Meta-regression analysis of commensal and pathogenic Escherichia coli survival in soil and water

Environmental Science and Technology

Volumn 48, Issue 12, 2014, Pages 6763-6771

  Franz, Eelco ^a   Schijven, Jack ^a,c   De Roda Husman, Ana Maria ^a,b   Blaak, Hetty ^a  

^a NATIONAL INSTITUTE FOR PUBLIC HEALTH AND THE ENVIRONMENT   (Netherlands)

^b UTRECHT UNIVERSITY   (Netherlands)

^c UTRECHT UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

ESCHERICHIA COLI; REGRESSION ANALYSIS;

EXPERIMENTAL CONDITIONS; GLOBAL EFFECTS; LITERATURE DATA; META-ANALYSIS; PATHOGENIC ESCHERICHIA COLI; REGRESSION MODEL; SOIL AND WATER; SOURCES OF VARIABILITY;

SOILS;

DRINKING WATER; FRESH WATER; GROUND WATER; PEAT; WATER;

COMMENSAL; META-ANALYSIS; MICROBIAL ACTIVITY; PATHOGEN; REGRESSION ANALYSIS; SURVIVORSHIP;

ARTICLE; BACTERIAL SURVIVAL; CLAY; COMMENSAL ESCHERICHIA COLI; ENTEROPATHOGENIC ESCHERICHIA COLI; LABORATORY; LOAM SOIL; META REGRESSION ANALYSIS; MULTIVARIATE ANALYSIS; PH; QUANTITATIVE ANALYSIS; REGRESSION ANALYSIS; RHIZOSPHERE; SAND; SOIL; TEMPERATURE; VEGETATION; WASTE WATER;

ESCHERICHIA COLI; HYDROGEN-ION CONCENTRATION; MICROBIAL VIABILITY; REGRESSION ANALYSIS; SOIL MICROBIOLOGY; TEMPERATURE; WATER MICROBIOLOGY;

EID: 84902590265     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es501677c     Document Type: Article

References (34)

