-
1
-
-
36149000117
-
Characterization, polymorphism, and evolution of MHC class IIB genes in birds of prey
-
Alcaide M, Edwards SV, Negro JJ (2007) Characterization, polymorphism, and evolution of MHC class IIB genes in birds of prey. Journal of Molecular Evolution, 65, 541-554.
-
(2007)
Journal of Molecular Evolution
, vol.65
, pp. 541-554
-
-
Alcaide, M.1
Edwards, S.V.2
Negro, J.J.3
-
2
-
-
84885109490
-
Major histocompatibility complex class I evolution in songbirds: universal primers, rapid evolution and base compositional shifts in exon 3
-
Alcaide M, Liu M, Edwards SV (2013) Major histocompatibility complex class I evolution in songbirds: universal primers, rapid evolution and base compositional shifts in exon 3. PeerJ, 1, e86.
-
(2013)
PeerJ
, vol.1
-
-
Alcaide, M.1
Liu, M.2
Edwards, S.V.3
-
3
-
-
77954057688
-
Ancestral polymorphism in exon 2 of bluethroat (Luscinia svecica) MHC class II B genes
-
Anmarkrud JA, Johnsen A, Bachmann L, Lifjeld JT (2010) Ancestral polymorphism in exon 2 of bluethroat (Luscinia svecica) MHC class II B genes. Journal of Evolutionary Biology, 23, 1206-1217.
-
(2010)
Journal of Evolutionary Biology
, vol.23
, pp. 1206-1217
-
-
Anmarkrud, J.A.1
Johnsen, A.2
Bachmann, L.3
Lifjeld, J.T.4
-
4
-
-
77949340359
-
Methods for MHC genotyping in non-model vertebrates
-
Babik W (2010) Methods for MHC genotyping in non-model vertebrates. Molecular Ecology Resources, 10, 237-251.
-
(2010)
Molecular Ecology Resources
, vol.10
, pp. 237-251
-
-
Babik, W.1
-
5
-
-
48149112298
-
Isolation and characterization of major histocompatibility complex (MHC) class II B genes in the Barn owl (Aves: Tyto alba)
-
Burri R, Niculita-Hirzel H, Roulin A, Fumagalli L (2008a) Isolation and characterization of major histocompatibility complex (MHC) class II B genes in the Barn owl (Aves: Tyto alba). Immunogenetics, 60, 543-550.
-
(2008)
Immunogenetics
, vol.60
, pp. 543-550
-
-
Burri, R.1
Niculita-Hirzel, H.2
Roulin, A.3
Fumagalli, L.4
-
6
-
-
44649104548
-
Evolutionary patterns of MHC class II B in owls and their implications for the understanding of avian MHC evolution
-
Burri R, Niculita-Hirzel H, Salamin N, Roulin A, Fumagalli L (2008b) Evolutionary patterns of MHC class II B in owls and their implications for the understanding of avian MHC evolution. Molecular Biology and Evolution, 25, 1180-1191.
-
(2008)
Molecular Biology and Evolution
, vol.25
, pp. 1180-1191
-
-
Burri, R.1
Niculita-Hirzel, H.2
Salamin, N.3
Roulin, A.4
Fumagalli, L.5
-
7
-
-
77957224454
-
Adaptive divergence of ancient gene duplicates in the avian MHC class II B
-
Burri R, Salamin N, Studer RA, Roulin A, Fumagalli L (2010) Adaptive divergence of ancient gene duplicates in the avian MHC class II B. Molecular Biology and Evolution, 27, 2360-2374.
-
(2010)
Molecular Biology and Evolution
, vol.27
, pp. 2360-2374
-
-
Burri, R.1
Salamin, N.2
Studer, R.A.3
Roulin, A.4
Fumagalli, L.5
-
8
-
-
77957033334
-
Towards the simplification of MHC typing protocols: targeting classical MHC class II genes in a passerine, the pied flycatcher Ficedula hypoleuca
-
Canal D, Alcaide M, Anmarkrud J, Potti J (2010) Towards the simplification of MHC typing protocols: targeting classical MHC class II genes in a passerine, the pied flycatcher Ficedula hypoleuca. BMC Research Notes, 3, 236.
