Rat retina shows robust circadian expression of clock and clock output genes in explant culture

Molecular Vision

Volumn 20, Issue , 2014, Pages 742-752

  Buonfiglio, Daniella C ^b   Malan, André ^a   Sandu, Cristina ^a   Jaeger, Catherine ^a   Cipolla Neto, José ^b   Hicks, David ^a   Felder Schmittbuhl, Marie Paule ^a  

^a Institut des Neurosciences Cellulaires et Intégratives UPR3212   (France)

^b UNIVERSITY OF SÃO PAULO   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

ARALKYLAMINE ACETYLTRANSFERASE; CRYPTOCHROME 1; CRYPTOCHROME 2; MESSENGER RNA; NUCLEAR RECEPTOR NR1D1; PER1 PROTEIN; PER2 PROTEIN; PROTEIN BMAL1; PROTEIN C FOS; RETINOID RELATED ORPHAN RECEPTOR BETA; TRANSCRIPTION FACTOR CLOCK;

ADULT; ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; BIOLUMINESCENCE; CIRCADIAN RHYTHM; CLOCK GENE; CLOCK OUTPUT GENE; DARKNESS; EXPLANT; GENE; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENE TARGETING; IN VITRO STUDY; LIGHT DARK CYCLE; MALE; NICK END LABELING; NONHUMAN; NUCLEOTIDE SEQUENCE; ONCOGENE C FOS; OSCILLATION; PERIODICITY; PHOTORECEPTOR; PRIORITY JOURNAL; RAT; REAL TIME POLYMERASE CHAIN REACTION; RETINA; RNA SEQUENCE; WILD TYPE; WISTAR RAT;

ANIMALS; BIOLOGICAL CLOCKS; CELL DEATH; CIRCADIAN RHYTHM; CLOCK PROTEINS; CULTURE MEDIA; GENE EXPRESSION REGULATION; LUCIFERASES; LUMINESCENT MEASUREMENTS; PERIOD CIRCADIAN PROTEINS; RATS; RATS, WISTAR; RETINA; RNA, MESSENGER; TIME FACTORS; TISSUE CULTURE TECHNIQUES;

EID: 84901936325     PISSN: None     EISSN: 10900535     Source Type: Journal    
DOI: None     Document Type: Article

References (41)

