메뉴 건너뛰기




Volumn 4, Issue JUL, 2013, Pages

Proteomics of rice seed germination

Author keywords

Metabolism; Post translational modification; Proteomics; Rice; Seed germination

Indexed keywords


EID: 84900802194     PISSN: None     EISSN: 1664462X     Source Type: Journal    
DOI: 10.3389/fpls.2013.00246     Document Type: Review
Times cited : (139)

References (63)
  • 1
    • 79955016400 scopus 로고    scopus 로고
    • Plant organelle proteomics: Collaborating for optimal cell function
    • Agrawal, G. K., Bourguignon, J., and Rolland, N. (2011). Plant organelle proteomics: collaborating for optimal cell function. Mass Spectrom. Rev. 30, 772-853.
    • (2011) Mass Spectrom. Rev. , vol.30 , pp. 772-853
    • Agrawal, G.K.1    Bourguignon, J.2    Rolland, N.3
  • 2
    • 33750584869 scopus 로고    scopus 로고
    • Rejuvenating rice proteomics: Facts, challenges, and visions
    • doi: 10.1002/pmic.200600233
    • Agrawal, G. K., Jwa, N. S., Iwahashi, Y., Yonekura, M., Iwahashi, H., and Rakwal, R. (2006). Rejuvenating rice proteomics: facts, challenges, and visions. Proteomics 6, 5549-5576. doi: 10.1002/pmic.200600233
    • (2006) Proteomics , vol.6 , pp. 5549-5576
    • Agrawal, G.K.1    Jwa, N.S.2    Iwahashi, Y.3    Yonekura, M.4    Iwahashi, H.5    Rakwal, R.6
  • 3
    • 61549084035 scopus 로고    scopus 로고
    • Rice proteomics: Ending phase I and the beginning of phase II
    • doi: 10.1002/pmic.200800594
    • Agrawal, G. K., Jwa, N. S., and Rakwal, R. (2009). Rice proteomics: ending phase I and the beginning of phase II. Proteomics 9, 935-963. doi: 10.1002/pmic.200800594
    • (2009) Proteomics , vol.9 , pp. 935-963
    • Agrawal, G.K.1    Jwa, N.S.2    Rakwal, R.3
  • 4
    • 33644848361 scopus 로고    scopus 로고
    • Rice proteomics: A cornerstone for cereal food crop proteomes
    • doi: 10.1002/mas.20056
    • Agrawal, G. K., and Rakwal, R. (2006). Rice proteomics: a cornerstone for cereal food crop proteomes. Mass Spectrom. Rev. 25, 1-53. doi: 10.1002/mas.20056
    • (2006) Mass Spectrom. Rev. , vol.25 , pp. 1-53
    • Agrawal, G.K.1    Rakwal, R.2
  • 5
    • 33846632231 scopus 로고    scopus 로고
    • Excess copper induced physiological and proteomic changes in germinating rice seeds
    • doi: 10.1016/j.chemosphere.2006.10.075
    • Ahsan, N., Lee, D. G., Lee, S. H., Kang, K. Y., Lee, J. J., Kim, P. J., and et al. (2007a). Excess copper induced physiological and proteomic changes in germinating rice seeds. Chemosphere 67, 1182-1193. doi: 10.1016/j.chemosphere.2006.10.075
    • (2007) Chemosphere , vol.67 , pp. 1182-1193
    • Ahsan, N.1    Lee, D.G.2    Lee, S.H.3    Kang, K.Y.4    Lee, J.J.5    Kim, P.J.6
  • 6
    • 34648816506 scopus 로고    scopus 로고
    • Physiological and protein profiles alternation of germinating rice seedlings exposed to acute cadmium toxicity
    • doi: 10.1016/j.crvi.2007.08.001
    • Ahsan, N., Lee, S. H., and Lee, D. G. (2007b). Physiological and protein profiles alternation of germinating rice seedlings exposed to acute cadmium toxicity. C R Biol. 330, 735-746. doi: 10.1016/j.crvi.2007.08.001
    • (2007) C R Biol. , vol.330 , pp. 735-746
    • Ahsan, N.1    Lee, S.H.2    Lee, D.G.3
  • 7
    • 79955013096 scopus 로고    scopus 로고
