The towering orogeny of New Guinea as a trigger for arthropod megadiversity

Nature Communications

Volumn 5, Issue , 2014, Pages

  Toussaint, Emmanuel F A ^a   Hall, Robert ^b   Monaghan, Michael T ^c   Sagata, Katayo ^d   Ibalim, Sentiko ^e   Shaverdo, Helena V ^f   Vogler, Alfried P ^g,h   Pons, Joan ⁱ   Balke, Michael ^a,j  

^a ZOOLOGISCHE STAATSSAMMLUNG MÜNCHEN   (Germany)

^b UNIVERSITY OF LONDON   (United Kingdom)

^c LEIBNIZ INSTITUTE OF FRESHWATER ECOLOGY AND INLAND FISHERIES   (Germany)

^d Papua New Guinea Institute for Biological Research   (Papua New Guinea)

^e New Guinea Binatung Research Centre   (Papua New Guinea)

^f NATURHISTORISCHES MUSEUM WIEN   (Austria)

^g DEPARTMENT OF LIFE SCIENCES   (United Kingdom)

^h IMPERIAL COLLEGE LONDON   (United Kingdom)

ⁱ INSTITUTO MEDITERRÁNEO DE ESTUDIOS AVANZADOS   (Spain)

^j UNIVERSITY OF MUNICH   (Germany)

more..

Author keywords

[No Author keywords available]

Indexed keywords

FRESH WATER;

ALLOPATRY; ARTHROPOD; CARRYING CAPACITY; ISLAND ARC; OROGENY; RECOLONIZATION; SPECIES DIVERSITY;

ARTHROPOD; ARTICLE; AUSTRALIA; BEETLE; CELL LINEAGE; ECOLOGY; LAND BIOME; NONHUMAN; PAPUA NEW GUINEA; PHYLOGENY; SPECIES DIVERSITY; ANIMAL; BAYES THEOREM; BIODIVERSITY; EVOLUTION; GENETICS; MOLECULAR EVOLUTION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGEOGRAPHY;

MELANESIA; NEW GUINEA;

ANIMALS; ARTHROPODS; BASE SEQUENCE; BAYES THEOREM; BIODIVERSITY; BIOLOGICAL EVOLUTION; ECOLOGY; EVOLUTION, MOLECULAR; MOLECULAR SEQUENCE DATA; NEW GUINEA; PHYLOGENY; PHYLOGEOGRAPHY;

EID: 84901781508     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/ncomms5001     Document Type: Article

References (67)

