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Volumn 30, Issue 14, 2014, Pages 2076-2078

VariantAnnotation: A Bioconductor package for exploration and annotation of genetic variants

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER PROGRAM; GENETIC VARIABILITY; GENOMICS; MOLECULAR GENETICS;

EID: 84901835522     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btu168     Document Type: Article
Times cited : (244)

References (11)
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  • 3
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    • Bioconductor: Open software development for computational biology and bioinformatics
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    • (2004) Genome Biol. , vol.5
    • Gentleman, R.C.1
  • 4
    • 79951993896 scopus 로고    scopus 로고
    • Tabix: Fast retrieval of sequence features from generic TABdelimited files
    • Heng, L. (2010) Tabix: fast retrieval of sequence features from generic TABdelimited files. Bioinformatics, 27, 718-719.
    • (2010) Bioinformatics , vol.27 , pp. 718-719
    • Heng, L.1
  • 5
    • 84863229597 scopus 로고    scopus 로고
    • VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
    • Koboldt, D. et al. (2012) VarScan 2: somatic mutation and copy number alteration discovery in cancer by exome sequencing. Genome Res., 22, 568-576.
    • (2012) Genome Res. , vol.22 , pp. 568-576
    • Koboldt, D.1
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    • Software for computing and annotating genomic ranges
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    • Lawrence, M.1
  • 7
    • 77956295988 scopus 로고    scopus 로고
    • The genome analysis toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
    • McKenna, A. et al. (2010) The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res., 20, 1297-1303.
    • (2010) Genome Res. , vol.20 , pp. 1297-1303
    • McKenna, A.1
  • 8
    • 77955405475 scopus 로고    scopus 로고
    • Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor
    • McLaren, W. et al. (2010) Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor. BMC Bioinformatics, 26, 2069-2070.
    • (2010) BMC Bioinformatics , vol.26 , pp. 2069-2070
    • McLaren, W.1
  • 9
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    • An integrated map of genetic variation from 1,092 human genomes
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    • The 1000 Genomes Project Consortium. (2012) An integrated map of genetic variation from 1,092 human genomes. Nature, 491, 56-65.
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    • ANNOVAR: Functional annotation of genetic variants from high-throughput sequencing data
    • Wang, K. et al. (2010) ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res., 38, e164.
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    • Ggbio: An R package for extending the grammar of graphics for genomic data
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.