    • Reboot the system thanks to protein post-translational modifications and proteome diversity: How quiescent seeds restart their metabolism to prepare seedling establishment
    • doi: 10.1002/pmic.201000641
    • Arc, E., Galland, M., Cueff, G., Godin, B., Lounifi, I., Job, D., and et al. (2011). Reboot the system thanks to protein post-translational modifications and proteome diversity: how quiescent seeds restart their metabolism to prepare seedling establishment. Proteomics 11, 1606-1618. doi: 10.1002/pmic.201000641
    • (2011) Proteomics , vol.11 , pp. 1606-1618
    • Arc, E.1    Galland, M.2    Cueff, G.3    Godin, B.4    Lounifi, I.5    Job, D.6
  • 8
    • 0030879977 scopus 로고    scopus 로고
    • Hormonal signaling in cereal aleurone
    • doi: 10.1093/jxb/48.7.1337
    • Bethke, P. C., Schuurink, R., and Jones, R. L. (1997). Hormonal signaling in cereal aleurone. J. Exp. Bot. 48, 1337-1356. doi: 10.1093/jxb/48.7.1337
    • (1997) J. Exp. Bot. , vol.48 , pp. 1337-1356
    • Bethke, P.C.1    Schuurink, R.2    Jones, R.L.3
  • 9
    • 0031420258 scopus 로고    scopus 로고
    • Seed germination and dormancy
    • doi: 10.1105/tpc.9.7.1055
    • Bewley, J. D. (1997). Seed germination and dormancy. Plant Cell 9, 1055-1066. doi: 10.1105/tpc.9.7.1055
    • (1997) Plant Cell , vol.9 , pp. 1055-1066
    • Bewley, J.D.1
  • 10
    • 82355175692 scopus 로고    scopus 로고
    • Arabidopsis seed germination under abiotic stress as a concert of action of phytohormones
    • doi: 10.1089/omi.2011.0082
    • Daszkowska-Golec, A. (2011). Arabidopsis seed germination under abiotic stress as a concert of action of phytohormones. OMICS 15, 763-774. doi: 10.1089/omi.2011.0082
    • (2011) OMICS , vol.15 , pp. 763-774
    • Daszkowska-Golec, A.1
  • 11
    • 77953154379 scopus 로고    scopus 로고
    • Changes in protein expression profiles between a low phytic acid rice (Oryza sativa L. Ssp. japonica) line and its parental line: A proteomic and bioinformatic approach
    • doi: 10.1021/jf904082b
    • Emami, K., Morris, N. J., Cockell, S. J., Golebiowska, G., Shu, Q. Y., and Gatehouse, A. M. (2010). Changes in protein expression profiles between a low phytic acid rice (Oryza sativa L. Ssp. japonica) line and its parental line: a proteomic and bioinformatic approach. J. Agric. Food Chem. 58, 6912-6922. doi: 10.1021/jf904082b
    • (2010) J. Agric. Food Chem. , vol.58 , pp. 6912-6922
    • Emami, K.1    Morris, N.J.2    Cockell, S.J.3    Golebiowska, G.4    Shu, Q.Y.5    Gatehouse, A.M.6
  • 12
    • 57749096176 scopus 로고    scopus 로고
    • Abscisic acid and the pre harvest sprouting in cereals
    • doi: 10.4161/psb.3.12.6606
    • Fang, J., and Chu, C. C. (2008). Abscisic acid and the pre harvest sprouting in cereals. Plant Signal. Beh. 12, 1046-1048. doi: 10.4161/psb.3.12.6606
    • (2008) Plant Signal. Beh. , vol.12 , pp. 1046-1048
    • Fang, J.1    Chu, C.C.2
  • 13
    • 72849124633 scopus 로고    scopus 로고
    • Deciphering the proteomic profile of rice (Oryza sativa) bran: A pilot study
    • doi: 10.1002/elps.200900469
    • Ferrari, F., Fumagalli, M., Profumo, A., Viglio, S., Sala, A., Dolcini, L., and et al. (2009). Deciphering the proteomic profile of rice (Oryza sativa) bran: a pilot study. Electrophoresis 30, 4083-4094. doi: 10.1002/elps.200900469