1. Mayr, E. & Diamond, J. M. Birds on islands in the sky: Origin of the montane avifauna of Northern Melanesia. Proc. Natl Acad. Sci. USA 73, 1765-1769 (1976).
2. Knox, E. B. & Palmer, J. D. Chloroplast DNA variation and the recent radiation of the giant senecios (Asteraceae) on the tall mountains of eastern Africa. Proc. Natl Acad. Sci. USA 92, 10349-10353 (1995).
3. Gressitt, J. L. Biogeography and Ecology of New Guinea Vol. 1 & 2 (Dr. W. Junk publishers, 1982).
4. Wallace, A. R. On the zoological geography of the Malay archipelago. J. Proc. Linn. Soc. 4, 172-184 (1860).
5. Wilson, E. O. The nature of the taxon cycle in the Melanesian ant fauna. Am. Nat. 95, 169-193 (1961).
6. Diamond, J. M. Avifauna of the eastern highlands of New Guinea, 438 (Nuttall Ornithological Club, 1972).
7. Gressitt, J. L. Systematics and biogeography of the longicorn beetle tribe Tmesisternini. Pac. Insects Monogr. 41, 1-263 (1984).
8. Baldwin, S. L., Fitzgerald, P. G. & Webb, L. E. Tectonics of the New Guinea Region. Annu. Rev. Earth Planet. Sci. 40, 495-520 (2012).
9. Hope, G. S. The Equatorial Glaciers of New Guinea, Results of the 1971-1973 Australian Universities' Expeditions to Irian Jaya, Survey, Glaciology, Meteorology, Biology and Palaeoenvironments (Balkema, 1976).
10. Unmack, P. J., Allen, G. R. & Johnson, J. B. (2013 Phylogeny and biogeography of rainbowfishes (Melanotaeniidae) from Australia and New Guinea. Mol. Phylogenet. Evol. 67, 15-27 (2013).
11. Jønsson, K. A., Fabre, P.-H., Ricklefs, R. E. & Fjeldsa, J. Major global radiation of corvoid birds originated in the proto-Papuan archipelago. Proc. Natl Acad. Sci. USA 108, 2328-2333 (2011).
12. Georges, A. et al. Contemporary genetic structure of an endemic freshwater turtle reflects Miocene orogenesis of New Guinea. Biol. J. Linn. Soc. 111, 192-208 (2014).
13. Kalkman, V. J., Dijkstra, K. B., Dow, R. A., Stokvis, F. R. & van Tol, J. Out of Australia: the Argiolestidae reveal the Melanesian Arc System and East Papua Composite Terrane as possible ancient dispersal routes to the Indo-Australian archipelago (Odonata, Argiolestidae). PhD thesis (Natural Biodiversity Center, Leiden (2013).
14. De Boer, A. J. & Duffels, J. P. Historical biogeography of the cicadas of Wallacea, New Guinea and the West Pacific, a geotectonic explanation. Palaeogeogr. Palaeoclimatol. Palaeoecol 124, 153-177 (1996). (Pubitemid 26309263)
15. Polhemus, D. A. Island arcs, and their influence on Indo-Pacific biogeography. in The origin and evolution of Pacific island biotas, New Guinea to eastern Polynesia: patterns and processes 51-66 (SPB Academic Publishing, 1996).
16. Deiner, K., Lemmon, A. R., Mack, A. L., Fleischer, R. C. & Dumbacher, J. P. A Passerine Bird's evolution corroborates the geologic history of the island of New Guinea. PloS ONE 6, e19479 (2011).
17. Norman, J. A., Rheindt, F. E., Rowe, D. L. & Christidis, L. Speciation dynamics in the Australo-Papuan Meliphaga honeyeaters. Mol. Phylogenet. Evol. 42, 80-91 (2007). (Pubitemid 44750704)
18. Zwiers, P. B., Borgia, G. & Fleischer, R. C. Plumage based classification of the bowerbird genus Sericulus evaluated using a multi-gene, multi-genome analysis. Mol. Phylogenet. Evol. 46, 923-931 (2008).
19. Macqueen, P., Goldizen, A. W., Austin, J. J. & Seddon, J. M. Phylogeography of the pademelons (Marsupialia: Macropodidae: Thylogale) in New Guinea reflects both geological and climatic events during the Plio-Pleistocene. J. Biogeogr. 38, 1732-1747 (2011).
20. Meredith, R. W., Mendoza, M., Roberts, K. K., Westerman, M. & Springer, M. S. A phylogeny and timescale for the evolution of Pseudocheiridae (Marsupialia: Diprotodontia) in Australia and New Guinea. J. Mamm. Evol. 17, 75-99 (2010).
21. Rowe, K. C., Reno, M. L., Richmond, D. M., Adkins, R. M. & Steppan, S. J. Pliocene colonization and adaptive radiations in Australia and New Guinea (Sahul): multilocus systematics of the old endemic rodents (Muroidea, Murinae). Mol. Phylogenet. Evol. 47, 84-101 (2008).
