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Volumn 4, Issue OCT, 2013, Pages

The subtelomeric khipu satellite repeat from Phaseolus vulgaris: Lessons learned from the genome analysis of the andean genotype G19833

Author keywords

Centromere; Common bean; Evolution; FISH; Genome sequencing; Satellite DNA; Subtelomere; Tandem repeat

Indexed keywords


EID: 84901028951     PISSN: None     EISSN: 1664462X     Source Type: Journal    
DOI: 10.3389/fpls.2013.00109     Document Type: Article
Times cited : (22)

References (64)
  • 1
    • 10044278975 scopus 로고    scopus 로고
    • Genomic and cytological analysis of the Y chromosome of Drosophila melanogaster: Telomere-derived sequences at internal regions
    • Abad, J. P., De Pablos, B., Agudo, M., Molina, I., Giovinazzo, G., Martin-Gallardo, A., et al. (2004). Genomic and cytological analysis of the Y chromosome of Drosophila melanogaster: telomere-derived sequences at internal regions. Chromosoma 113, 295-304
    • (2004) Chromosoma , vol.113 , pp. 295-304
    • Abad, J.P.1    de Pablos, B.2    Agudo, M.3    Molina, I.4    Giovinazzo, G.5    Martin-Gallardo, A.6
  • 2
    • 0027504914 scopus 로고
    • Molecular characterization of a maize B-chromosome centric sequence
    • Alfenito, M. R., and Birchler, J. A. (1993). Molecular characterization of a maize B-chromosome centric sequence. Genetics 135, 589-597
    • (1993) Genetics , vol.135 , pp. 589-597
    • Alfenito, M.R.1    Birchler, J.A.2
  • 3
    • 80051762828 scopus 로고    scopus 로고
    • Chromosome identification in the Andean com-mon bean accession G19833 (Phase-olus vulgaris L., Fabaceae)
    • Altrock, S., Fonseca, A., and Pedrosa- Harand, A. (2011). Chromosome identification in the Andean com-mon bean accession G19833 (Phase-olus vulgaris L., Fabaceae). Genet. Mol. Biol. 34, 459-463
    • (2011) Genet. Mol. Biol , vol.34 , pp. 459-463
    • Altrock, S.1    Fonseca, A.2    Pedrosa- harand, A.3
  • 4
    • 33646559573 scopus 로고    scopus 로고
    • Diversity of cen-tromeric repeats in two closely related wild rice species, Oryza officinalis and Oryza rhizomatis
    • Bao, W. D., Zhang, W. L., Yang, Q. Y., Zhang, Y., Han, B., Gu, M. H., et al. (2006). Diversity of cen-tromeric repeats in two closely related wild rice species, Oryza officinalis and Oryza rhizomatis. Mol. Genet. Genomics 275, 421-430
    • (2006) Mol. Genet. Genomics , vol.275 , pp. 421-430
    • Bao, W.D.1    Zhang, W.L.2    Yang, Q.Y.3    Zhang, Y.4    Han, B.5    Gu, M.H.6
  • 5
    • 0028873712 scopus 로고
    • Nuclear-DNA amounts in angiosperms
    • Bennett, M. D., and Leitch, I. J. (1995). Nuclear-DNA amounts in angiosperms. Ann. Bot. 76, 113-176
    • (1995) Ann. Bot , vol.76 , pp. 113-176
    • Bennett, M.D.1    Leitch, I.J.2
  • 6
    • 0030850119 scopus 로고    scopus 로고
    • Nuclear DNA amounts in angiosperms - 583 new estimates
    • Bennett, M. D., and Leitch, I. J. (1997). Nuclear DNA amounts in angiosperms - 583 new estimates. Ann. Bot. 80, 169-196
    • (1997) Ann. Bot , vol.80 , pp. 169-196
    • Bennett, M.D.1    Leitch, I.J.2
  • 8
    • 0029007148 scopus 로고
    • Barley telomeres are associated with 2 different types of satellite DNA sequences