    • (2009) Electrophoresis , vol.30 , pp. 4083-4094
    • Ferrari, F.1    Fumagalli, M.2    Profumo, A.3    Viglio, S.4    Sala, A.5    Dolcini, L.6
  • 14
    • 84055178593 scopus 로고    scopus 로고
    • Dormancy cycling in Arabidopsis seeds is controlled by seasonally distinct hormone-signaling pathways
    • doi: 10.1073/pnas.1116325108
    • Footitt, S., Douterelo-Soler, I., Clay, H., and Finch-Savage, W. (2011). Dormancy cycling in Arabidopsis seeds is controlled by seasonally distinct hormone-signaling pathways. Proc. Natl. Acad. Sci. U.S.A. 108, 20236-20241. doi: 10.1073/pnas.1116325108
    • (2011) Proc. Natl. Acad. Sci. U.S.A. , vol.108 , pp. 20236-20241
    • Footitt, S.1    Douterelo-Soler, I.2    Clay, H.3    Finch-Savage, W.4
  • 15
    • 0034979861 scopus 로고    scopus 로고
    • Proteomic analysis of Arabidopsis seed germination and priming
    • doi: 10.1104/pp.126.2.835
    • Gallardo, K., Job, C., Groot, S. P. C., Puype, M., Demol, H., Vandekerckhove, J., and et al. (2001). Proteomic analysis of Arabidopsis seed germination and priming. Plant Physiol. 126, 835-848. doi: 10.1104/pp.126.2.835
    • (2001) Plant Physiol. , vol.126 , pp. 835-848
    • Gallardo, K.1    Job, C.2    Groot, S.P.C.3    Puype, M.4    Demol, H.5    Vandekerckhove, J.6
  • 16
    • 57249105494 scopus 로고    scopus 로고
    • Transcriptomic profiling of mature embryo from an elite super-hybrid rice LYP9 and its parental lines
    • Ge, X., Chen, W., Song, S., Wang, W., Hu, S., and Yu, J. (2008). Transcriptomic profiling of mature embryo from an elite super-hybrid rice LYP9 and its parental lines. BMC Plant. Biol. 8, 114.
    • (2008) BMC Plant. Biol. , vol.8 , pp. 114
    • Ge, X.1    Chen, W.2    Song, S.3    Wang, W.4    Hu, S.5    Yu, J.6
  • 17
    • 0037023349 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryza sativa L. ssp. japonica)
    • doi: 10.1126/science.1068275
    • Goff, S. A., Ricke, D., Lan, T. H., and Presting, G. (2002). A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). Science 296, 92-100. doi: 10.1126/science.1068275
    • (2002) Science , vol.296 , pp. 92-100
    • Goff, S.A.1    Ricke, D.2    Lan, T.H.3    Presting, G.4
  • 18
    • 80053516185 scopus 로고    scopus 로고
    • Gene expression profile changes in germinating rice
    • doi: 10.1111/j.1744-7909.2011.01074.x
    • He, D., Han, C., and Yang, P. (2011a). Gene expression profile changes in germinating rice. J. Integr. Plant Biol. 53, 835-844. doi: 10.1111/j.1744-7909.2011.01074.x
    • (2011) J. Integr. Plant Biol. , vol.53 , pp. 835-844
    • He, D.1    Han, C.2    Yang, P.3
  • 19
    • 79959759548 scopus 로고    scopus 로고
    • Constructing the metabolic and regulatory pathways in germinating rice seeds through proteomic approach
    • doi: 10.1002/pmic.201000598
    • He, D., Han, C., Yao, J., Shen, S., and Yang, P. (2011b). Constructing the metabolic and regulatory pathways in germinating rice seeds through proteomic approach. Proteomics 11, 2693-2713. doi: 10.1002/pmic.201000598
    • (2011) Proteomics , vol.11 , pp. 2693-2713
    • He, D.1    Han, C.2    Yao, J.3    Shen, S.4    Yang, P.5
  • 20
    • 79953837880 scopus 로고    scopus 로고
