Contamination profiles of antibiotic resistance genes in the sediments at a catchment scale

Science of the Total Environment

Volumn 490, Issue , 2014, Pages 708-714

  Su, Hao Chang ^a   Pan, Chang Gui ^a   Ying, Guang Guo ^a   Zhao, Jian Liang ^a   Zhou, Li Jun ^a   Liu, You Sheng ^a   Tao, Ran ^b   Zhang, Rui Quan ^a   He, Liang Ying ^a  

^a GUANGZHOU INSTITUTE OF GEOCHEMISTRY   (China)

^b JINAN UNIVERSITY   (China)

Author keywords

Antibiotic resistance; Integron; Resistance genes; River; Sediment

Indexed keywords

ANTIBIOTICS; CATCHMENTS; COPPER; GENES; POLYMERASE CHAIN REACTION; PRINCIPAL COMPONENT ANALYSIS; RIVER POLLUTION; RIVERS; RUNOFF; SULFUR COMPOUNDS; WATERSHEDS;

ANTIBIOTIC RESISTANCE; ANTIBIOTIC RESISTANCE GENES; AVERAGE CONCENTRATION; CONTAMINATION PROFILES; INTEGRON; MACROLIDE RESISTANCE; QUANTITATIVE POLYMERASE CHAIN REACTION; RESISTANCE GENES;

SEDIMENTS;

CHROMIUM; COPPER; LEAD; MACROLIDE; MANGANESE; NICKEL; SULFONAMIDE; TETRACYCLINE; ZINC; WATER POLLUTANT;

ABUNDANCE; ANTIBIOTIC RESISTANCE; CATCHMENT; CONCENTRATION (COMPOSITION); DRY SEASON; FLUVIAL DEPOSIT; POLYMERASE CHAIN REACTION; PRINCIPAL COMPONENT ANALYSIS; SEDIMENT POLLUTION; WET SEASON;

ANTIBIOTIC RESISTANCE; ARTICLE; CATCHMENT; CHINA; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; ECOLOGICAL GENETICS; ERMB GENE; ERMC GENE; ERMF GENE; GENE; GENOTYPE ENVIRONMENT INTERACTION; INTEGRON; INTI1 GENE; INTI2 GENE; PRINCIPAL COMPONENT ANALYSIS; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION; SEASONAL VARIATION; SEDIMENT; SUL1 GENE; SUL2 GENE; SUL3 GENE; TETA GENE; TETB GENE; TETM GENE; TETO GENE; TETQ GENE; TETS GENE; TETW GENE; TETX GENE; WATER POLLUTION; ANALYSIS; BACTERIAL GENE; CHEMISTRY; ENVIRONMENTAL MONITORING; GENETICS; MICROBIOLOGY; WATER POLLUTANT;

CHINA; DONG RIVER;

CHINA; DRUG RESISTANCE, MICROBIAL; ENVIRONMENTAL MONITORING; GENES, BACTERIAL; GEOLOGIC SEDIMENTS; WATER MICROBIOLOGY; WATER POLLUTANTS;

EID: 84901846084     PISSN: 00489697     EISSN: 18791026     Source Type: Journal    
DOI: 10.1016/j.scitotenv.2014.05.060     Document Type: Article

References (41)