-
(2010)
BMC Research Notes
, vol.3
, pp. 236
-
-
Canal, D.1
Alcaide, M.2
Anmarkrud, J.3
Potti, J.4
-
9
-
-
0029583058
-
Dynamics of Mhc evolution in birds and crocodilians: amplification of class II genes with degenerate primers
-
Edwards SV, Grahn M, Potts WK (1995) Dynamics of Mhc evolution in birds and crocodilians: amplification of class II genes with degenerate primers. Molecular Ecology, 4, 719-729.
-
(1995)
Molecular Ecology
, vol.4
, pp. 719-729
-
-
Edwards, S.V.1
Grahn, M.2
Potts, W.K.3
-
10
-
-
0033851037
-
A 39-kb sequence around a blackbird Mhc class II gene: ghost of selection past and songbird genome architecture
-
Edwards SV, Gasper J, Garrigan D, Martindale D, Koop BF (2000) A 39-kb sequence around a blackbird Mhc class II gene: ghost of selection past and songbird genome architecture. Molecular Biology and Evolution, 17, 1384-1395.
-
(2000)
Molecular Biology and Evolution
, vol.17
, pp. 1384-1395
-
-
Edwards, S.V.1
Gasper, J.2
Garrigan, D.3
Martindale, D.4
Koop, B.F.5
-
11
-
-
0037272125
-
Patterns of polymorphism in the MHC class II of a non-passerine bird, the great snipe (Gallinago media)
-
Ekblom R, Grahn M, Hoglund J (2003) Patterns of polymorphism in the MHC class II of a non-passerine bird, the great snipe (Gallinago media). Immunogenetics, 54, 734-741.
-
(2003)
Immunogenetics
, vol.54
, pp. 734-741
-
-
Ekblom, R.1
Grahn, M.2
Hoglund, J.3
-
12
-
-
46449135061
-
A phylogenomic study of birds reveals their evolutionary history
-
Hackett SJ, Kimball RT, Reddy S et al. (2008) A phylogenomic study of birds reveals their evolutionary history. Science, 320, 1763-1768.
-
(2008)
Science
, vol.320
, pp. 1763-1768
-
-
Hackett, S.J.1
Kimball, R.T.2
Reddy, S.3
-
13
-
-
0036241218
-
The evolution of the major histocompatibility complex in birds
-
Hess CM, Edwards SV (2002) The evolution of the major histocompatibility complex in birds. BioScience, 52, 423-431.
-
(2002)
BioScience
, vol.52
, pp. 423-431
-
-
Hess, C.M.1
Edwards, S.V.2
-
14
-
-
43049126454
-
Support for the minimal essential MHC hypothesis: a parrot with a single, highly polymorphic MHC class II B gene
-
Hughes CR, Miles S, Walbroehl JM (2008) Support for the minimal essential MHC hypothesis: a parrot with a single, highly polymorphic MHC class II B gene. Immunogenetics, 60, 219-231.
-
(2008)
Immunogenetics
, vol.60
, pp. 219-231
-
-
Hughes, C.R.1
Miles, S.2
Walbroehl, J.M.3
-
15
-
-
0344629203
-
Bias and artifacts in multitemplate polymerase chain reactions (PCR)
-
Kanagawa T (2003) Bias and artifacts in multitemplate polymerase chain reactions (PCR). Journal of Bioscience and Bioengineering, 96, 317-323.
-
(2003)
Journal of Bioscience and Bioengineering
, vol.96
, pp. 317-323
-
-
Kanagawa, T.1
-
16
-
-
84875619226
-
MAFFT multiple sequence alignment software version 7: improvements in performance and usability
-
Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution, 30, 772-780.
-
(2013)
Molecular Biology and Evolution
, vol.30
, pp. 772-780
-
-
Katoh, K.1
Standley, D.M.2
-
17
-
-
0027450353
-
The molecular descent of the major histocompatibility complex
-
Klein J, Satta Y, O'hUigin C, Takahata N (1993) The molecular descent of the major histocompatibility complex. Annual Review of Immunology, 11, 269-295.
