroplasts in variegated leaves characterized by plastid ultrastructure and nucleoid morphology. Plant and Cell Physiology 50, 2069-2083..
45. Shimada H, Mochizuki M, Ogura K, Froehlich JE, Osteryoung KW, Shirano Y, Shibata D, Masuda S, Mori K, Takamiya K. 2007. Arabidopsis cotyledon-specific chloroplast biogenesis factor CYO1 is a protein disulfide isomerase. The Plant Cell 19, 3157-3169..
46. Small ID, Peeters N. 2000. The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends in Biochemical Science 25, 46-47..
47. Sohrt K, Soll J. 2000. Toc64, a new component of the protein translocon of chloroplasts. Journal of Cell Biology 148, 1213-1222..
48. Staehelin LA, Newcomb EH. 2000. Membrane structure and membranous organelles. In: Buchanan RB, Gruissem W, Jones RL, eds. Biochemistry and molecular biology of plants . Rockville, MD: American Society of Plant Biology, 2-50..
49. Stockel J, Bennewitz S, Hein P, Oelmuller R. 2006. The evolutionarily conserved tetratrico peptide repeat protein pale yellow green7 is required for photosystem I accumulation in Arabidopsis and copurifies with the complex. Plant Physiology 141, 870-878..
50. Su N, Hu ML, Wu DX, et al. 2012. Disruption of a rice pentatricopeptide repeat protein causes a seedling-specific albino phenotype and its utilization to enhance seed purity in hybrid rice production. Plant Physiology 159, 227-238..
51. Surpin M, Larkin RM, Chory J. 2002. Signal transduction between the chloroplast and the nucleus. The Plant Cell 14 Suppl, S327-S338..
52. Susek RE, Ausubel FM, Chory J. 1993. Signal transduction mutants of Arabidopsis uncouple nuclear CAB and RBCS gene expression from chloroplast development. Cell 74, 787-799..
53. Uwer U, Willmitzer L, Altmann T. 1998. Inactivation of a glycyltRNA synthetase leads to an arrest in plant embryo development. The Plant Cell 10, 1277-1294..
54. Whitfield C, Mainprize IL. 2010. TPR motifs: hallmarks of a new polysaccharide export scaffold. Structure 18, 151-153..
55. Woodson JD, Perez-Ruiz JM, Chory J. 2011. Heme synthesis by plastid ferrochelatase I regulates nuclear gene expression in plants. Current Biology 21, 897-903..
56. Young JC, Barral JM, Ulrich Hartl F. 2003. More than folding: localized functions of cytosolic chaperones. Trends in Biochemical Science 28, 541-547..
57. Yu QB, Jiang Y, Chong K, Yang ZN. 2009. AtECB2, a pentatricopeptide repeat protein, is required for chloroplast transcript accD RNA editing and early chloroplast biogenesis in Arabidopsis thaliana. The Plant Journal 59, 1011-1023..