22. Rowe, K. C., Aplin, K. P., Baverstock, P. R. & Moritz, C. Recent and rapid speciation with limited morphological disparity in the genus Rattus. Syst. Biol. 60, 188-203 (2011).
23. Malekian, M., Cooper, S. J. B., Norman, J., Christidis, L. & Carthew, S. M. Molecular systematics and evolutionary origins of the genus Petaurus (Marsupialia, Petauridae) in Australia and New Guinea. Mol. Phylogenet. Evol. 54, 122-135 (2010).
24. Hall, R. in Biogeography and Geological Evolution of SE Asia. (eds Hall, R. & Holloway, J. D.) 99-131 (Backhuys Publishers, 1998).
25. Cloos, M. Collisional Delamination in New Guinea: The Geotectonics of Subducting Slab Breakoff Vol. 400 (ed. Cloos, M.) (Geological Society of America, 2005).
26. Dumbacher, J. P. & Fleischer, R. C. Phylogenetic evidence for color-pattern convergence in toxic pitohuis: Müllerian mimicry in birds? Proc. Roy. Soc. B 268, 1971-1976 (2001). (Pubitemid 32964462)
27. Joseph, L., Slikas, B., Alpers, D. & Schodde, R. Molecular systematics and phylogeography of New Guinean logrunners (Orthonychidae). Emu 101, 273-280 (2001). (Pubitemid 34082184)
28. van Ufford, A. Q. & Cloos, M. Cenozoic tectonics of New Guinea. Am. Assoc. Petr. Geol. B 89, 119-140 (2005). (Pubitemid 40112564)
29. Hall, R. Cenozoic geological and plate tectonic evolution of SE Asia and the SW Pacific: computer-based reconstructions, model and animations. J. Asian Earth Sci. 20, 353-434 (2002).
30. Hill, K. C. & Hall, R. Mesozoic-Cenozoic evolution of Australia's New Guinea margin in a west Pacific context. in Evolution and Dynamics of the Australian Plate. (eds Hillis, R. R. & Müller, R. D.) 265-289 (Geological Society of Australia Special Publication 22 and Geological Society of America Special Papers, 2003).
31. Beebe, N. W. & Cooper, R. D. Distribution and evolution of the Anopheles punctulatus group (Diptera: Culicidae) in Australia and Papua New Guinea. Int. J. Parasitol. 32, 563-574 (2002). (Pubitemid 34273807)
32. Shaverdo, H. V., Surbakti, S., Hendrich, L. & Balke, M. Introduction of the Exocelina ekari-group with descriptions of 22 new species from New Guinea (Coleoptera, Dytiscidae, Copelatinae). ZooKeys 250, 1-76 (2012).
33. Pigram, C. J. & Davies, H. L. Terranes and the accretion history of the New Guinea orogen. BMR J. Aust. Geol. Geop. 10, 193-212 (1987).
34. Hill, K. C. & Raza, A. Arc-continent collision in Papua Guinea, Constraints from fission track thermochronology. Tectonics 18, 950-966 (1999). (Pubitemid 30149887)
35. Pigram, C. J. & Symonds, P. A. A review of the timing of the major tectonic events in the New Guinea Orogen. J. South Asian Earth 6, 307-318 (1991).
36. Struckmeyer, H. I. M., Yeung, M. & Pigram, C. J. in Proc. 2nd PNG Petrol. Conv. Petroleum Exploration and Development in Papua New Guinea 261-290 Port Moresby, Papua New Guinea, 1993.
37. Balke, M., Pons, J., Ribera, I., Sagata, K. & Vogler, A. P. Infrequent and unidirectional colonization of hyperdiverse Papuadytes diving beetles in New Caledonia and New Guinea. Mol. Phylogenet. Evol. 42, 505-516 (2007). (Pubitemid 44751520)
38. Toussaint, E. F. A., Sagata, K., Surbakti, S., Hendrich, L. & Balke, M. Australasian sky islands act as a diversity pump facilitating peripheral speciation and complex reversal from narrow endemic to widespread ecological supertramp. Ecol. Evol. 3, 1031-1049 (2013).
39. Ribera, I., Barraclough, T. G. & Vogler, A. P. The effect of habitat type on speciation rates and range movements in aquatic beetles: inferences from species-level phylogenies. Mol. Ecol. 10, 721-735 (2001). (Pubitemid 32406357)
40. Janzen, D. H. Why mountain passes are higher in the tropics. Am. Nat. 101, 233-249 (1967).
41. Illies, J. Versuch einer allgemeinen biozönotischen Gliederung der Flie-gewässer. Int. Rev. Hydrobiol. 46, 205-213 (1961).