1. Wang, G.; Doyle, M. P. Survival of enterohemmorhagic Escherichia coli O157:H7 in water J. Food Protect. 1998, 61 (6) 662-667
2. Brandl, M. T., Fitness of human enteric pathogens on plants and implications for food safety. In Annual Review of Phytopathology, 2006; Vol. 44, pp 367-392.
3. Franz, E.; Van Bruggen, A. H. C. Ecology of E. coli O157:H7 and Salmonella enterica in the primary vegetable production chain Crit. Rev. Microbiol. 2008, 34 (3-4) 143-161
4. Holden, N.; Pritchard, L.; Toth, I. Colonization outwith the colon: Plants as an alternative environmental reservoir for human pathogenic enterobacteria: Review article FEMS Microbiol. Rev. 2009, 33 (4) 689-703
5. Van Elsas, J. D.; Semenov, A. V.; Costa, R.; Trevors, J. T. Survival of Escherichia coli in the environment: Fundamental and public health aspects ISME J. 2011, 5 (2) 173-183
6. Francis, G. A.; Thomas, C.; O'Beirne, D. The microbiological safety of minimally processed vegetables Int. J. Food Sci. Technol. 1999, 34 (1) 1-22
7. Lynch, M. F.; Tauxe, R. V.; Hedberg, C. W. The growing burden of foodborne outbreaks due to contaminated fresh produce: Risks and opportunities Epidemiol. Infect. 2009, 137 (3) 307-315
8. Ruimy, R.; Brisabois, A.; Bernede, C.; Skurnik, D.; Barnat, S.; Arlet, G.; Momcilovic, S.; Elbaz, S.; Moury, F.; Vibet, M. A.; Courvalin, P.; Guillemot, D.; Andremont, A. Organic and conventional fruits and vegetables contain equivalent counts of Gram-negative bacteria expressing resistance to antibacterial agents Environ. Microbiol. 2010, 12 (3) 608-615
9. Raphael, E.; Wong, L. K.; Riley, L. W. Extended-spectrum beta-lactamase gene sequences in Gram-negative saprophytes on retail organic and nonorganic spinach Appl. Environ. Microbiol. 2011, 77 (5) 1601-1607
10. EPA. Microbial Risk Assessment Guideline: Pathogenic Microorganisms with Focus on Food and Water, 2012.
11. WHO. Exposure assessment of Microbiological Hazards in Food, 2008.
12. Franz, E.; Semenov, A. V.; Termorshuizen, A. J.; de Vos, O. J.; Bokhorst, J. G.; van Bruggen, A. H. C. Manure-amended soil characteristics affecting the survival of E. coli O157:H7 in 36 Dutch soils Environ. Microbiol. 2008, 10 (2) 313-327
13. Franz, E.; van Hoek, A. H. A. M.; Bouw, E.; Aarts, H. J. M. Variability of Escherichia coli O157 strain survival in manure-amended soil in relation to strain origin, virulence profile, and carbon nutrition profile Appl. Environ. Microbiol. 2011, 77 (22) 8088-8096
14. Van Veen, J. A.; Van Overbeek, L. S.; Van Elsas, J. D. Fate and activity of microorganisms introduced into soil Microbiol. Mol. Biol. Rev. 1997, 61 (2) 121-135
15. Bucci, V.; Vulić, M.; Ruan, X.; Hellweger, F. L. Population dynamics of Escherichia coli in surface water J. Am. Water Resour. Assoc. 2011, 47 (3) 611-619
16. Franz, E.; van Bruggen, A. H. C., Ecology of E. coli O157:H7 and Salmonella entercia in the primary vegetable production chain. Cri. Rev. Microbiol. 2008, 34 (143-161).
17. Fremaux, B.; Prigent-Combaret, C.; Vernozy-Rozand, C. Long-term survival of Shiga toxin-producing Escherichia coli in cattle effluents and environment: An updated review Vet. Microbiol. 2008, 132 (1-2) 1-18
18. Durso, L. M.; Smith, D.; Hutkins, R. W. Measurements of fitness and competition in commensal Escherichia coli and E. coli O157:H7 strains Appl. Environ. Microbiol. 2004, 70 (11) 6466-6472
19. Méric, G.; Kemsley, E. K.; Falush, D.; Saggers, E. J.; Lucchini, S. Phylogenetic distribution of traits associated with plant colonization in Escherichia coli Environmental Microbiology 2013, 15 (2) 487-501
20. Gordon, D. M. The ecology of Escherichia coli. In Escherichia coli Pathotypes and Principles of Pathogenesis; Donnenberg, M. S., Ed.; Elsevier, 2013.
21. van Hoek, A. H.; Aarts, H. J.; Bouw, E.; van Overbeek, W. M.; Franz, E. The role of rpoS in Escherichia coli O157 manure-amended soil survival and distribution of allelic variations among bovine, food and clinical isolates FEMS Microbiol. Lett. 2013, 338 (1) 18-23
22. Fenlon, D. R.; Ogden, I. D.; Vinten, A.; Svoboda, I. The fate of Escherichia coli and E. coli O157 in cattle slurry after application to land J. Appl. Microbiol. Symp. Suppl. 2000, 88 (29) 149s-156s
23. Mubiru, D. N.; Coyne, M. S.; Grove, J. H. Mortality of Escherichia coli O157:H7 in two soils with different physical and chemical properties J. Environ. Qual. 2000, 29 (6) 1821-1825
24. Nicholson, F. A.; Groves, S. J.; Chambers, B. J. Pathogen survival during livestock manure storage and following land application Bioresour. Technol. 2005, 96 (2) 135-143
25. LeJeune, J. T.; Besser, T. E.; Hancock, D. D. Cattle water troughs as reservoirs of Escherichia coli O157 Appl. Environ. Microbiol. 2001, 67 (7) 3053-3057
26. Artz, R. R. E.; Killham, K. Survival of Escherichia coli O157:H7 in private drinking water wells: Influences of protozoan grazing and elevated copper concentrations FEMS Microbiol. Lett. 2002, 216 (1) 117-122
27. Ongeng, D.; Muyanja, C.; Geeraerd, A. H.; Springael, D.; Ryckeboer, J. Survival of Escherichia coli O157:H7 and Salmonella enterica serovar Typhimurium in manure and manure-amended soil under tropical climatic conditions in Sub-Saharan Africa J. Appl. Microbiol. 2011, 110 (4) 1007-1022
28. Seo, S.; Matthews, K. R. Exposure of Escherichia coli O157: H7 to soil, manure, or water influences its survival on plants and initiation of plant defense response Food Microbiol. 2014, 38, 87-92
29. Jiang, X.; Morgan, J.; Doyle, M. P. Fate of Escherichia coli O157:H7 in manure-amended soil Appl. Environ. Microbiol. 2002, 68 (5) 2605-2609
30. Unc, A.; Goss, M. J. Culturable Escherichia coli in soil mixed with two types of manure Soil Sci. Soc. Am. J. 2006, 70 (3) 763-769
31. Semenov, A. V.; Van Bruggen, A. H. C.; Van Overbeek, L.; Termorshuizen, A. J.; Semenov, A. M. Influence of temperature fluctuations on Escherichia coli O157:H7 and Salmonella enterica serovar Typhimurium in cow manure FEMS Microbiol. Ecol. 2007, 60 (3) 419-428
32. Van Elsas, J. D.; Hill, P.; Chroňková, A.; Grekova, M.; Topalova, Y.; Elhottová, D.; Krištufek, V. Survival of genetically marked Escherichia coli O157:H7 in soil as affected by soil microbial community shifts ISME J. 2007, 1 (3) 204-214
33. Johnson, D. H. The insignificance of statistical significance testing J. Wildlife Manage. 1999, 63 (3) 763-772
34. Mazerolle, M. J. Improving data analysis in herpetology: Using Akaike's information criterion (AIC) to assess the strength of biological hypotheses Amphibia Reptilia 2006, 27 (2) 169-180