1. Andersson D.I., Levin B.R. The biological cost of antibiotic resistance. Curr Opin Microbiol 1999, 2:489-493.
2. Caplin J.L., Hanlon G.W., Taylor H.D. Presence of vancomycin and ampicillin-resistant Enterococcus faecium of epidemic clonal complex-17 in wastewaters from the south coast of England. Environ Microbiol 2008, 10:885-892.
3. Cernat R., Balotescu C., Ivanescu D., Nedelcu D., Lazar V., Bucur M., et al. Mechanisms of resistance in multiple-antibiotic-resistant Escherichia coli strains isolated from drinking and recreational, salmaster waters. Int J Antimicrob Agents 2007, 29:S274-S274.
4. Deckert A., Valdivieso-Garcia A., Reid-Smith R., Tamblyn S., Seliske P., Irwin R., et al. Prevalence and antimicrobial resistance in Campylobacter spp. isolated from retail chicken in two health units in Ontario. J Food Prot 2010, 73:1317-1324.
5. Durham L.K., Ge M., Cuccia A.J., Quinn J.P. Modeling antibiotic resistance to project future rates: quinolone resistance in Escherichia coli. Eur J Clin Microbiol Infect Dis 2010, 29:353-356.
6. El-Mansi M., Anderson K.J., Inche C.A., Knowles L.K., Platt D.J. Isolation and curing of the Klebsiella pneumoniae large indigenous plasmid using sodium dodecyl sulphate. Res Microbiol 2000, 151:201-208.
7. Faria C., Vaz-Moreira I., Serapicos E., Nunes O.C., Manaia C.M. Antibiotic resistance in coagulase negative staphylococci isolated from wastewater and drinking water. Sci Total Environ 2009, 407:3876-3882.
8. Graham D.W., Olivares-Rieumont S., Knapp C.W., Lima L., Werner D., Bowen E. Antibiotic resistance gene abundances associated with waste discharges to the Almendares River near Havana, Cuba. Environ Sci Technol 2011, 45:418-424.
9. Hoyle D., Davison H.C., Knight H., Yates C.M., Dobay O., Gunn G.J., et al. Molecular characterisation of bovine faecal Escherichia coli shows persistence of defined ampicillin resistant strains and the presence of class 1 integrons on an organic beef farm. Vet Microbiol 2006, 115:250-257.
10. Hughes M.K., Yanamala S., Francisco M.S., Loneragan G.H., Miller M.F., Brashears M.M. Reduction of multidrug-resistant and drug-susceptible Salmonella in ground beef and freshly harvested beef briskets after exposure to commonly used industry antimicrobial interventions. J Food Prot 2010, 73:1231-1237.
11. Ishida Y., Ahmed A.M., Mahfouz N.B., Kimura T., El-Khodery S.A., Moawad A.A., et al. Molecular analysis of antimicrobial resistance in gram-negative bacteria isolated from fish farms in Egypt. J Vet Med Sci 2010, 72:727-734.
12. Islam M.S., Sarker M.J., Yamamoto T., Wahab M.A., Tanaka M. Water and sediment quality, partial mass budget and effluent N loading in coastal brackishwater shrimp farms in Bangladesh. Mar Pollut Bull 2004, 48:471-485.
13. Knapp C.W., Lima L., Olivares-Rieumont S., Bowen E., Werner D., Graham D.W. Seasonal variations in antibiotic resistance gene transport in the Almendares River, Havana, Cuba. Front Microbiol 2012, 3:396.
14. Koksal F., Oguzkurt N., Samasti M., Altas K. Prevalence and antimicrobial resistance patterns of Aeromonas strains isolated from drinking water samples in Istanbul, Turkey. Chemotherapy 2007, 53:30-35.
15. Kristiansson E., Fick J., Janzon A., Grabic R., Rutgersson C., Weijdegard B., et al. Pyrosequencing of antibiotic-contaminated river sediments reveals high levels of resistance and gene transfer elements. PLoS One 2011, 6.
16. Kruse H., Sorum H. Transfer of multiple-drug resistance plasmids between bacteria of diverse origins in natural microenvironments. Appl Environ Microbiol 1994, 60:4015-4021.
17. LaPara T.M., Burch T.R., McNamara P.J., Tan D.T., Yan M., Eichmiller J.J. Tertiary-treated municipal wastewater is a significant point source of antibiotic resistance genes into Duluth-Superior Harbor. Environ Sci Technol 2011, 45:9543-9549.
18. Lu S.Y., Zhang Y.L., Geng S.N., Li T.Y., Ye Z.M., Zhang D.S., et al. High diversity of extended-spectrum beta-lactamase-producing bacteria in an urban river sediment habitat. Appl Environ Microbiol 2010, 76:5972-5976.
19. Luo Y., Mao D.Q., Rysz M., Zhou D.X., Zhang H.J., Xu L., et al. Trends in antibiotic resistance genes occurrence in the Haihe River, China. Environ Sci Technol 2010, 44:7220-7225.
20. Ochman H., Lawrence J.G., Groisman E.A. Lateral gene transfer and the nature of bacterial innovation. Nature 2000, 405:299-304.
21. Pei R.T., Kim S.C., Carlson K.H., Pruden A. Effect of River Landscape on the sediment concentrations of antibiotics and corresponding antibiotic resistance genes (ARG). Water Res 2006, 40:2427-2435.