    • Brandes, A., Roder, M. S., and Ganal, M. W. (1995). Barley telomeres are associated with 2 different types of satellite DNA sequences. Chromosome Res. 3, 315-320
    • (1995) Chromosome Res , vol.3 , pp. 315-320
    • Brandes, A.1    Roder, M.S.2    Ganal, M.W.3
  • 10
    • 0030980513 scopus 로고    scopus 로고
    • Isolation and characterization of X chromosome-derived DNA sequences from a dioecious plant Melandrium album
    • Buzek, J., Koutnikova, H., Houben, A., Riha, K., Janousek, B., Siroky, J., et al. (1997). Isolation and characterization of X chromosome-derived DNA sequences from a dioecious plant Melandrium album. Chromo-some Res. 5, 57-65
    • (1997) Chromo-some Res , vol.5 , pp. 57-65
    • Buzek, J.1    Koutnikova, H.2    Houben, A.3    Riha, K.4    Janousek, B.5    Siroky, J.6
  • 11
    • 0031441013 scopus 로고    scopus 로고
    • Two tandemly repeated telomere-associated sequences in Nicotiana plumbaginifolia
    • Chen, C. M., Wang, C. T., Wang, C. J., Ho, C. H., Kao, Y. Y., and Chen, C. C. (1997). Two tandemly repeated telomere-associated sequences in Nicotiana plumbaginifolia. Chromo-some Res. 5, 561-568
    • (1997) Chromo-some Res , vol.5 , pp. 561-568
    • Chen, C.M.1    Wang, C.T.2    Wang, C.J.3    Ho, C.H.4    Kao, Y.Y.5    Chen, C.C.6
  • 12
    • 77955734200 scopus 로고    scopus 로고
    • Specific resis-tances against Pseudomonas syringae effectors AvrB and AvrRpm1 have evolved differently in common bean (Phaseolus vulgaris), soybean (Glycine max), and Arabidopsis thaliana
    • Chen, N. W. G., Sevignac, M., Thareau, V., Magdelenat, G., David, P., Ash-field, T., et al. (2010). Specific resis-tances against Pseudomonas syringae effectors AvrB and AvrRpm1 have evolved differently in common bean (Phaseolus vulgaris), soybean (Glycine max), and Arabidopsis thaliana. New Phytol. 187, 941-956
    • (2010) New Phytol , vol.187 , pp. 941-956
    • Chen, N.W.G.1    Sevignac, M.2    Thareau, V.3    Magdelenat, G.4    David, P.5    Ash-Field, T.6
  • 13
    • 0035026254 scopus 로고    scopus 로고
    • A tandemly repeatedDNAsequence is associated with both knob-like heterochro-matin and a highly decondensed structure in the meiotic pachytene chromosomes of rice
    • Cheng, Z. K., Stupar, R. M., Gu, M. H., and Jiang, J. M. (2001). A tandemly repeatedDNAsequence is associated with both knob-like heterochro-matin and a highly decondensed structure in the meiotic pachytene chromosomes of rice. Chromosoma 110, 24-31
    • (2001) Chromosoma , vol.110 , pp. 24-31
    • Cheng, Z.K.1    Stupar, R.M.2    Gu, M.H.3    Jiang, J.M.4
  • 15
    • 3543051830 scopus 로고    scopus 로고
    • Mauve: Multiple alignment of conserved genomic sequence with rearrangements
    • Darling, A. C. E., Mau, B., Blattner, F. R., and Perna, N. T. (2004). Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res. 14, 1394-1403
    • (2004) Genome Res , vol.14 , pp. 1394-1403
    • Darling, A.C.E.1    Mau, B.2    Blattner, F.R.3    Perna, N.T.4
  • 17
    • 33846422688 scopus 로고    scopus 로고
    • Molecular organization of terminal repetitive DNA in Beta species
    • Dechyeva, D., and Schmidt, T. (2006). Molecular organization of terminal repetitive DNA in Beta species. Chromosome Res. 14, 881-897