42. Statzner, B. & Dolédec, S. Phylogenetic, spatial, and species-trait patterns across environmental gradients: the case of Hydropsyche (Trichoptera) along the Loire River. Int. Rev. Hydrobiol. 96, 121-140 (2011).
43. Vuataz, L., Sartori, M., Gattolliat, J.-L. & Monaghan, M. T. Endemism and diversification in freshwater insects of Madagascar revealed by coalescent and phylogenetic analysis of museum and field collections. Mol. Phylogenet. Evol. 66, 979-991 (2013).
44. Edgar, R. C. MUSCLE, Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32, 1792-1797 (2004). (Pubitemid 38832724)
45. Darriba, D., Taboada, G. L., Doallo, R. & Posada, D. jModelTest 2, more models, new heuristics and parallel computing. Nat. Methods 9, 772 (2012).
46. Lanfear, R., Calcott, B., Ho, S. Y. & Guindon, S. PartitionFinder, combined selection of partitioning schemes and substitution models for phylogenetic analyses. Mol. Biol. Evol. 29, 1695-1701 (2012).
47. Ronquist, F. et al. MrBayes 3.2, Efficient Bayesian phylogenetic inference and model choice across a large model space. Syst. Biol. 61, 539-542 (2012).
48. Kass, R. & Raftery, A. Bayes factors. J. Am. Statist. 90, 773-795 (1995).
49. Rambaut, A. & Drummond, A. J. Tracer, version 1.4 (2007).
50. Baele, G. et al. Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty. Mol. Biol. Evol. 29, 2157-2167 (2012).
51. Xie, W., Lewis, P. O., Fan, Y., Kuo, L. & Chen, M.-H. Improving marginal likelihood estimation for Bayesian phylogenetic model selection. Syst. Biol. 60, 150-160 (2011).
52. Brown, J. M. & Lemmon, A. R. The importance of data partitioning and the utility of Bayes factors in Bayesian phylogenetics. Syst. Biol. 56, 643-655 (2007).
53. Stamatakis, A. RAxML-VI-HP: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22, 2688-2690 (2006). (Pubitemid 44642609)
54. Erixon, P., Svennblad, B., Britton, T. & Oxelman, B. Reliability of Bayesian posterior probabilities and bootstrap frequencies in phylogenetics. Syst. Biol. 52, 665-673 (2003). (Pubitemid 37365047)
55. Felsenstein, J. Inferring phylogenies (Sinauer Associates, 2004).
56. Balke, M. et al. New Guinea highland origin of a widespread arthropod supertramp. Proc. R.. Soc. B 276, 2359-2367 (2009).
57. Papadopoulou, A., Anastasiou, I. & Vogler, A. P. Revisiting the insect mitochondrial molecular clock: the mid-Aegean trench calibration. Mol. Biol. Evol. 27, 1659-1672 (2010).
58. Andújar, C., Serrano, J. & Gómez-Zurita, J. Winding up the molecular clock in the genus Carabus (Coleoptera: Carabidae): assessment of methodological decisions on rate and node age estimation. BMC Evol. Biol. 12, 40 (2012).
59. Swofford, D. L. PAUP. Phylogenetic Analysis Using Parsimony (and Other Methods). Version 4 (Sinauer Associates, 2003).
60. Drummond, A. J., Suchard, M. A., Xie, D. & Rambaut, A. Bayesian phylogenetics with BEAUti and the BEAST 1.7. Mol. Biol. Evol. 29, 1969-1973 (2012).
61. Gressitt, J. L. & Nadkarni, N. Guide to Mt Kaindi: Background to Montane New Guinea Ecology (No. 5) (Wau Ecology Institute, 1978).
62. Johns, R. J. Plant zonation. in Biogeography and Ecology of New Guinea 309-330 (Springer, 1982).
63. Paradis, E., Claude, J. & Strimmer, K. APE: analyses of phylogenetics and evolution in R language. Bioinformatics 20, 289-290 (2004). (Pubitemid 38195693)
64. Stadler, T. Mammalian phylogeny reveals recent diversification rate shifts. Proc. Natl Acad. Sci. USA 108, 6187-6192 (2011).
65. Stadler, T. Simulating trees on a fixed number of extant species. Syst. Biol. 60, 676-684 (2011).
66. Etienne, R. S. et al. Diversity-dependence brings molecular phylogenies closer to agreement with the fossil record. Proc. Roy. Soc. B 279, 1300-1309 (2012).
67. Cusimano, N., Stadler, T. & Renner, S. A new method for handling missing species in diversification analysis applicable to randomly or non-randomly sampled phylogenies. Syst. Biol. 61, 785-792 (2012).