-
1
-
-
77249170184
-
Establishing, maintaining and modifying DNA methylation patterns in plants and animals
-
Law JA, Jacobsen SE (2010) Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet 11(3):204-220.
-
(2010)
Nat Rev Genet
, vol.11
, Issue.3
, pp. 204-220
-
-
Law, J.A.1
Jacobsen, S.E.2
-
2
-
-
0037041422
-
Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase
-
Jackson JP, Lindroth AM, Cao X, Jacobsen SE (2002) Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase. Nature 416(6880):556-560.
-
(2002)
Nature
, vol.416
, Issue.6880
, pp. 556-560
-
-
Jackson, J.P.1
Lindroth, A.M.2
Cao, X.3
Jacobsen, S.E.4
-
3
-
-
0029765771
-
Demethylation-induced developmental pleiotropy in Arabidopsis
-
Ronemus MJ, Galbiati M, Ticknor C, Chen J, Dellaporta SL (1996) Demethylation-induced developmental pleiotropy in Arabidopsis. Science 273(5275):654-657.
-
(1996)
Science
, vol.273
, Issue.5275
, pp. 654-657
-
-
Ronemus, M.J.1
Galbiati, M.2
Ticknor, C.3
Chen, J.4
Dellaporta, S.L.5
-
4
-
-
84893716683
-
Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis
-
Stroud H, et al. (2014) Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis. Nat Struct Mol Biol 21(1):64-72.
-
(2014)
Nat Struct Mol Biol
, vol.21
, Issue.1
, pp. 64-72
-
-
Stroud, H.1
-
5
-
-
84875741680
-
The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin
-
Zemach A, et al. (2013) The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin. Cell 153(1):193-205.
-
(2013)
Cell
, vol.153
, Issue.1
, pp. 193-205
-
-
Zemach, A.1
-
6
-
-
0037046810
-
Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing
-
Cao X, Jacobsen SE (2002) Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing. Curr Biol 12(13):1138-1144.
-
(2002)
Curr Biol
, vol.12
, Issue.13
, pp. 1138-1144
-
-
Cao, X.1
Jacobsen, S.E.2
-
7
-
-
1442305898
-
RNA silencing genes control de novo DNA methylation
-
Chan SW, et al. (2004) RNA silencing genes control de novo DNA methylation. Science 303(5662):1336.
-
(2004)
Science
, vol.303
, Issue.5662
, pp. 1336
-
-
Chan, S.W.1
-
8
-
-
14844295120
-
RNA polymerase IV directs silencing of endogenous DNA
-
Herr AJ, Jensen MB, Dalmay T, Baulcombe DC (2005) RNA polymerase IV directs silencing of endogenous DNA. Science 308(5718):118-120.
-
(2005)
Science
, vol.308
, Issue.5718
, pp. 118-120
-
-
Herr, A.J.1
Jensen, M.B.2
Dalmay, T.3
Baulcombe, D.C.4
-
9
-
-
84879417659
-
Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1
-
Law JA, et al. (2013) Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. Nature 498(7454):385-389.
-
(2013)
Nature
, vol.498
, Issue.7454
, pp. 385-389
-
-
Law, J.A.1
-
10
-
-
14844302397
-
Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation
-
Onodera Y, et al. (2005) Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation. Cell 120(5):613-622.
-
(2005)
Cell
, vol.120
, Issue.5
, pp. 613-622
-
-
Onodera, Y.1
-
11
-
-
84895897598
-
SRA- and SET-domain-containing proteins link RNA polymerase v occupancy to DNA methylation
-
Johnson LM, et al. (2014) SRA- and SET-domain-containing proteins link RNA polymerase V occupancy to DNA methylation. Nature 507(7490):124-128.
-
(2014)
Nature
, vol.507
, Issue.7490
, pp. 124-128
-
-
Johnson, L.M.1
-
12
-
-
52349089796
-
Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana
-
Bernatavichute YV, Zhang X, Cokus S, Pellegrini M, Jacobsen SE (2008) Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana. PLoS ONE 3(9):e3156.
-
(2008)
PLoS ONE
, vol.3
, Issue.9
-
-
Bernatavichute, Y.V.1
Zhang, X.2
Cokus, S.3
Pellegrini, M.4
Jacobsen, S.E.5
-
13
-
-
40749109894
-
Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning
-
Cokus SJ, et al. (2008) Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning. Nature 452(7184):215-219.
-
(2008)
Nature
, vol.452
, Issue.7184
, pp. 215-219
-
-
Cokus, S.J.1
-
14
-
-
84866981889
-
Dual binding of chromomethylase domains to H3K9me2-containing nucleosomes directs DNA methylation in plants
-
Du J, et al. (2012) Dual binding of chromomethylase domains to H3K9me2-containing nucleosomes directs DNA methylation in plants. Cell 151(1):167-180.