    • OryzaPG-DB: Rice proteome database based on shotgun proteogenomics
    • doi: 10.1186/1471-2229-11-63
    • Helmy, M., Tomita, M., and Ishihama, Y. (2011). OryzaPG-DB: rice proteome database based on shotgun proteogenomics. BMC Plant. Biol. 11, 63. doi: 10.1186/1471-2229-11-63
    • (2011) BMC Plant. Biol. , vol.11 , pp. 63
    • Helmy, M.1    Tomita, M.2    Ishihama, Y.3
  • 21
    • 37849001089 scopus 로고    scopus 로고
    • Post-genomics dissection of seed dormancy and germination
    • doi: 10.1016/j.tplants.2007.11.002
    • Holdsworth, M. J., Finch-Savage, W. E., Grappin, P., and Job, D. (2008). Post-genomics dissection of seed dormancy and germination. Trends Plant Sci. 13, 7-13. doi: 10.1016/j.tplants.2007.11.002
    • (2008) Trends Plant Sci. , vol.13 , pp. 7-13
    • Holdsworth, M.J.1    Finch-Savage, W.E.2    Grappin, P.3    Job, D.4
  • 22
    • 34447538395 scopus 로고    scopus 로고
    • Oxygen initiation of respiration and mitochondrial biogenesis in rice
    • doi: 10.1074/jbc.M609866200
    • Howell, K. A., Cheng, K., Murcha, M. W., Jenkin, L. E., Millar, A. H., and Whelan, J. (2007). Oxygen initiation of respiration and mitochondrial biogenesis in rice. J. Biol. Chem. 282, 15619-15631. doi: 10.1074/jbc.M609866200
    • (2007) J. Biol. Chem. , vol.282 , pp. 15619-15631
    • Howell, K.A.1    Cheng, K.2    Murcha, M.W.3    Jenkin, L.E.4    Millar, A.H.5    Whelan, J.6
  • 23
    • 31044443421 scopus 로고    scopus 로고
    • Ordered assembly of mitochondria during rice germination begins with pro-mitochondrial structures rich in components of the protein import apparatus
    • doi: 10.1007/s11103-005-3688-7
    • Howell, K. A., Millar, A. H., and Whelan, J. (2006). Ordered assembly of mitochondria during rice germination begins with pro-mitochondrial structures rich in components of the protein import apparatus. Plant Mol. Biol. 60, 201-223. doi: 10.1007/s11103-005-3688-7
    • (2006) Plant Mol. Biol. , vol.60 , pp. 201-223
    • Howell, K.A.1    Millar, A.H.2    Whelan, J.3
  • 24
    • 60249086736 scopus 로고    scopus 로고
    • Mapping metabolic and transcript temporal switches during germination in rice highlights specific transcription factors and the role of RNA instability in the germination process
    • doi: 10.1104/pp.108.129874
    • Howell, K. A., Narsai, r., Carroll, A., Ivanova, A., Lohse, M., Usadel, B., and et al. (2009). Mapping metabolic and transcript temporal switches during germination in rice highlights specific transcription factors and the role of RNA instability in the germination process. Plant Physiol. 149, 961-980. doi: 10.1104/pp.108.129874
    • (2009) Plant Physiol. , vol.149 , pp. 961-980
    • Howell, K.A.1    Narsai, R.2    Carroll, A.3    Ivanova, A.4    Lohse, M.5    Usadel, B.6
  • 25
    • 80055100216 scopus 로고    scopus 로고
    • Reduction of seed-specific dehydrins reduces seed longevity in Arabidopsis thaliana
    • doi: 10.1017/S0960258511000079
    • Hundertmark, M., Buitink, J., Leprince, O., and Hincha, D. K. (2011). Reduction of seed-specific dehydrins reduces seed longevity in Arabidopsis thaliana. Seed Sci. Res. 21, 165-173. doi: 10.1017/S0960258511000079
    • (2011) Seed Sci. Res. , vol.21 , pp. 165-173
    • Hundertmark, M.1    Buitink, J.2    Leprince, O.3    Hincha, D.K.4
