A first assessment of genetic variability in the Eurasian Stone-curlew Burhinus oedicnemus

Ibis

Volumn 156, Issue 3, 2014, Pages 687-692

  Mori, Alessia ^a,b   Baldaccini, Natale E ^a   Baratti, Mariella ^b   Caccamo, Chiara ^a   Dessì Fulgheri, Francesco ^c   Grasso, Rosario ^d   Nouira, Said ^e   Ouni, Ridha ^e   Pollonara, Enrica ^a   Rodriguez Godoy, Felipe ^f   Spena, Maria T ^d   Giunchi, Dimitri ^a  

^a UNIVERSITY OF PISA   (Italy)

^b CNR Istituto per Lo Studio Degli Ecosistemi   (Italy)

^c UNIVERSITY OF FLORENCE   (Italy)

^d UNIVERSITY OF CATANIA   (Italy)

^e University Tunis El Manar   (Tunisia)

^f Instituto Canario de Ciencias Marinas   (Spain)

Author keywords

Avian subspecies; Microsatellite; NADH2; Shorebirds

Indexed keywords

CONSERVATION MANAGEMENT; CONSERVATION PLANNING; GENETIC MARKER; GENETIC VARIATION; GEOGRAPHICAL DISTRIBUTION; GEOGRAPHICAL REGION; POPULATION STRUCTURE; SUBSPECIES; TAXONOMY; WADER;

CANARY ISLANDS; SPAIN;

EID: 84902001367     PISSN: 00191019     EISSN: 1474919X     Source Type: Journal    
DOI: 10.1111/ibi.12164     Document Type: Article

References (28)

1. Belkhir, K., Borsa, P., Chikhi, L., Raufaste, N. & Bonhomme, F. 1996-2004. GENETIX 4.05, Logiciel Sous Windows TM Pour la Génétique des Populations. Montpellier, France: Laboratoire Génome, Populations, Interactions, CNRS UMR 5000, Université de Montpellier II.
2. BirdLife International 2012. Species Factsheet: Burhinus oedicnemus. Downloaded from http://www.birdlife.org (accessed 21 October 2012).
3. Brito, P.H. 2007. Contrasting patterns of mitochondrial and microsatellite genetic structure among Western European populations of tawny owls (Strix aluco). Mol. Ecol. 16: 3423-3437.
4. Colwell, M.A. 2010. Shorebird Ecology, Conservation, and Management. Berkeley: University of California Press.
5. Cramp, S. & Simmons, K. (eds) 1983. The Birds of the Western Palearctic, 3rd edn. London: Oxford University Press.
6. Dawson, D.A., Horsburgh, G.J., Küpper, C., Stewart, I.R.K., Ball, A.D., Durrant, K.L., Hansson, B., Bacon, I., Bird, S., Klein, A., Krupa, A.P., Lee, J., Martin-Galvez, D., Simeoni, M., Smitu, G., Spurgin, L.G. & Burke, T. 2010. New methods to identify conserved microsatellite loci and develop primer sets of high cross-species utility - as demonstrated for birds. Mol. Ecol. Resour. 10: 475-494.
7. Delany, S., Scott, D., Dodman, T. & Stroud, D. 2009. An Atlas of Wader Populations in Africa and Western Eurasia. Wageningen: Wetlands International.
8. Excoffier, L. & Lischer, H.E.L. 2010. Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol. Ecol. Resour. 10: 564-567.
9. Goudet, J. 2001. FSTAT, a Program to Estimate and Test Gene Diversities and Fixation Indices Version 2.9.3. Available at: http://www2.unil.ch/popgen/softwares/fstat.htm (accessed 9 January 2012).
10. Green, R.E., Hodson, D.P. & Holness, P.R. 1997. Survival and movements of Stone curlews Burhinus oedicnemus ringed in England. Ringing Migr. 18: 102-112.
11. Greenwood, P. 1980. Mating systems, philopatry and dispersal in birds and mammals. Anim. Behav. 28: 1140-1162.
12. Haig, S.M. & D'Elia, J. 2010. Avian subspecies and the U.S. Endangered Species Act. Ornithol. Monogr. 67: 24-34.
13. Haig, S.M., Beever, E.A., Chambers, S.M., Draheim, H.M., Dugger, B.D., Dunham, S., Elliott-Smith, E., Fontaine, J.B., Kesler1, D.C., Knaus, B.J., Lopes, I.F., Loschl, P., Mullins, T.D. & Sheffield, L.M. 2006. Taxonomic considerations in listing subspecies under the U.S. Endangered Species Act. Conserv. Biol. 20: 1584-1594.
14. Hull, J.M., Mindell, D.P., Talbot, S.L., Kay, E.H., Hoekstra, H.E. & Ernest, H.B. 2010. Population structure and plumage polymorphism: the intraspecific evolutionary relationships of a polymorphic raptor, Buteo jamaicensis harlani. BMC Evol. Biol. 10: 224.
15. Illera, J.C., Rando, J.C., Richardson, D.S. & Emerson, B.C. 2012. Age, origins and extinctions of the avifauna of Macaronesia: a synthesis of phylogenetic and fossil information. Quat. Sci. Rev. 50: 14-22.
16. Küpper, C., Burke, T., Székely, T. & Dawson, D.A. 2008. Enhanced cross-species utility of conserved microsatellite markers in shorebirds. BMC Genomics 9: 502.
17. Küpper, C., Edwards, S.V., Kosztolányi, A., Alrashidi, M., Burke, T., Herrmann, P., Argüelles-Tico, A., Amat, J.A., Amezian, M., Rocha, A., Hötker, H., Ivanov, A., Chernicko, J. & Székely, T. 2012. High gene flow on a continental scale in the polyandrous Kentish Plover Charadrius alexandrinus. Mol. Ecol. 21: 5864-5879.
18. Ortego, J., García-Navas, V., Ferrer, E.S. & Sanz, J.J. 2011. Genetic structure reflects natal dispersal movements at different spatial scales in the Blue Tit, Cyanistes caeruleus. Anim. Behav. 82: 131-137.
19. Paradis, E. 2010. Pegas: an R package for population genetics with an integrated-modular approach. Bioinformatics 26: 419-420.
20. Phillimore, A.B. & Owens, I.P.F. 2006. Are subspecies useful in evolutionary and conservation biology? Proc. R. Soc. Lond. B 273: 1049-1053.
21. Rasmussen, P.C. & Anderton, J.C. 2005. Birds of South Asia: The Ripley Guide, vol. 2. Washington D.C. & Barcelona: Smithsonian Institution & Lynx Edicions.
22. Rousset, F. 2008. Genepop'007: a complete reimplementation of the Genepop software for Windows and Linux. Mol. Ecol. Resour. 8: 103-106.
23. Rozas, J., Sánchez-Delbarrio, J.C., Messeguer, X. & Rozas, R. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19: 2496-2497.
24. Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28: 2731-2739.
25. Van Oosterhout, C., Hutchinson, W.F., Wills, D.P.M. & Shipley, P. 2004. MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes 4: 535-538.
26. Vaughan, R. & Vaughan-Jennings, N. 2005. The Stone Curlew Burhinus oedicnemus. Falmouth: Isabelline books.
27. Zink, R.M. 2004. The role of subspecies in obscuring avian biological diversity and misleading conservation policy. Proc. R. Soc. Lond. B 271: 561-564.
28. Zink, R.M. & Barrowclough, G.F. 2008. Mitochondrial DNA under siege in avian phylogeography. Mol. Ecol. 17: 2107-2121.