-
(1993)
Annual Review of Immunology
, vol.11
, pp. 269-295
-
-
Klein, J.1
Satta, Y.2
O'hUigin, C.3
Takahata, N.4
-
18
-
-
55149119144
-
Simple approach to reduce PCR artefact formation leads to reliable genotyping of MHC and other highly polymorphic loci - Implications for evolutionary analysis
-
Lenz TL, Becker S (2008) Simple approach to reduce PCR artefact formation leads to reliable genotyping of MHC and other highly polymorphic loci - Implications for evolutionary analysis. Gene, 427, 117-123.
-
(2008)
Gene
, vol.427
, pp. 117-123
-
-
Lenz, T.L.1
Becker, S.2
-
19
-
-
79953831303
-
Characterisation of class II B MHC genes from a ratite bird, the little spotted kiwi (Apteryx owenii)
-
Miller H, Bowker-Wright G, Kharkrang M, Ramstad K (2011) Characterisation of class II B MHC genes from a ratite bird, the little spotted kiwi (Apteryx owenii). Immunogenetics, 63, 223-233.
-
(2011)
Immunogenetics
, vol.63
, pp. 223-233
-
-
Miller, H.1
Bowker-Wright, G.2
Kharkrang, M.3
Ramstad, K.4
-
20
-
-
0002973323
-
Balanced polymorphism and evolution by the birth-and-death process in the MHC loci
-
11th Histocompatibility Workshop and Conference (eds Tsuji K, Aizawa M & Sasazuki T) Oxford University Press, Oxford.
-
Nei M, Hughes AL (1992) Balanced polymorphism and evolution by the birth-and-death process in the MHC loci. In: 11th Histocompatibility Workshop and Conference (eds Tsuji K, Aizawa M & Sasazuki T), pp. 27-38. Oxford University Press, Oxford.
-
(1992)
, pp. 27-38
-
-
Nei, M.1
Hughes, A.L.2
-
21
-
-
27944477670
-
Concerted and birth-and-death evolution of multigene families
-
Nei M, Rooney AP (2005) Concerted and birth-and-death evolution of multigene families. Annual Review of Genetics, 39, 121-152.
-
(2005)
Annual Review of Genetics
, vol.39
, pp. 121-152
-
-
Nei, M.1
Rooney, A.P.2
-
22
-
-
33644998297
-
The evolutionary ecology of the major histocompatibility complex
-
Piertney SB, Oliver MK (2006) The evolutionary ecology of the major histocompatibility complex. Heredity, 96, 7-21.
-
(2006)
Heredity
, vol.96
, pp. 7-21
-
-
Piertney, S.B.1
Oliver, M.K.2
-
23
-
-
84856736609
-
Evaluation of two approaches to genotyping major histocompatibility complex class I in a passerine-CE-SSCP and 454 pyrosequencing
-
Promerová M, Babik W, Bryja J, Albrecht T, Stuglik M, Radwan J (2012) Evaluation of two approaches to genotyping major histocompatibility complex class I in a passerine-CE-SSCP and 454 pyrosequencing. Molecular Ecology Resources, 12, 285-292.
-
(2012)
Molecular Ecology Resources
, vol.12
, pp. 285-292
-
-
Promerová, M.1
Babik, W.2
Bryja, J.3
Albrecht, T.4
Stuglik, M.5
Radwan, J.6
-
24
-
-
84880761025
-
MHC class IIB exon 2 polymorphism in the grey partridge (Perdix perdix) is shaped by selection, recombination and gene conversion
-
Promerová M, Králová T, Bryjová A, Albrecht T, Bryja J (2013) MHC class IIB exon 2 polymorphism in the grey partridge (Perdix perdix) is shaped by selection, recombination and gene conversion. PLoS One, 8, e69135.
-
(2013)
PLoS One
, vol.8
-
-
Promerová, M.1
Králová, T.2
Bryjová, A.3
Albrecht, T.4
Bryja, J.5
-
25
-
-
79957440960
-
Spectrum of MHC class II variability in Darwin's finches and their close relatives
-
Sato A, Tichy H, Grant PR, Grant BR, Sato T, O'hUigin C (2011) Spectrum of MHC class II variability in Darwin's finches and their close relatives. Molecular Biology and Evolution, 28, 1943-1956.