  • 27
    • 0001488262 scopus 로고
    • Protein synthesis patterns: Relevance of old and new messenger RNA in germinating maize embryos
    • doi: 10.1104/pp.75.1.231
    • Jime'nez, S., and Aguilar, R. (1984). Protein synthesis patterns: relevance of old and new messenger RNA in germinating maize embryos. Plant Physiol. 75, 231-234. doi: 10.1104/pp.75.1.231
    • (1984) Plant Physiol. , vol.75 , pp. 231-234
    • Jime'nez, S.1    Aguilar, R.2
  • 28
    • 26944480801 scopus 로고    scopus 로고
    • Patterns of protein oxidation in Arabidopsis seeds and during germination
    • doi: 10.1104/pp.105.062778
    • Job, C., Rajjou, L., Lovigny, Y., Belghazi, M., and Job, D. (2005). Patterns of protein oxidation in Arabidopsis seeds and during germination. Plant Physiol. 138, 790-802. doi: 10.1104/pp.105.062778
    • (2005) Plant Physiol. , vol.138 , pp. 790-802
    • Job, C.1    Rajjou, L.2    Lovigny, Y.3    Belghazi, M.4    Job, D.5
  • 29
    • 52649119785 scopus 로고    scopus 로고
    • Analysis of embryonic proteome modulation by GA and ABA from germinating rice seeds
    • doi: 10.1002/pmic.200800183
    • Kim, S. T., Kang, S. Y., Wang, Y., Kim, S. G., Hwang Du, H., and Kang, K. Y. (2008a). Analysis of embryonic proteome modulation by GA and ABA from germinating rice seeds. Proteomics 8, 3577-3587. doi: 10.1002/pmic.200800183
    • (2008) Proteomics , vol.8 , pp. 3577-3587
    • Kim, S.T.1    Kang, S.Y.2    Wang, Y.3    Kim, S.G.4    Hwang Du, H.5    Kang, K.Y.6
  • 30
    • 45549084753 scopus 로고    scopus 로고
    • Proteomics analysis of rice lesion mimic mutant (spl1) reveals tightly localized probenazole-induced protein (PBZ1) in cells undergoing programmed cell death
    • doi: 10.1021/pr700878t
    • Kim, S. T., Kim, S. G., Kang, Y. H., Wang, Y., Kim, J. Y., Yi, N., and et al. (2008b). Proteomics analysis of rice lesion mimic mutant (spl1) reveals tightly localized probenazole-induced protein (PBZ1) in cells undergoing programmed cell death. J. Proteome Res. 7, 1750-1760. doi: 10.1021/pr700878t
    • (2008) J. Proteome Res. , vol.7 , pp. 1750-1760
    • Kim, S.T.1    Kim, S.G.2    Kang, Y.H.3    Wang, Y.4    Kim, J.Y.5    Yi, N.6
  • 31
    • 67650376537 scopus 로고    scopus 로고
    • Developing rice embryo proteomics reveals essential role for embryonic proteins in regulation of seed germination
    • doi: 10.1021/pr900358s
    • Kim, S. T., Wang, Y., Kang, S. Y., Kim, S. G., Rakwal, R., Kim, Y. C., and et al. (2009). Developing rice embryo proteomics reveals essential role for embryonic proteins in regulation of seed germination. J. Proteome Res. 8, 3598-3605. doi: 10.1021/pr900358s
    • (2009) J. Proteome Res. , vol.8 , pp. 3598-3605
    • Kim, S.T.1    Wang, Y.2    Kang, S.Y.3    Kim, S.G.4    Rakwal, R.5    Kim, Y.C.6
  • 32
    • 26444456004 scopus 로고    scopus 로고
    • Rice proteome database: A step toward functional analysis of the rice genome
    • doi: 10.1007/s11103-005-2160-z
    • Komatsu, S. (2005). Rice proteome database: a step toward functional analysis of the rice genome. Plant Mol. Biol. 59, 179-190. doi: 10.1007/s11103-005-2160-z
    • (2005) Plant Mol. Biol. , vol.59 , pp. 179-190
    • Komatsu, S.1
  • 33
    • 27144537491 scopus 로고    scopus 로고