    • (2006) Chromosome Res , vol.14 , pp. 881-897
    • Dechyeva, D.1    Schmidt, T.2
  • 18
    • 33749086511 scopus 로고    scopus 로고
    • Hidden Markov models and genome sequence analysis
    • Eddy, S. R. (1998). Hidden Markov models and genome sequence analysis. FASEB J. 12, A1327-A1327
    • (1998) FASEB J , vol.12
    • Eddy, S.R.1
  • 19
    • 13244255415 scopus 로고    scopus 로고
    • MUSCLE: A multiple sequence alignment method with reduced time and space complexity
    • doi:10.1186/1471-2105-5-113
    • Edgar, R. C. (2004a). MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5:113. doi:10.1186/1471-2105-5-113
    • (2004) BMC Bioinformatics , vol.5 , pp. 113
    • Edgar, R.C.1
  • 20
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar, R. C. (2004b). MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32, 1792-1797
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 21
    • 0000122573 scopus 로고
    • PHYLIP - Phylogeny Inference Package (Version 3.2)
    • Felsenstein, J. (1989). PHYLIP - Phylogeny Inference Package (Version 3.2). Cladistics 5, 164-166
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 23
    • 0034603206 scopus 로고    scopus 로고
    • Integrated cytogenetic map of chromo-some arm 4S of A-thaliana: A structural organization of heterochromatic knob and centromere region
    • Fransz, P. F., Armstrong, S., De Jong, J. H., Parnell, L. D., Van Drunen, G., Dean, C., et al. (2000). Integrated cytogenetic map of chromo-some arm 4S of A-thaliana: a structural organization of heterochromatic knob and centromere region. Cell 100, 367-376
    • (2000) Cell , vol.100 , pp. 367-376
    • Fransz, P.F.1    Armstrong, S.2    de Jong, J.H.3    Parnell, L.D.4    van Drunen, G.5    Dean, C.6
  • 24
    • 0034718886 scopus 로고    scopus 로고
    • Frequent ectopic recombination of virulence factor genes in telomeric chromosome clusters of P-falciparum
    • Freitas-Junior, L. H., Bottius, E., Pirrit, L. A., Deitsch, K. W., Scheidig, C., Guinet, F., et al. (2000). Frequent ectopic recombination of virulence factor genes in telomeric chromosome clusters of P-falciparum. Nature 407, 1018-1022
    • (2000) Nature , vol.407 , pp. 1018-1022
    • Freitas-Junior, L.H.1    Bottius, E.2    Pirrit, L.A.3    Deitsch, K.W.4    Scheidig, C.5    Guinet, F.6
  • 25
    • 20144389331 scopus 로고    scopus 로고
    • Telomeric heterochromatin propagation and histone acetylation control mutually exclusive expression of antigenic variation genes in malaria parasites
    • Freitas-Junior, L. H., Hernandez-Rivas, R., Ralph, S. A., Montiel-Condado, D., Ruvalcaba-Salazar, O. K., Rojas-Meza, A. P., et al. (2005). Telomeric heterochromatin propagation and histone acetylation control mutually exclusive expression of antigenic variation genes in malaria parasites. Cell 121, 25-36
    • (2005) Cell , vol.121 , pp. 25-36
    • Freitas-Junior, L.H.1    Hernandez-Rivas, R.2    Ralph, S.A.3    Montiel-Condado, D.4    Ruvalcaba-Salazar, O.K.5    Rojas-Meza, A.P.6
  • 26
    • 62449248419 scopus 로고    scopus 로고