-
(2011)
Molecular Biology and Evolution
, vol.28
, pp. 1943-1956
-
-
Sato, A.1
Tichy, H.2
Grant, P.R.3
Grant, B.R.4
Sato, T.5
O'hUigin, C.6
-
26
-
-
27744606052
-
The importance of immune gene variability (MHC) in evolutionary ecology and conservation
-
Sommer S (2005) The importance of immune gene variability (MHC) in evolutionary ecology and conservation. Frontiers in Zoology, 2, 1-18.
-
(2005)
Frontiers in Zoology
, vol.2
, pp. 1-18
-
-
Sommer, S.1
-
27
-
-
84876675587
-
Evolutionary history of black grouse major histocompatibility complex class IIB genes revealed through single locus sequence-based genotyping
-
Strand T, Wang B, Meyer-Lucht Y, Hoglund J (2013) Evolutionary history of black grouse major histocompatibility complex class IIB genes revealed through single locus sequence-based genotyping. BMC Genetics, 14, 29.
-
(2013)
BMC Genetics
, vol.14
, pp. 29
-
-
Strand, T.1
Wang, B.2
Meyer-Lucht, Y.3
Hoglund, J.4
-
28
-
-
80155164025
-
Characterization of MHC class I and II genes in a subantarctic seabird, the blue petrel, Halobaena caerulea (Procellariiformes)
-
Strandh M, Lannefors M, Bonadonna F, Westerdahl H (2011) Characterization of MHC class I and II genes in a subantarctic seabird, the blue petrel, Halobaena caerulea (Procellariiformes). Immunogenetics, 63, 653-666.
-
(2011)
Immunogenetics
, vol.63
, pp. 653-666
-
-
Strandh, M.1
Lannefors, M.2
Bonadonna, F.3
Westerdahl, H.4
-
29
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28, 2731-2739.
-
(2011)
Molecular Biology and Evolution
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
30
-
-
12044254346
-
Surveys of gene families using polymerase chain reaction: PCR selection and PCR drift
-
Wagner A, Blackstone N, Cartwright P et al. (1994) Surveys of gene families using polymerase chain reaction: PCR selection and PCR drift. Systematic Biology, 43, 250-261.
-
(1994)
Systematic Biology
, vol.43
, pp. 250-261
-
-
Wagner, A.1
Blackstone, N.2
Cartwright, P.3
-
31
-
-
65449188232
-
Jalview Version 2-a multiple sequence alignment editor and analysis workbench
-
Waterhouse AM, Procter JB, Martin DMA, Clamp M, Barton GJ (2009) Jalview Version 2-a multiple sequence alignment editor and analysis workbench. Bioinformatics, 25, 1189-1191.
-
(2009)
Bioinformatics
, vol.25
, pp. 1189-1191
-
-
Waterhouse, A.M.1
Procter, J.B.2
Martin, D.M.A.3
Clamp, M.4
Barton, G.J.5
-
32
-
-
43049145493
-
Single locus typing of MHC class I and class II B loci in a population of red jungle fowl
-
Worley K, Gillingham M, Jensen P et al. (2008) Single locus typing of MHC class I and class II B loci in a population of red jungle fowl. Immunogenetics, 60, 233-247.
-
(2008)
Immunogenetics
, vol.60
, pp. 233-247
-
-
Worley, K.1
Gillingham, M.2
Jensen, P.3
-
33
-
-
78650653530
-
454 sequencing reveals extreme complexity of the class II Major Histocompatibility Complex in the collared flycatcher
-
Zagalska-Neubauer M, Babik W, Stuglik M, Gustafsson L, Cichoń M, Radwan J (2010) 454 sequencing reveals extreme complexity of the class II Major Histocompatibility Complex in the collared flycatcher. BMC Evolutionary Biology, 10, 1-15.
-
(2010)
BMC Evolutionary Biology
, vol.10
, pp. 1-15
-
-
Zagalska-Neubauer, M.1
Babik, W.2
Stuglik, M.3
Gustafsson, L.4
Cichoń, M.5
Radwan, J.6
|