-
(2012)
Cell
, vol.151
, Issue.1
, pp. 167-180
-
-
Du, J.1
-
15
-
-
0037143444
-
Interplay between two epigenetic marks DNA methylation and histone H3 lysine 9 methylation
-
Johnson L, Cao X, Jacobsen S (2002) Interplay between two epigenetic marks. DNA methylation and histone H3 lysine 9 methylation. Curr Biol 12(16):1360-1367.
-
(2002)
Curr Biol
, vol.12
, Issue.16
, pp. 1360-1367
-
-
Johnson, L.1
Cao, X.2
Jacobsen, S.3
-
16
-
-
0041806583
-
Erasure of CpG methylation in Arabidopsis alters patterns of histone H3 methylation in heterochromatin
-
Tariq M, et al. (2003) Erasure of CpG methylation in Arabidopsis alters patterns of histone H3 methylation in heterochromatin. Proc Natl Acad Sci USA 100(15):8823-8827.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.15
, pp. 8823-8827
-
-
Tariq, M.1
-
17
-
-
0034636551
-
Disruption of the plant gene MOM releases transcriptional silencing of methylated genes
-
Amedeo P, Habu Y, Afsar K, Mittelsten Scheid O, Paszkowski J (2000) Disruption of the plant gene MOM releases transcriptional silencing of methylated genes. Nature 405(6783):203-206.
-
(2000)
Nature
, vol.405
, Issue.6783
, pp. 203-206
-
-
Amedeo, P.1
Habu, Y.2
Afsar, K.3
Mittelsten Scheid, O.4
Paszkowski, J.5
-
18
-
-
74949088965
-
MOM1 and Pol-IV/V interactions regulate the intensity and specificity of transcriptional gene silencing
-
Yokthongwattana C, et al. (2010) MOM1 and Pol-IV/V interactions regulate the intensity and specificity of transcriptional gene silencing. EMBO Journal 29:340-351.
-
(2010)
EMBO Journal
, vol.29
, pp. 340-351
-
-
Yokthongwattana, C.1
-
19
-
-
33751510617
-
Epigenetic regulation of transcription in intermediate heterochromatin
-
Habu Y, et al. (2006) Epigenetic regulation of transcription in intermediate heterochromatin. EMBO Rep 7(12):1279-1284.
-
(2006)
EMBO Rep
, vol.7
, Issue.12
, pp. 1279-1284
-
-
Habu, Y.1
-
20
-
-
0242500970
-
Two means of transcriptional reactivation within heterochromatin
-
Probst AV, Fransz PF, Paszkowski J, Mittelsten Scheid O (2003) Two means of transcriptional reactivation within heterochromatin. Plant J 33(4):743-749.
-
(2003)
Plant J
, vol.33
, Issue.4
, pp. 743-749
-
-
Probst, A.V.1
Fransz, P.F.2
Paszkowski, J.3
Mittelsten Scheid, O.4
-
21
-
-
33751533880
-
MOM1 mediates DNA-methylationindependent silencing of repetitive sequences in Arabidopsis
-
Vaillant I, Schubert I, Tourmente S, Mathieu O (2006) MOM1 mediates DNA-methylationindependent silencing of repetitive sequences in Arabidopsis. EMBO Rep 7(12):1273-1278.
-
(2006)
EMBO Rep
, vol.7
, Issue.12
, pp. 1273-1278
-
-
Vaillant, I.1
Schubert, I.2
Tourmente, S.3
Mathieu, O.4
-
22
-
-
50849086080
-
Divergent evolution of CHD3 proteins resulted in MOM1 refining epigenetic control in vascular plants
-
Caikovski M, et al. (2008) Divergent evolution of CHD3 proteins resulted in MOM1 refining epigenetic control in vascular plants. PLoS Genet 4(8):e1000165.
-
(2008)
PLoS Genet
, vol.4
, Issue.8
-
-
Caikovski, M.1
-
23
-
-
0037109033
-
Two regulatory levels of transcriptional gene silencing in Arabidopsis
-
Mittelsten Scheid O, Probst AV, Afsar K, Paszkowski J (2002) Two regulatory levels of transcriptional gene silencing in Arabidopsis. Proc Natl Acad Sci USA 99(21):13659-13662.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, Issue.21
, pp. 13659-13662
-
-
Mittelsten Scheid, O.1
Probst, A.V.2
Afsar, K.3
Paszkowski, J.4
-
24
-
-
84883258403
-
The stochastic silencing phenotype of Arabidopsis morc6 mutants reveals a role in efficient RNA-directed DNA methylation
-
Brabbs TR, et al. (2013) The stochastic silencing phenotype of Arabidopsis morc6 mutants reveals a role in efficient RNA-directed DNA methylation. Plant J 75(5):836-846.