    • Molecular analysis of a large subtelomeric Nucleotide-Binding-Site- Leucine-Rich-Repeat family in two representative genotypes of the major gene pools of Phaseolus vulgaris
    • Geffroy, V., Macadre, C., David, P., Pedrosa-Harand, A., Sevignac, M., Dauga, C., et al. (2009). Molecular analysis of a large subtelomeric Nucleotide-Binding-Site- Leucine-Rich-Repeat family in two representative genotypes of the major gene pools of Phaseolus vulgaris. Genetics 181, 405-419
    • (2009) Genetics , vol.181 , pp. 405-419
    • Geffroy, V.1    Macadre, C.2    David, P.3    Pedrosa-Harand, A.4    Sevignac, M.5    Dauga, C.6
  • 27
    • 33750330007 scopus 로고    scopus 로고
    • The high variability of subtelomeric heterochromatin and connections between nonho-mologous chromosomes, suggest frequent ectopic recombination in rye meiocytes
    • Gonzalez-Garcia, M., Gonzalez- Sanchez, M., and Puertas, M. J. (2006). The high variability of subtelomeric heterochromatin and connections between nonho-mologous chromosomes, suggest frequent ectopic recombination in rye meiocytes. Cytogenet. Genome Res. 115, 179-185
    • (2006) Cytogenet. Genome Res , vol.115 , pp. 179-185
    • Gonzalez-Garcia, M.1    Gonzalez-Sanchez, M.2    Puertas, M.J.3
  • 28
    • 84875208960 scopus 로고    scopus 로고
    • Interstitial telomeric repeats are enriched in the centromeres of chromosomes in Solanum species
    • He, L., Liu, J., Torres, G. A., Zhang, H., Jiang, J., and Xie, C. (2013). Interstitial telomeric repeats are enriched in the centromeres of chromosomes in Solanum species. Chromosome Res. 21, 5-13
    • (2013) Chromosome Res , vol.21 , pp. 5-13
    • He, L.1    Liu, J.2    Torres, G.A.3    Zhang, H.4    Jiang, J.5    Xie, C.6
  • 29
    • 3042598668 scopus 로고    scopus 로고
    • Molecular analysis of telomere fusions in Arabidopsis: Multiple pathways for chromosome end-joining
    • Heacock, M., Spangler, E., Riha, K., Puizina, J., and Shippen, D. E. (2004).Molecular analysis of telomere fusions in Arabidopsis: multiple pathways for chromosome end-joining. EMBO J. 23, 2304-2313
    • (2004) EMBO J , vol.23 , pp. 2304-2313
    • Heacock, M.1    Spangler, E.2    Riha, K.3    Puizina, J.4    Shippen, D.E.5
  • 30
    • 57749105200 scopus 로고    scopus 로고
    • Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean
    • Innes, R. W., Ameline-Torregrosa, C., Ashfield, T., Cannon, E., Cannon, S. B., Chacko, B., et al. (2008).Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean. Plant Physiol. 148, 1740-1759
    • (2008) Plant Physiol , vol.148 , pp. 1740-1759
    • Innes, R.W.1    Ameline-Torregrosa, C.2    Ashfield, T.3    Cannon, E.4    Cannon, S.B.5    Chacko, B.6
  • 32
    • 23844553603 scopus 로고    scopus 로고
    • Molecular and functional dissection of the maizeBchromosome centromere
    • Jin, W. W., Lamb, J. C., Vega, J. M., Dawe, R. K., Birchler, J. A., and Jiang, J. (2005).Molecular and functional dissection of the maizeBchromosome centromere. Plant Cell 17, 1412-1423
    • (2005) Plant Cell , vol.17 , pp. 1412-1423
    • Jin, W.W.1    Lamb, J.C.2    Vega, J.M.3    Dawe, R.K.4    Birchler, J.A.5    Jiang, J.6
  • 33
    • 0027198355 scopus 로고
    • Characterization of the Nicotiana tabacum L. genome by molecular cytogenetics