1. Stratmann M, Schibler U. Properties, entrainment, and physi ological functions of mammalian peripheral oscillators. J Biol Rhythms 2006; 21:494-506. [PMID: 17107939].
2. Ko CH, Takahashi JS. Molecular components of the mamma lian circadian clock. Hum Mol Genet 2006; 15:Spec No 2R271-7. [PMID: 16987893].
3. Bassi CJ, Powers MK. Daily fluctuations in the detectability of dim lights by humans. Physiol Behav 1986; 38:871-7. [PMID: 3823206].
4. Manglapus MK, Uchiyama H, Buelow NF, Barlow RB. Circa dian rhythms of rod-cone dominance in the Japanese quail retina. J Neurosci 1998; 18:4775-84. [PMID: 9614251].
5. Ribelayga C, Cao Y, Mangel SC. The circadian clock in the retina controls rod-cone coupling. Neuron 2008; 59:790-801. [PMID: 18786362].
6. LaVail MM. Rod outer segment disk shedding in rat retina: relationship to cyclic lighting. Science 1976; 194:1071-4. [PMID: 982063].
7. Tosini G, Menaker M. Circadian rhythms in cultured mamma lian retina. Science 1996; 272:419-21. [PMID: 8602533].
8. Pozdeyev NV, Lavrikova EV. Diurnal changes of tyrosine, dopamine, and dopamine metabolites content in the retina of rats maintained at different lighting conditions. J Mol Neurosci 2000; 15:1-9. [PMID: 11211232].
9. Green CB, Besharse JC. Retinal circadian clocks and control of retinal physiology. J Biol Rhythms 2004; 19:91-102. [PMID: 15038849].
10. Iuvone PM, Tosini G, Pozdeyev N, Haque R, Klein DC, Chaurasia SS. Circadian clocks, clock networks, arylalkylamine N-acetyltransferase, and melatonin in the retina. Prog Retin Eye Res 2005; 24:433-56. [PMID: 15845344].
11. Sakamoto K, Ishida N. Circadian expression of serotonin N-acetyltransferase mRNA in the rat retina. Neurosci Lett 1998; 245:113-6. [PMID: 9605498].
12. Yoshida K, Kawamura K, Imaki J. Differential expression of c-fos mRNA in rat retinal cells: regulation by light/dark cycle. Neuron 1993; 10:1049-54. [PMID: 8318229].
13. Bobu C, Sandu C, Laurent V, Felder-Schmittbuhl MP, Hicks D. Prolonged light exposure induces widespread phase shifting in the circadian clock and visual pigment gene expression of the Arvicanthis ansorgei retina. Mol Vis 2013; 19:1060-73. [PMID: 23734075].
14. Storch KF, Paz C, Signorovitch J, Raviola E, Pawlyk B, Li T, Weitz CJ. Intrinsic circadian clock of the mammalian retina: importance for retinal processing of visual information. Cell 2007; 130:730-41. [PMID: 17719549].
15. von Schantz M, Lucas RJ, Foster RG. Circadian oscillation of photopigment transcript levels in the mouse retina. Brain Res Mol Brain Res 1999; 72:108-14. [PMID: 10521605].
16. Kamphuis W, Cailotto C, Dijk F, Bergen A, Buijs RM. Circa dian expression of clock genes and clock-controlled genes in the rat retina. Biochem Biophys Res Commun 2005; 330:18-26. [PMID: 15781226].
17. Ruan GX, Allen GC, Yamazaki S, McMahon DG. An autono mous circadian clock in the inner mouse retina regulated by dopamine and GABA. PLoS Biol 2008; 6:e249-[PMID: 18959477].
18. Ruan GX, Zhang DQ, Zhou T, Yamazaki S, McMahon DG. Circadian organization of the mammalian retina. Proc Natl Acad Sci USA 2006; 103:9703-8. [PMID: 16766660].
19. Sandu C, Hicks D, Felder-Schmittbuhl MP. Rat photoreceptor circadian oscillator strongly relies on lighting conditions. Eur J Neurosci 2011; 34:507-16. [PMID: 21771113].
20. Schneider K, Tippmann S, Spiwoks-Becker I, Holthues H, Wolloscheck T, Spatkowski G, Engel L, Frederiksen U, Spessert R. Unique clockwork in photoreceptor of rat. J Neurochem 2010; 115:585-94. [PMID: 20722965].
21. Tosini G, Kasamatsu M, Sakamoto K. Clock gene expression in the rat retina: effects of lighting conditions and photore ceptor degeneration. Brain Res 2007; 1159:134-40. [PMID: 17560558].
22. Dkhissi-Benyahya O, Coutanson C, Knoblauch K, Lahouaoui H, Leviel V, Rey C, Bennis M, Cooper HM. The absence of melanopsin alters retinal clock function and dopamine regu lation by light. Cell Mol Life Sci 2013; 70:3435-47. [PMID: 23604021].