-
(2013)
Plant J
, vol.75
, Issue.5
, pp. 836-846
-
-
Brabbs, T.R.1
-
25
-
-
84861527038
-
Involvement of a GHKL ATPase in RNA-directed DNA methylation in Arabidopsis thaliana
-
Lorkovic ZJ, Naumann U, Matzke AJ, Matzke M (2012) Involvement of a GHKL ATPase in RNA-directed DNA methylation in Arabidopsis thaliana. Curr Biol 22(10):933-938.
-
(2012)
Curr Biol
, vol.22
, Issue.10
, pp. 933-938
-
-
Lorkovic, Z.J.1
Naumann, U.2
Matzke, A.J.3
Matzke, M.4
-
26
-
-
84862270547
-
MORC family ATPases required for heterochromatin condensation and gene silencing
-
Moissiard G, et al. (2012) MORC family ATPases required for heterochromatin condensation and gene silencing. Science 336(6087):1448-1451.
-
(2012)
Science
, vol.336
, Issue.6087
, pp. 1448-1451
-
-
Moissiard, G.1
-
27
-
-
0032776555
-
New gene family defined by MORC, a nuclear protein required for mouse spermatogenesis
-
Inoue N, et al. (1999) New gene family defined by MORC, a nuclear protein required for mouse spermatogenesis. Hum Mol Genet 8(7):1201-1207.
-
(1999)
Hum Mol Genet
, vol.8
, Issue.7
, pp. 1201-1207
-
-
Inoue, N.1
-
28
-
-
0032564457
-
Identification of morc (microrchidia), a mutation that results in arrest of spermatogenesis at an early meiotic stage in the mouse
-
Watson ML, et al. (1998) Identification of morc (microrchidia), a mutation that results in arrest of spermatogenesis at an early meiotic stage in the mouse. Proc Natl Acad Sci USA 95(24):14361-14366.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, Issue.24
, pp. 14361-14366
-
-
Watson, M.L.1
-
29
-
-
84893464718
-
The compromised recognition of turnip crinkle virus1 subfamily of microrchidia ATPases regulates disease resistance in barley to biotrophic and necrotrophic pathogens
-
Langen G, et al. (2014) The compromised recognition of turnip crinkle virus1 subfamily of microrchidia ATPases regulates disease resistance in barley to biotrophic and necrotrophic pathogens. Plant Physiol 164(2):866-878.
-
(2014)
Plant Physiol
, vol.164
, Issue.2
, pp. 866-878
-
-
Langen, G.1
-
30
-
-
50949099199
-
The involvement of the Arabidopsis CRT1 ATPase family in disease resistance protein-mediated signaling
-
Kang HG, Klessig DF (2008) The involvement of the Arabidopsis CRT1 ATPase family in disease resistance protein-mediated signaling. Plant Signal Behav 3(9):689-690.
-
(2008)
Plant Signal Behav
, vol.3
, Issue.9
, pp. 689-690
-
-
Kang, H.G.1
Klessig, D.F.2
-
31
-
-
38049005962
-
CRT1, an Arabidopsis ATPase that interacts with diverse resistance proteins and modulates disease resistance to turnip crinkle virus
-
Kang HG, Kuhl JC, Kachroo P, Klessig DF (2008) CRT1, an Arabidopsis ATPase that interacts with diverse resistance proteins and modulates disease resistance to turnip crinkle virus. Cell Host Microbe 3(1):48-57.
-
(2008)
Cell Host Microbe
, vol.3
, Issue.1
, pp. 48-57
-
-
Kang, H.G.1
Kuhl, J.C.2
Kachroo, P.3
Klessig, D.F.4
-
32
-
-
77953189367
-
Endosome-associated CRT1 functions early in resistance genemediated defense signaling in Arabidopsis and tobacco
-
Kang HG, et al. (2010) Endosome-associated CRT1 functions early in resistance genemediated defense signaling in Arabidopsis and tobacco. Plant Cell 22(3):918-936.
-
(2010)
Plant Cell
, vol.22
, Issue.3
, pp. 918-936
-
-
Kang, H.G.1
-
33
-
-
84871729499
-
CRT1 is a nuclear-translocated MORC endonuclease that participates in multiple levels of plant immunity
-
Kang HG, et al. (2012) CRT1 is a nuclear-translocated MORC endonuclease that participates in multiple levels of plant immunity. Nat Commun 3:1297.