    • Kenton, A., Parokonny, A. S., Gleba, Y.Y., and Bennett, M. D. (1993). Characterization of the Nicotiana tabacum L. genome by molecular cytogenetics. AIDSRes.Hum.Retroviruses 240, 159-169
    • (1993) AIDSRes.Hum.Retroviruses , vol.240 , pp. 159-169
    • Kenton, A.1    Parokonny, A.S.2    Gleba, Y.Y.3    Bennett, M.D.4
  • 34
    • 33744458767 scopus 로고    scopus 로고
    • Natural variation in a subtelomeric region of Arabidopsis: Implications for the genomic dynamics of a chromosome end
    • Kuo, H. F., Olsen, K. M., and Richards, E. J. (2006). Natural variation in a subtelomeric region of Arabidopsis: implications for the genomic dynamics of a chromosome end. Genetics 173, 401-417
    • (2006) Genetics , vol.173 , pp. 401-417
    • Kuo, H.F.1    Olsen, K.M.2    Richards, E.J.3
  • 35
    • 0024958469 scopus 로고
    • Somatic chromosome karyotype of tomato based on in situ hybridization of the TGRI satellite repeat
    • Lapitan, N. L. V., Ganal, M. W., and Tanksley, S.D. (1989). Somatic chromosome karyotype of tomato based on in situ hybridization of the TGRI satellite repeat. Genome 32, 992-998
    • (1989) Genome , vol.32 , pp. 992-998
    • Lapitan, N.L.V.1    Ganal, M.W.2    Tanksley, S.D.3
  • 36
    • 23844434604 scopus 로고    scopus 로고
    • Chromatin immunoprecipitation cloning reveals rapid evolutionary patterns of centromeric DNA in Oryza species
    • Lee, H. R., Zhang, W. L., Langdon, T., Jin, W.W., Yan, H. H., Cheng, Z. K., et al. (2005). Chromatin immunoprecipitation cloning reveals rapid evolutionary patterns of centromeric DNA in Oryza species. Proc. Natl. Acad. Sci. U.S.A. 102, 11793-11798
    • (2005) Proc. Natl. Acad. Sci. U.S.A , vol.102 , pp. 11793-11798
    • Lee, H.R.1    Zhang, W.L.2    Langdon, T.3    Jin, W.W.4    Yan, H.H.5    Cheng, Z.K.6
  • 37
    • 65349084952 scopus 로고    scopus 로고
    • Characterization of a tandemly repeated subtelomeric sequence with inverted telomere repeats in maize
    • Li, J., Yang, F., Zhu, J., He, S., and Li, L. (2009). Characterization of a tandemly repeated subtelomeric sequence with inverted telomere repeats in maize. Genome 52, 286-293
    • (2009) Genome , vol.52 , pp. 286-293
    • Li, J.1    Yang, F.2    Zhu, J.3    He, S.4    Li, L.5
  • 38
    • 24344442909 scopus 로고    scopus 로고
    • Human subtelomeres are hot spots of inter-chromosomal recombination and segmental duplication
    • Linardopoulou, E. V., Williams, E. M., Fan, Y. X., Friedman, C., Young, J. M., and Trask, B. J. (2005). Human subtelomeres are hot spots of inter-chromosomal recombination and segmental duplication. Nature 437, 94-100
    • (2005) Nature , vol.437 , pp. 94-100
    • Linardopoulou, E.V.1    Williams, E.M.2    Fan, Y.X.3    Friedman, C.4    Young, J.M.5    Trask, B.J.6
  • 39
    • 0029417194 scopus 로고
    • The chromosome ends of Saccharomyces cerevisiae
    • Louis, E. J. (1995). The chromosome ends of Saccharomyces cerevisiae. Yeast 11, 1553-1573
    • (1995) Yeast , vol.11 , pp. 1553-1573
    • Louis, E.J.1
  • 40
    • 32044442068 scopus 로고    scopus 로고
    • Retrotransposon accumulation and satellite amplification mediated by segmental duplication facilitate centromere expansion in rice