22. Pruden A., Pei R.T., Storteboom H., Carlson K.H. Antibiotic resistance genes as emerging contaminants: studies in northern Colorado. Environ Sci Technol 2006, 40:7445-7450.
23. Ram S., Vaipayee P., Shanker R. Contamination of potable water distribution systems by multiantimicrobial-resistant enterohemorrhagic Escherichia coli. Environ Health Perspect 2008, 116:448-452.
24. Schweitzer N., Damjanova I., Kaszanyitzky E., Ursu K., Samu P., Toth A.G., et al. Molecular characterization of Campylobacter lanienae strains isolated from food-producing animals. Foodborne Pathog Dis 2011, 8:615-621.
25. Sidjabat H.E., Townsend K.M., Lorentzen M., Gobius K.S., Fegan N., Chin J.J.C., et al. Emergence and spread of two distinct clonal groups of multidrug-resistant Escherichia coli in a veterinary teaching hospital in Australia. J Med Microbiol 2006, 55:1125-1134.
26. Smillie C., Garcillan-Barcia M.P., Francia M.V., Rocha E.P.C., de la Cruz F. Mobility of plasmids. Microbiol Mol Biol Rev 2010, 74:434-440.
27. Srinivasan V., Nam H.M., Nguyen L.T., Tamilselvam B., Murinda S.E., Oliver S.P. Prevalence of antimicrobial resistance genes in Listeria monocytogenes isolated from dairy farms. Foodborne Pathog Dis 2005, 2:201-211.
28. Storteboom H., Arabi M., Davis J.G., Crimi B., Pruden A. Identification of antibiotic-resistance-gene molecular signatures suitable as tracers of pristine river, urban, and agricultural sources. Environ Sci Technol 2010, 44:1947-1953.
29. Storteboom H., Arabi M., Davis J.G., Crimi B., Pruden A. Tracking antibiotic resistance genes in the South Platte River Basin using molecular signatures of urban, agricultural, and pristine sources. Environ Sci Technol 2010, 44:7397-7404.
30. Su H.C., Ying G.G., Tao R., Zhang R.Q., Fogarty L.R., Kolpin D.W. Occurrence of antibiotic resistance and characterization of resistance genes and integrons in Enterobacteriaceae isolated from integrated fish farms in south China. J Environ Monit 2011, 13:3229-3236.
31. Su H.C., Ying G.G., Tao R., Zhang R.Q., Zhao J.L., Liu Y.S. Class 1 and 2 integrons, sul resistance genes and antibiotic resistance in Escherichia coli isolated from Dongjiang River, South China. Environ Pollut 2012, 169:42-49.
32. Tamminen M., Karkman A., Lohmus A., Muziasari W.I., Takasu H., Wada S., et al. Tetracycline resistance genes persist at aquaculture farms in the absence of selection pressure. Environ Sci Technol 2011, 45:386-391.
33. Vinue L., Saenz Y., Rojo-Bezares B., Olarte I., Undabeitia E., Somalo S., et al. Genetic environment of sul genes and characterisation of integrons in Escherichia coli isolates of blood origin in a Spanish hospital. Int J Antimicrob Agents 2010, 35:492-496.
34. Wang L., Ying G.G., Zhao J.L., Liu S., Yang B., Zhou L.J., et al. Assessing estrogenic activity in surface water and sediment of the Liao River system in northeast China using combined chemical and biological tools. Environ Pollut 2011, 159:148-156.
35. World Health Organization (WHO) WHO annual report on infectious disease: overcoming antimicrobial resistance 2000, World Health Organization, Geneva, Switzerland, http://www.who.int/infectious-disease-report/2000/.
36. Xi C.W., Zhang Y.L., Marrs C.F., Ye W., Simon C., Foxman B., et al. Prevalence of antibiotic resistance in drinking water treatment and distribution systems. Appl Environ Microbiol 2009, 75:5714-5718.
37. Xia L.N., Li L., Wu C.M., Liu Y.Q., Tao X.Q., Dai L., et al. A survey of plasmid-mediated fluoroquinolone resistance genes from Escherichia coli isolates and their dissemination in Shandong, China. Foodborne Pathog Dis 2010, 7:207-215.
38. Yang S.W., Carlson K. Evolution of antibiotic occurrence in a river through pristine, urban and agricultural landscapes. Water Res 2003, 37:4645-4656.
39. Yuan C.G., Shi J.B., He B., Liu J.F., Liang L.N., Jiang G.B. Speciation of heavy metals in marine sediments from the East China Sea by ICP-MS with sequential extraction. Environ Int 2004, 30:769-783.
40. Zhang X.X., Zhang T. Occurrence, abundance, and diversity of tetracycline resistance genes in 15 sewage treatment plants across China and other global locations. Environ Sci Technol 2011, 45:2598-2604.
41. Zhou L.J., Ying G.G., Liu S., Zhao J.L., Chen F., Zhang R.Q., et al. Simultaneous determination of human and veterinary antibiotics in various environmental matrices by rapid resolution liquid chromatography-electrospray ionization tandem mass spectrometry. J Chromatogr A 2012, 1244:123-138.