    • Proteomic analysis of rice embryo: An approach for investigating G protein-regulated proteins
    • doi: 10.1002/pmic.200401237
    • Komatsu, S., Abbasi, F., Kobori, E., Fujisawa, Y., Kato, H., and Iwasaki, Y. (2005). Proteomic analysis of rice embryo: an approach for investigating G protein-regulated proteins. Proteomics 5, 3932-3941. doi: 10.1002/pmic.200401237
    • (2005) Proteomics , vol.5 , pp. 3932-3941
    • Komatsu, S.1    Abbasi, F.2    Kobori, E.3    Fujisawa, Y.4    Kato, H.5    Iwasaki, Y.6
  • 34
    • 33750094060 scopus 로고    scopus 로고
    • Review-update and challenges on proteomics in rice
    • doi: 10.1002/pmic.200600012
    • Komatsu, S., and Yano, H. (2006). Review-update and challenges on proteomics in rice. Proteomics 6, 4057-4068. doi: 10.1002/pmic.200600012
    • (2006) Proteomics , vol.6 , pp. 4057-4068
    • Komatsu, S.1    Yano, H.2
  • 35
    • 0141560827 scopus 로고    scopus 로고
    • Rice proteomics: A step towards functional analysis of the rice genome
    • doi: 10.1074/mcp.R200008-MCP200
    • Komatsu, S., Konishi, H., Shen, S., and Yang, G. (2003). Rice proteomics: a step towards functional analysis of the rice genome. Mol. Cell. Proteomics 2, 2-10. doi: 10.1074/mcp.R200008-MCP200
    • (2003) Mol. Cell. Proteomics , vol.2 , pp. 2-10
    • Komatsu, S.1    Konishi, H.2    Shen, S.3    Yang, G.4
  • 36
    • 0038267855 scopus 로고    scopus 로고
    • Structural and histochemical studies on grain-filling in the caryopsis of rice (Oryza sativa L.)
    • doi: 10.1007/BF02705120
    • Krishnan, S., and Dayanandan, P. (2003). Structural and histochemical studies on grain-filling in the caryopsis of rice (Oryza sativa L.). J. Biosci. 28, 455-469. doi: 10.1007/BF02705120
    • (2003) J. Biosci. , vol.28 , pp. 455-469
    • Krishnan, S.1    Dayanandan, P.2
  • 37
    • 47849117424 scopus 로고    scopus 로고
    • Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism
    • doi: 10.1074/mcp.M700535-MCP200
    • Lee, C. P., Eubel, H., O'Toole, N., and Millar, A. H. (2008). Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. Mol. Cell. Proteomics 7, 1297-1316. doi: 10.1074/mcp.M700535-MCP200
    • (2008) Mol. Cell. Proteomics , vol.7 , pp. 1297-1316
    • Lee, C.P.1    Eubel, H.2    O'Toole, N.3    Millar, A.H.4
  • 38
    • 77449150559 scopus 로고    scopus 로고
    • Coordinated responses to oxygen and sugar deficiency allow rice seedlings to tolerate flooding
    • doi: 10.1126/scisignal.2000333
    • Lee, K. W., Chen, P. W., Lu, C. A., Chen, S., Ho, T. H., and Yu, S. M. (2009). Coordinated responses to oxygen and sugar deficiency allow rice seedlings to tolerate flooding. Sci. Signal. 2, 61-69. doi: 10.1126/scisignal.2000333
    • (2009) Sci. Signal. , vol.2 , pp. 61-69
    • Lee, K.W.1    Chen, P.W.2    Lu, C.A.3    Chen, S.4    Ho, T.H.5    Yu, S.M.6
  • 39
    • 24944467388 scopus 로고    scopus 로고
    • Toxicity of arsenate and arsenite on germination seedling growth and amylolytic activity of wheat
    • doi: 10.1016/j.chemosphere.2005.01.088
    • Liu, X., Zhang, S., Shan, X., and Zhu, Y. G. (2005). Toxicity of arsenate and arsenite on germination seedling growth and amylolytic activity of wheat. Chemosphere 61, 293-301. doi: 10.1016/j.chemosphere.2005.01.088