    • Ma, J. X., and Jackson, S. A. (2006). Retrotransposon accumulation and satellite amplification mediated by segmental duplication facilitate centromere expansion in rice. Genome Res. 16, 251-259
    • (2006) Genome Res , vol.16 , pp. 251-259
    • Ma, J.X.1    Jackson, S.A.2
  • 41
    • 0033824415 scopus 로고    scopus 로고
    • RDP: Detection of recombination amongst aligned sequences
    • Martin, D., and Rybicki, E. (2000). RDP: detection of recombination amongst aligned sequences. Bioin-formatics 16, 562-563
    • (2000) Bioin-formatics , vol.16 , pp. 562-563
    • Martin, D.1    Rybicki, E.2
  • 42
    • 13144283628 scopus 로고    scopus 로고
    • A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints
    • Martin, D. P., Posada, D., Crandall, K. A., and Williamson, C. (2005a). A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints. AIDS Res. Hum. Retroviruses 21, 98-102
    • (2005) AIDS Res. Hum. Retroviruses , vol.21 , pp. 98-102
    • Martin, D.P.1    Posada, D.2    Crandall, K.A.3    Williamson, C.4
  • 43
    • 13444251528 scopus 로고    scopus 로고
    • RDP2: Recombination detection and analysis from sequence alignments
    • Martin, D. P., Williamson, C., and Posada, D. (2005b). RDP2: recombination detection and analysis from sequence alignments. Bioinformatics 21, 260-262
    • (2005) Bioinformatics , vol.21 , pp. 260-262
    • Martin, D.P.1    Williamson, C.2    Posada, D.3
  • 44
    • 0036244955 scopus 로고    scopus 로고
    • The complex structure and dynamic evolution of human subtelomeres
    • Mefford, H. C., and Trask, B. J. (2002). The complex structure and dynamic evolution of human subtelomeres. Nat. Rev. Genet. 3, 91-102
    • (2002) Nat. Rev. Genet , vol.3 , pp. 91-102
    • Mefford, H.C.1    Trask, B.J.2
  • 45
    • 65549150043 scopus 로고    scopus 로고
    • Novel sequencing strategy for repetitive DNA in a Drosophila BAC clone reveals that the centromeric region of the Y chromosome evolved from a telomere
    • Mendez-Lago, M., Wild, J., White-head, S. L., Tracey, A., De Pablos, B., Rogers, J., et al. (2009). Novel sequencing strategy for repetitive DNA in a Drosophila BAC clone reveals that the centromeric region of the Y chromosome evolved from a telomere. Nucleic Acids Res. 37, 2264-2273
    • (2009) Nucleic Acids Res , vol.37 , pp. 2264-2273
    • Mendez-Lago, M.1    Wild, J.2    White-Head, S.L.3    Tracey, A.4    de Pablos, B.5    Rogers, J.6
  • 46
    • 33646826334 scopus 로고    scopus 로고
    • Sequencing and charac-terization of telomere and subtelom-ere regions in rice chromosomes 1S, 2S, 2L, 6L, 7S, 7L and 8L
    • Mizuno, H., Wu, J. Z., Kanamori, H., Fujisawa, M., Namiki, N., Saji, S., et al. (2006). Sequencing and charac-terization of telomere and subtelom-ere regions in rice chromosomes 1S, 2S, 2L, 6L, 7S, 7L and 8L. Plant J. 46, 206-217
    • (2006) Plant J , vol.46 , pp. 206-217
    • Mizuno, H.1    Wu, J.Z.2    Kanamori, H.3    Fujisawa, M.4    Namiki, N.5    Saji, S.6
  • 47
    • 45849107228 scopus 로고    scopus 로고
    • Characterization of chromosome ends on the basis of the structure of TrsA subtelomeric repeats in rice (Oryza sativa L.)