23. Gekakis N, Staknis D, Nguyen HB, Davis FC, Wilsbacher LD, King DP, Takahashi JS, Weitz CJ. Role of the CLOCK protein in the mammalian circadian mechanism. Science 1998; 280:1564-9. [PMID: 9616112].
24. Miyamoto Y, Sancar A. Vitamin B2-based blue-light photo receptors in the retinohypothalamic tract as the photoactive pigments for setting the circadian clock in mammals. Proc Natl Acad Sci USA 1998; 95:6097-102. [PMID: 9600923].
25. Witkovsky P, Veisenberger E, LeSauter J, Yan L, Johnson M, Zhang DQ, McMahon D, Silver R. Cellular location and circadian rhythm of expression of the biological clock gene Period 1 in the mouse retina. J Neurosci 2003; 23:7670-6. [PMID: 12930806].
26. Tosini G, Davidson AJ, Fukuhara C, Kasamatsu M, Castanon-Cervantes O. Localization of a circadian clock in mamma lian photoreceptors. FASEB J 2007; 21:3866-71. [PMID: 17621597].
27. Yamazaki S, Numano R, Abe M, Hida A, Takahashi R, Ueda M, Block GD, Sakaki Y, Menaker M, Tei H. Resetting central and peripheral circadian oscillators in transgenic rats. Science 2000; 288:682-5. [PMID: 10784453].
28. Schmittgen TD, Zakrajsek BA. Effect of experimental treat ment on housekeeping gene expression: validation by real-time, quantitative RT-PCR. J Biochem Biophys Methods 2000; 46:69-81. [PMID: 11086195].
29. Nelson W, Tong YL, Lee JK, Halberg F. Methods for cosinor-rhythmometry. Chronobiologia 1979; 6:305-23. [PMID: 548245].
30. Ruan GX, Gamble KL, Risner ML, Young LA, McMahon DG. Divergent roles of clock genes in retinal and suprachiasmatic nucleus circadian oscillators. PLoS ONE 2012; 7:e38985-[PMID: 22701739].
31. Sokolove PG, Bushell WN. The chi square periodogram: its utility for analysis of circadian rhythms. J Theor Biol 1978; 72:131-60. [PMID: 566361].
32. Dorenbos R, Contini M, Hirasawa H, Gustincich S, Raviola E. Expression of circadian clock genes in retinal dopaminergic cells. Vis Neurosci 2007; 24:573-80. [PMID: 17705893].
33. Liu X, Zhang Z, Ribelayga CP. Heterogeneous expression of the core circadian clock proteins among neuronal cell types in mouse retina. PLoS ONE 2012; 7:e50602-[PMID: 23189207].
34. Sakamoto K, Liu C, Tosini G. Circadian rhythms in the retina of rats with photoreceptor degeneration. J Neurochem 2004; 90:1019-24. [PMID: 15287909].
35. Oishi K, Sakamoto K, Okada T, Nagase T, Ishida N. Antiphase circadian expression between BMAL1 and period homologue mRNA in the suprachiasmatic nucleus and peripheral tissues of rats. Biochem Biophys Res Commun 1998; 253:199-203. [PMID: 9878515].
36. Teboul M, Barrat-Petit MA, Li XM, Claustrat B, Formento JL, Delaunay F, Levi F, Milano G. Atypical patterns of circadian clock gene expression in human peripheral blood mono nuclear cells. J Mol Med 2005; 83:693-9. [PMID: 16096739].
37. Granda TG, Liu XH, Smaaland R, Cermakian N, Filipski E, Sassone-Corsi P, Levi F. Circadian regulation of cell cycle and apoptosis proteins in mouse bone marrow and tumor. FASEB J 2005; 19:304-6. [PMID: 15545298].
38. Saini C, Morf J, Stratmann M, Gos P, Schibler U. Simulated body temperature rhythms reveal the phase-shifting behavior and plasticity of mammalian circadian oscillators. Genes Dev 2012; 26:567-80. [PMID: 22379191].
39. Sakamoto K, Liu C, Kasamatsu M, Iuvone PM, Tosini G. Intra ocular injection of kainic acid does not abolish the circadian rhythm of arylalkylamine N-acetyltransferase mRNA in rat photoreceptors. Mol Vis 2006; 12:117-24. [PMID: 16518309].
40. Nishide SY, Honma S, Nakajima Y, Ikeda M, Baba K, Ohmiya Y, Honma K. New reporter system for Per1 and Bmal1 expressions revealed self-sustained circadian rhythms in peripheral tissues. Genes Cells 2006; 11:1173-82. [PMID: 16999737].
41. Peirson SN, Butler JN, Duffield GE, Takher S, Sharma P, Foster RG. Comparison of clock gene expression in SCN, retina, heart, and liver of mice. Biochem Biophys Res Commun 2006; 351:800-7. [PMID: 17092486].