    • (2005) Chemosphere , vol.61 , pp. 293-301
    • Liu, X.1    Zhang, S.2    Shan, X.3    Zhu, Y.G.4
  • 40
    • 0036846024 scopus 로고    scopus 로고
    • ABI5 acts downstream of ABI3 to execute an ABA-dependent growth arrest during germination
    • doi: 10.1046/j.1365-313X.2002.01430.x
    • Lopez-Molina, L., Mongrand, S., McLachlin, D. T., Chait, B. T., and Chua, N. H. (2002). ABI5 acts downstream of ABI3 to execute an ABA-dependent growth arrest during germination. Plant J. 32, 317-328. doi: 10.1046/j.1365-313X.2002.01430.x
    • (2002) Plant J. , vol.32 , pp. 317-328
    • Lopez-Molina, L.1    Mongrand, S.2    McLachlin, D.T.3    Chait, B.T.4    Chua, N.H.5
  • 41
    • 84873988073 scopus 로고    scopus 로고
    • Interplay between protein carbonylation and nitrosylation in plants
    • doi: 10.1002/pmic.201200304
    • Lounifi, I., Arc, E., Molassiotis, A., Job, D., Rajjou, L., and Tanou, G. (2013). Interplay between protein carbonylation and nitrosylation in plants. Proteomics 13, 568-578. doi: 10.1002/pmic.201200304
    • (2013) Proteomics , vol.13 , pp. 568-578
    • Lounifi, I.1    Arc, E.2    Molassiotis, A.3    Job, D.4    Rajjou, L.5    Tanou, G.6
  • 42
    • 41549095905 scopus 로고    scopus 로고
    • Proteomic analysis of RNA-binding proteins in dry seeds of rice after fractionation by ssDNA affinity column chromatography
    • doi: 10.1007/s10529-007-9619-8
    • Masaki, S., Yamada, T., Hirasawa, T., Todaka, D., and Kanekatsu, M. (2008). Proteomic analysis of RNA-binding proteins in dry seeds of rice after fractionation by ssDNA affinity column chromatography. Biotechnol. Lett. 30, 955-960. doi: 10.1007/s10529-007-9619-8
    • (2008) Biotechnol. Lett. , vol.30 , pp. 955-960
    • Masaki, S.1    Yamada, T.2    Hirasawa, T.3    Todaka, D.4    Kanekatsu, M.5
  • 43
    • 0033829419 scopus 로고    scopus 로고
    • Sugar uptake and transport in rice embryo: Expression of companion cell-specific sucrose transporter (OsSUT1) induced by sugar and light
    • doi: 10.1104/pp.124.1.85
    • Matsukura, C., Saitoh, T., Hirose, T., Ohsugi, R., Perata, P., and Yamaguchi, J. (2000). Sugar uptake and transport in rice embryo: expression of companion cell-specific sucrose transporter (OsSUT1) induced by sugar and light. Plant Physiol. 124, 85-93. doi: 10.1104/pp.124.1.85
    • (2000) Plant Physiol. , vol.124 , pp. 85-93
    • Matsukura, C.1    Saitoh, T.2    Hirose, T.3    Ohsugi, R.4    Perata, P.5    Yamaguchi, J.6
  • 44
    • 0000296550 scopus 로고
    • Response to anoxia in rice and wheat seedlings: Changes in the pH of intracellular compartments, glucose-6-phosphate level, and metabolic rate
    • doi: 10.1104/pp.95.3.760
    • Menegus, F., Cattaruzza, L., Mattana, M., Beffagna, N., and Ragg, E. (1991). Response to anoxia in rice and wheat seedlings: changes in the pH of intracellular compartments, glucose-6-phosphate level, and metabolic rate. Plant Physiol. 95, 760-767. doi: 10.1104/pp.95.3.760
    • (1991) Plant Physiol. , vol.95 , pp. 760-767
    • Menegus, F.1    Cattaruzza, L.2    Mattana, M.3    Beffagna, N.4    Ragg, E.5
  • 45
    • 0346665955 scopus 로고    scopus 로고
    • Mapping quantitative trait loci controlling seed longevity in rice (Oryza sativa L.)