    • Mizuno, H., Wu, J. Z., Katayose, Y., Kanamori, H., Sasaki, T., and Mat-sumoto, T. (2008). Characterization of chromosome ends on the basis of the structure of TrsA subtelomeric repeats in rice (Oryza sativa L.).Mol. Genet. Genomics 280, 19-24
    • (2008) Mol. Genet. Genomics , vol.280 , pp. 19-24
    • Mizuno, H.1    Wu, J.Z.2    Katayose, Y.3    Kanamori, H.4    Sasaki, T.5    Mat-Sumoto, T.6
  • 48
    • 0031445157 scopus 로고    scopus 로고
    • Visual verification of close disposition between a rice A genomespecific DNA sequence (TrsA) and the telomere sequence
    • Ohmido, N., and Fukui, K. (1997). Visual verification of close disposition between a rice A genomespecific DNA sequence (TrsA) and the telomere sequence. Plant Mol. Biol. 35, 963-968
    • (1997) Plant Mol. Biol , vol.35 , pp. 963-968
    • Ohmido, N.1    Fukui, K.2
  • 49
    • 0015271630 scopus 로고
    • So much "junk" DNA in our genome
    • Ohno, S. (1972). So much "junk" DNA in our genome. Brookhaven Symp. Biol. 23, 366-370
    • (1972) Brookhaven Symp. Biol , vol.23 , pp. 366-370
    • Ohno, S.1
  • 50
    • 0018857680 scopus 로고
    • Selfish DNA: The ultimate parasite
    • Orgel, L. E., and Crick, F. H. C. (1980). Selfish DNA: the ultimate parasite. Nature 284, 604-607
    • (1980) Nature , vol.284 , pp. 604-607
    • Orgel, L.E.1    Crick, F.H.C.2
  • 51
    • 0033590220 scopus 로고    scopus 로고
    • Possible emergence of new geminiviruses by frequent recombination
    • Padidam, M., Sawyer, S., and Fau-quet, C. M. (1999). Possible emergence of new geminiviruses by frequent recombination. Virology 265, 218-225
    • (1999) Virology , vol.265 , pp. 218-225
    • Padidam, M.1    Sawyer, S.2    Fau-Quet, C.M.3
  • 52
    • 0001945867 scopus 로고
    • Anthracnose
    • 2nd Edn, eds H. F. Schwartz, and M. A. Pastor-Corrales (Cali: Centro Inter-nacional de Agricultura Tropical (CIAT
    • Pastor-Corrales, M. A., and Tu, J. C. (1989). "Anthracnose," in Bean Pro-duction Problems in the Tropics, 2nd Edn, eds H. F. Schwartz, and M. A. Pastor-Corrales (Cali: Centro Inter-nacional de Agricultura Tropical (CIAT)), 77-104
    • (1989) Bean Pro-duction Problems In the Tropics , pp. 77-104
    • Pastor-Corrales, M.A.1    Tu, J.C.2
  • 53
    • 67349135213 scopus 로고    scopus 로고
    • Cytogenetic mapping of common bean chromosomes reveals a less compartmentalized small-genome plant species
    • Pedrosa-Harand, A., Kami, J., Gepts, P., Geffroy, V., and Schweizer, D. (2009). Cytogenetic mapping of common bean chromosomes reveals a less compartmentalized small-genome plant species. Chromosome Res. 17, 405-417
    • (2009) Chromosome Res , vol.17 , pp. 405-417
    • Pedrosa-Harand, A.1    Kami, J.2    Gepts, P.3    Geffroy, V.4    Schweizer, D.5
  • 54
    • 38349081152 scopus 로고    scopus 로고
    • Satellite DNAs between selfishness and functionality: Structure, genomics and evolution of tandem repeats in centromeric (hetero)chromatin
    • Plohl, M., Luchetti, A., Mestrovic, N., and Mantovani, B. (2008). Satellite DNAs between selfishness and functionality: structure, genomics and evolution of tandem repeats in centromeric (hetero)chromatin. Gene 409, 72-82
    • (2008) Gene , vol.409 , pp. 72-82
    • Plohl, M.1    Luchetti, A.2    Mestrovic, N.3    Mantovani, B.4
  • 55
    • 0035923699 scopus 로고    scopus 로고
    • Evaluation of methods for detecting recombination from DNA sequences: Computer simulations