-
(2012)
Nat Commun
, vol.3
, pp. 1297
-
-
Kang, H.G.1
-
34
-
-
0033985080
-
GHKL, an emergent ATPase/kinase superfamily
-
Dutta R, Inouye M (2000) GHKL, an emergent ATPase/kinase superfamily. Trends Biochem Sci 25(1):24-28.
-
(2000)
Trends Biochem Sci
, vol.25
, Issue.1
, pp. 24-28
-
-
Dutta, R.1
Inouye, M.2
-
35
-
-
84893801023
-
The SET domain proteins SUVH2 and SUVH9 are required for Pol v occupancy at RNA-directed DNA methylation loci
-
Liu ZW, et al. (2014) The SET domain proteins SUVH2 and SUVH9 are required for Pol V occupancy at RNA-directed DNA methylation loci. PLoS Genet 10(1):e1003948.
-
(2014)
PLoS Genet
, vol.10
, Issue.1
-
-
Liu, Z.W.1
-
36
-
-
42649089072
-
A structural-maintenance-of-chromosomes hinge domaincontaining protein is required for RNA-directed DNA methylation
-
Kanno T, et al. (2008) A structural-maintenance-of-chromosomes hinge domaincontaining protein is required for RNA-directed DNA methylation. Nat Genet 40(5): 670-675.
-
(2008)
Nat Genet
, vol.40
, Issue.5
, pp. 670-675
-
-
Kanno, T.1
-
37
-
-
77953129746
-
A protein complex required for polymerase v transcripts and RNA-directed DNA methylation in Arabidopsis
-
Law JA, et al. (2010) A protein complex required for polymerase V transcripts and RNA-directed DNA methylation in Arabidopsis. Curr Biol 20(10):951-956.
-
(2010)
Curr Biol
, vol.20
, Issue.10
, pp. 951-956
-
-
Law, J.A.1
-
38
-
-
84866117758
-
DDR complex facilitates global association of RNA polymerase v to promoters and evolutionarily young transposons
-
Zhong X, et al. (2012) DDR complex facilitates global association of RNA polymerase V to promoters and evolutionarily young transposons. Nat Struct Mol Biol 19(9):870-875.
-
(2012)
Nat Struct Mol Biol
, vol.19
, Issue.9
, pp. 870-875
-
-
Zhong, X.1
-
39
-
-
57149115354
-
SRA-domain proteins required for DRM2-mediated de novo DNA methylation
-
Johnson LM, Law JA, Khattar A, Henderson IR, Jacobsen SE (2008) SRA-domain proteins required for DRM2-mediated de novo DNA methylation. PLoS Genet 4(11):e1000280.
-
(2008)
PLoS Genet
, vol.4
, Issue.11
-
-
Johnson, L.M.1
Law, J.A.2
Khattar, A.3
Henderson, I.R.4
Jacobsen, S.E.5
-
40
-
-
84871235572
-
MORC proteins and epigenetic regulation
-
Lorkovic ZJ (2012) MORC proteins and epigenetic regulation. Plant Signal Behav 7(12): 1561-1565.
-
(2012)
Plant Signal Behav
, vol.7
, Issue.12
, pp. 1561-1565
-
-
Lorkovic, Z.J.1
-
41
-
-
58349111875
-
Amigo hub; Web presence working group amigo: Online access to ontology and annotation data
-
Carbon S, et al.; AmiGO Hub; Web Presence Working Group (2009) AmiGO: Online access to ontology and annotation data. Bioinformatics 25(2):288-289.
-
(2009)
Bioinformatics
, vol.25
, Issue.2
, pp. 288-289
-
-
Carbon, S.1
-
42
-
-
0028797143
-
Chemoperception of microbial signals in plant-cells
-
Boller T (1995) Chemoperception of microbial signals in plant-cells. Annu Rev Plant Physiol 46:189-214.
-
(1995)
Annu Rev Plant Physiol
, vol.46
, pp. 189-214
-
-
Boller, T.1
-
43
-
-
84872614860
-
Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome
-
Stroud H, Greenberg MV, Feng S, Bernatavichute YV, Jacobsen SE (2013) Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome. Cell 152(1-2):352-364.
-
(2013)
Cell
, vol.152
, Issue.1-2
, pp. 352-364
-
-
Stroud, H.1
Greenberg, M.V.2
Feng, S.3
Bernatavichute, Y.V.4
Jacobsen, S.E.5
-
44
-
-
77952563068
-
Condensin and cohesin complexity: The expanding repertoire of functions
-
Wood AJ, Severson AF, Meyer BJ (2010) Condensin and cohesin complexity: The expanding repertoire of functions. Nat Rev Genet 11(6):391-404.
-
(2010)
Nat Rev Genet
, vol.11
, Issue.6
, pp. 391-404
-
-
Wood, A.J.1
Severson, A.F.2
Meyer, B.J.3
|