메뉴 건너뛰기




Volumn 187, Issue 1, 2014, Pages 84-92

Spherical deconvolution improves quality of single particle reconstruction

Author keywords

GroEL; Incorrect angular assignment; Mitochondrial ribosome; Single particle reconstruction; Spherical deconvolution

Indexed keywords

ALGORITHM; ARTICLE; BIOTECHNOLOGICAL PROCEDURES; CRYSTALLOGRAPHY; DENSITY GRADIENT; FOURIER TRANSFORMATION; MITOCHONDRION; MODULATION TRANSFER FUNCTION; MOLECULAR DOCKING; MOLECULAR MODEL; OSCILLATION; PRIORITY JOURNAL; PROTEIN DENATURATION; R FACTOR; RIBOSOME; RNA ANALYSIS; SINGLE PARTICLE RECONSTRUCTION; TEMPERATURE; CHEMICAL STRUCTURE; CHEMISTRY; CRYOELECTRON MICROSCOPY; IMAGE PROCESSING; STATISTICS AND NUMERICAL DATA; THREE DIMENSIONAL IMAGING; ULTRASTRUCTURE;

EID: 84902136250     PISSN: 10478477     EISSN: 10958657     Source Type: Journal    
DOI: 10.1016/j.jsb.2014.05.002     Document Type: Article
Times cited : (7)