    • Posada, D., and Crandall, K. A. (2001). Evaluation of methods for detecting recombination from DNA sequences: computer simulations. Proc. Natl. Acad. Sci. U.S.A. 98, 13757-13762
    • (2001) Proc. Natl. Acad. Sci. U.S.A , vol.98 , pp. 13757-13762
    • Posada, D.1    Crandall, K.A.2
  • 56
    • 77949718257 scopus 로고    scopus 로고
    • FastTree 2-approximately Maximum-Likelihood trees for large alignments
    • doi:10.1371/journal.pone.0009490
    • Price, M. N., Dehal, P. S., and Arkin, A. P. (2010). FastTree 2-approximately Maximum-Likelihood trees for large alignments. PLoS ONE 5:e9490. doi:10.1371/journal.pone.0009490
    • (2010) PLoS ONE , vol.5
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 58
    • 62649158678 scopus 로고    scopus 로고
    • BAC-end Sequence analysis and a draft physical map of the common bean (Phaseolus vul-garis L.) genome
    • Schlueter, J. A., Goicoechea, J. L., Col-lura, K., Gill, N., Lin, J.-Y., Yu, Y., et al. (2008). BAC-end Sequence analysis and a draft physical map of the common bean (Phaseolus vul-garis L.) genome. Trop. Plant Biol. 1, 40-48
    • (2008) Trop. Plant Biol , vol.1 , pp. 40-48
    • Schlueter, J.A.1    Goicoechea, J.L.2    Col-Lura, K.3    Gill, N.4    Lin, J.-Y.5    Yu, Y.6
  • 59
    • 0034879463 scopus 로고    scopus 로고
    • Instability of bacterial artificial chromosome (BAC) clones containing tandemly repeated DNA sequences
    • Song, J. Q., Dong, F. G., Lilly, J.W., Stu-par, R. M., and Jiang, J. M. (2001). Instability of bacterial artificial chromosome (BAC) clones containing tandemly repeated DNA sequences. Genome 44, 463-469
    • (2001) Genome , vol.44 , pp. 463-469
    • Song, J.Q.1    Dong, F.G.2    Lilly, J.W.3    Stu-Par, R.M.4    Jiang, J.M.5
  • 60
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, evolution-ary distance, and maximum parsimony methods
    • Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S. (2011). MEGA5: molecular Evolutionary Genetics Analysis using Maximum Likelihood, evolution-ary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731-2739
    • (2011) Mol. Biol. Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 61
    • 4644307229 scopus 로고    scopus 로고
    • The centromeric regions of potato chromosomes contain megabasesized tandem arrays of telomeresimiliar sequence
    • Tek, A. L., and Jiang, J. M. (2004). The centromeric regions of potato chromosomes contain megabasesized tandem arrays of telomeresimiliar sequence. Chromosoma 113, 77-83
    • (2004) Chromosoma , vol.113 , pp. 77-83
    • Tek, A.L.1    Jiang, J.M.2
  • 62
    • 80655146847 scopus 로고    scopus 로고
    • Organization and evolution of subtelomeric satellite repeats in the potato genome
    • Torres, G. A., Gong, Z. Y., Iovene, M., Hirsch, C. D., Buell, C. R., Bryan, G. J., et al. (2011). Organization and evolution of subtelomeric satellite repeats in the potato genome. G3 (Bethesda) 1, 85-92
    • (2011) G3 (Bethesda) , vol.1 , pp. 85-92
    • Torres, G.A.1    Gong, Z.Y.2    Iovene, M.3    Hirsch, C.D.4    Buell, C.R.5    Bryan, G.J.6
  • 64
    • 0029411298 scopus 로고
    • The large-scale genomic organization of repetitive DNA families at the telomeres of rye chromosomes
    • Vershinin, A. V., Schwarzacher, T., and Heslopharrison, J. S. (1995). The large-scale genomic organization of repetitive DNA families at the telomeres of rye chromosomes. Plant Cell 7, 1823-1833.
    • (1995) Plant Cell , vol.7 , pp. 1823-1833
    • Vershinin, A.V.1    Schwarzacher, T.2    Heslopharrison, J.S.3


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