Analysis of gene expression in the brain using differential display

Handbook of Neurochemistry and Molecular Neurobiology: Practical Neurochemistry Methods

Volumn , Issue , 2007, Pages 371-385

  Gilby, K L ^a   Denovan Wright, E M ^a  

^a DALHOUSIE UNIVERSITY   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84901163174     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-0-387-30401-4_17     Document Type: Chapter

References (34)

1. Ahmed FE. 2002. Molecular techniques for studying gene expression in carcinogenesis. J Environ Sci Health C20(2): 77.
2. Bartlett JMS. 2003. Differential display: a technical overview. Methods Mol Biol 226: 217.
3. Brett D, Pospisil H, Valcarcel J, Reich J, Bork P. 2002. Alternative splicing and genome complexity. Nat Genet 30: 29.
4. Brown PO, Botstein. 1999. Exploring the new world of the genome with DNA microarrays. Nat Genet 21: 33.
5. Cho Y, Prezioso VR, Liang P. 2002. Systematic analysis of intrinsic factors affecting differential display. Biotechniques 32: 762.
6. Denovan-Wright EM, Ferrier GR, Robertson HA, Howlett SE. 2000. Increased expression of the gene for a-interferon inducible protein in cardiomyopathic hamster heart. Biochem Biophys Res Comm 267: 103.
7. Denovan-Wright EM, Howlett SE, Robertson HA. 1999. Direct cloning of differential display products eluted from Northern blots. Biotechniques 26: 1046.
8. Ding C, Cantor CR. 2004. Quantitative analysis of nucleic acids-the last few years of progress. J Biochem Mol Biol 37(1): 1.
9. Eberwine J, Kacharmina JE, Andrews C, Miyashiro K, McIntosh T, et al. 2001. mRNA Expression analysis of tissue sections and single cells. J Neurosci 21: 8310.
10. Geschwind DH. 2000. Mice, microarrays and the genetic diversity of the brain. Proc Natl Acad Sci USA 97: 10676.
11. Halgren RG, Fielden MR, Fong CJ, Zacharewski TR. 2001. Assessment of clone identity and sequence fidelity for 1189 IMAGE cDNA clones. Nucleic Acids Res 29(2): 582.
12. Hanke J, Brett D, Zastrow I, Aydin A, Delbruck S, et al. 1999. Alternative splicing of human genes: more the rule than the exception. Trends Genet 15: 389.
13. Jurecic R, Nachtman RG, Colicos SM, Belmont JW. 1998. Identification and cloning of differentially expressed genes by long-distance differential display. Anal Biochem 259: 235.
14. Kuno N, Muramatsu T, Hamazato F, Furuya M. 2000. Identification by large-scale screening of phytochrome-regulated genes in etiolated seedlings of Arabidopsis using a fluorescent differential display technique. Plant Physiol 122: 15.
15. Liang P. 2002. A decade of differential display. Biotechniques 33: 338.
16. Liang P, Averboukh L, Pardee AB. 1993. Distribution and cloning of eukaryotic mRNAs by means of differential display: refinements and optimization. Nucleic Acids Res 21:3269.
17. Liang P, Pardee AB. 1995. Recent advances in differential display. Curr Opin Immunol 7: 274.
18. Liang P, Pardee AB. 2003. Analyzing differential gene expression in cancer. Nat Rev 3: 869.
19. Liao VH, Freedman JH. 1998. Cadmium-regulated genes from the nematode Caenorhabditis elegans. J Biol Chem 273: 31962.
20. Lockhart DJ, Winzeler EA. 2000. Genomics, gene expression and DNA arrays. Nature 405: 827.
21. Matz MV, Lukyanov SA. 1998. Different strategies of differential display: areas of application. Nucleic Acids Res 26: 5537.
22. Matz M, Usman N, Shagin D, Bogdanova E, Lukyanov S. 1997. Ordered differential display: a simple method for systematic comparison of gene expression profiles. Nucleic Acids Res 25: 2541.
23. Mironov AA, Fickett JW, Gelfand MS. 1999. Frequent alternative splicing of human genes. Genome Res 9: 1288.
24. Planitzer SA, Machl AW, Schindler D, Kubbies M. 1998. Small deletions in the regulatory 3 0 UTR of the human alphatropomyosin gene identified by differential display. Mol Cell Probes 12(1): 35.
25. Racine RJ, Steingart M, McIntyre DC. 1999. Development of kindling prone and kindling resistant rats: selective breeding and electrophysiological studies. Epilepsy Res 35(3): 183.
26. Sambrook J, Russell DW. 2001. Molecular cloning: a laboratory manual. Cold Spring Harbor: Cold Spring Harbor Laboratory Press.
27. Sandberg R, Yasuda R, Pankratz D, Carter T, Del Rio J, et al. 2000. Regional and strain-specific gene expression mapping in the adult mouse brain. Proc Natl Acad Sci USA 97: 11038.
28. Simon H-G, Oppenheimer S. 1996. Advanced mRNA differential display: isolation of a new differentially regulated myosin heavy chain-encoding gene in amphibian limb regeneration. Gene 172: 175.
29. Stein J, Liang P. 2002. Differential display technology: a general guide. Cell Mol Life Sci 59: 1235.
30. The International Genome Sequencing Consortium. 2001. Initial sequencing and analysis of the human genome. Nature 409: 860.
31. To K. 2000. Identification of differential gene expression by high throughput analysis. Comb Chem High Throughput Screen 3: 235.
32. Venter C, et al. 2001. The sequence of the human genome. Science 16: 1304.
33. Wan JS, Sharp SJ, Poirer GMC, Wagaman PC, Chambers J, et al. 1996. Cloning differentially expressed mRNAs. Nat Biotechnol 14: 1685.
34. Wilkinson DG. 1999. In situ Hybridization: a Practical Approach 2nd. Edition. New York: Oxford University Press; pp 1-221.