References (21)
  • 1
    • 2242431668 scopus 로고    scopus 로고
    • Crystal structure of Escherichia coli MscS, a voltage-modulated and mechanosensitive channel
    • Bass R.B., Strop P., Barclay M., Rees D.C. Crystal structure of Escherichia coli MscS, a voltage-modulated and mechanosensitive channel. Science 2002, 298:1582-1587.
    • (2002) Science , vol.298 , pp. 1582-1587
    • Bass, R.B.1    Strop, P.2    Barclay, M.3    Rees, D.C.4
  • 3
    • 0000273884 scopus 로고
    • Computing Fourier transforms and convolutions on the 2-sphere
    • Driscoll J.R., Healy D.M. Computing Fourier transforms and convolutions on the 2-sphere. Adv. Appl. Math. 1994, 15:202-250.
    • (1994) Adv. Appl. Math. , vol.15 , pp. 202-250
    • Driscoll, J.R.1    Healy, D.M.2
  • 4
    • 51549084591 scopus 로고    scopus 로고
    • Sharpening high resolution information in single particle electron microscopy
    • Fernandez J.J., Luque D., Caston J.R., Carrascosa J.L. Sharpening high resolution information in single particle electron microscopy. J. Struct. Biol. 2008, 164:170-175.
    • (2008) J. Struct. Biol. , vol.164 , pp. 170-175
    • Fernandez, J.J.1    Luque, D.2    Caston, J.R.3    Carrascosa, J.L.4
  • 6
    • 0013292362 scopus 로고
    • Solar oscillation ring diagrams: benefits of great circle remapping. Helio- and Astero-Seismology
    • Haber D., Toomre J., Hill F., Gough D. Solar oscillation ring diagrams: benefits of great circle remapping. Helio- and Astero-Seismology. ASP Conf. Ser. 1995, 76:272-275.
    • (1995) ASP Conf. Ser. , vol.76 , pp. 272-275
    • Haber, D.1    Toomre, J.2    Hill, F.3    Gough, D.4
  • 7
    • 84902138701 scopus 로고    scopus 로고
    • Subphotospheric structure and dynamics deduced from ring analysis
    • Haber, D.A., 2004. Subphotospheric structure and dynamics deduced from ring analysis. Proc. SOHO. 14, 676-687.
    • (2004) Proc. SOHO , vol.14 , pp. 676-687
    • Haber, D.A.1
  • 9
    • 41849124559 scopus 로고    scopus 로고
    • Spherical harmonics-based parametric deconvolution of 3D surface images using bending energy minimization
    • Khairy K., Howard J. Spherical harmonics-based parametric deconvolution of 3D surface images using bending energy minimization. Med. Image Anal. 2008, 212(2):217-227.
    • (2008) Med. Image Anal. , vol.212 , Issue.2 , pp. 217-227
    • Khairy, K.1    Howard, J.2
  • 12
    • 40049105503 scopus 로고    scopus 로고
    • De novo backbone trace of GroEL from single particle electron cryomicroscopy
    • Ludtke S.J., Baker M.L., Chen D.H., Song J.L., Chuang D.T., Chiu W. De novo backbone trace of GroEL from single particle electron cryomicroscopy. Structure 2008, 16:441-448.
    • (2008) Structure , vol.16 , pp. 441-448
    • Ludtke, S.J.1    Baker, M.L.2    Chen, D.H.3    Song, J.L.4    Chuang, D.T.5    Chiu, W.6
  • 14
    • 0002529738 scopus 로고
    • Fourier series on spheres
    • Orszag S.A. Fourier series on spheres. Mon. Weather Rev. 1974, 102:56-75.
    • (1974) Mon. Weather Rev. , vol.102 , pp. 56-75
    • Orszag, S.A.1
  • 15
    • 76949087187 scopus 로고    scopus 로고
    • Deblurring of class-averaged images in single-particle electron microscopy
    • Park W., Madden D., Rockmore D.N., Chirikjian G.S. Deblurring of class-averaged images in single-particle electron microscopy. Inverse Probl. 2010, 26(3):3500521-35005229.
    • (2010) Inverse Probl. , vol.26 , Issue.3 , pp. 3500521-35005229
    • Park, W.1    Madden, D.2    Rockmore, D.N.3    Chirikjian, G.S.4
  • 16
    • 84902156451 scopus 로고
    • Scale-factor adjustment for optimum comparison of observed and calculated structure factors
    • Segerman E. Scale-factor adjustment for optimum comparison of observed and calculated structure factors. Acta Crystallogr. 1958, 11:374-375.
    • (1958) Acta Crystallogr. , vol.11 , pp. 374-375
    • Segerman, E.1
  • 17
    • 0033279023 scopus 로고    scopus 로고
    • Efficient spectral-galerkin methods iv. Spherical Geometries
    • Shen J. Efficient spectral-galerkin methods iv. Spherical Geometries. Siam. J. Sci. Comput. 1999, 20(4):1438-1455.
    • (1999) Siam. J. Sci. Comput. , vol.20 , Issue.4 , pp. 1438-1455
    • Shen, J.1
  • 18
    • 0142042865 scopus 로고    scopus 로고
    • Optimal determination of particle orientation, absolute hand and contrast loss in single particle electron cryomicroscopy
    • Rosenthal P.B., Henderson R. Optimal determination of particle orientation, absolute hand and contrast loss in single particle electron cryomicroscopy. J. Mol. Biol. 2003, 333:721-745.
    • (2003) J. Mol. Biol. , vol.333 , pp. 721-745
    • Rosenthal, P.B.1    Henderson, R.2
  • 19
    • 0035192552 scopus 로고    scopus 로고
    • Fibre diffraction studies of filamentous viruses
    • Stubbs G. Fibre diffraction studies of filamentous viruses. Rep. Prog. Phys. 2001, 64:1389-1425.
    • (2001) Rep. Prog. Phys. , vol.64 , pp. 1389-1425
    • Stubbs, G.1
  • 20
    • 4244031160 scopus 로고
    • Deconvolution of disoriented fiber diffraction data using iterative convolution and local regression
    • Tibbitts T., Caspar D. Deconvolution of disoriented fiber diffraction data using iterative convolution and local regression. Acta Crystallogr. A. 1993, 49(3):532-545.
    • (1993) Acta Crystallogr. A. , vol.49 , Issue.3 , pp. 532-545
    • Tibbitts, T.1    Caspar, D.2
  • 21
    • 58149467518 scopus 로고    scopus 로고
    • Comparison of geometrical mapping for ring diagram analysis
    • i.d. 012090
    • Zaatri A., Corbard T., Roth M., Hernandez I.G., Luhe O. Comparison of geometrical mapping for ring diagram analysis. J. Phys. Conf. Ser. 2008, 118(1):34. i.d. 012090.
    • (2008) J. Phys. Conf. Ser. , vol.118 , Issue.1 , pp. 34
    • Zaatri, A.1    Corbard, T.2    Roth, M.3    Hernandez, I.G.4    Luhe, O.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.