    • doi: 10.1007/s00122-002-0872-x
    • Miura, K., Lin, Y., Yano, M., and Nagamine, T. (2002). Mapping quantitative trait loci controlling seed longevity in rice (Oryza sativa L.). Theor. Appl. Genet. 104, 981-986. doi: 10.1007/s00122-002-0872-x
    • (2002) Theor. Appl. Genet. , vol.104 , pp. 981-986
    • Miura, K.1    Lin, Y.2    Yano, M.3    Nagamine, T.4
  • 46
    • 0037343103 scopus 로고    scopus 로고
    • Laser-capture microdissection, a tool for the global analysis of gene expression in specific plant cell types: Identification of genes expressed differentially in epidermal cells or vascular tissues of maize
    • doi: 10.1105/tpc.008102
    • Nakazono, M., Qiu, F., Borsuk, L. A., and Schnable, P. S. (2003). Laser-capture microdissection, a tool for the global analysis of gene expression in specific plant cell types: identification of genes expressed differentially in epidermal cells or vascular tissues of maize. Plant Cell 15, 583-596. doi: 10.1105/tpc.008102
    • (2003) Plant Cell , vol.15 , pp. 583-596
    • Nakazono, M.1    Qiu, F.2    Borsuk, L.A.3    Schnable, P.S.4
  • 47
    • 17844403545 scopus 로고    scopus 로고
    • Role of oxidative carbonylation in protein quality control and senescence
    • doi: 10.1038/sj.emboj.7600599
    • Nystrom, T. (2005). Role of oxidative carbonylation in protein quality control and senescence. EMBO J. 24, 1311-1317. doi: 10.1038/sj.emboj.7600599
    • (2005) EMBO J. , vol.24 , pp. 1311-1317
    • Nystrom, T.1
  • 48
    • 84896689156 scopus 로고    scopus 로고
    • Soybean proteome database 2012: Update on the comprehensive data repository for soybean proteomics
    • doi: 10.3389/fpls.2012.00110
    • Ohyanagi, H., Sakata, K., and Komatsu, S. (2012). Soybean proteome database 2012: update on the comprehensive data repository for soybean proteomics. Front. Plant Sci. 3:110. doi: 10.3389/fpls.2012.00110
    • (2012) Front. Plant Sci. , vol.3 , pp. 110
    • Ohyanagi, H.1    Sakata, K.2    Komatsu, S.3
  • 49
    • 27844432228 scopus 로고    scopus 로고
    • Cold and light control seed germination through the bHLH transcription factor SPATULA
    • doi: 10.1016/j.cub.2005.11.010
    • Penfield, S., Josse, E. M., Kannangara, R., Gilday, A. D., Halliday, K. J., and Graham, I. A. (2005). Cold and light control seed germination through the bHLH transcription factor SPATULA. Curr. Biol. 15, 1998-2006. doi: 10.1016/j.cub.2005.11.010
    • (2005) Curr. Biol. , vol.15 , pp. 1998-2006
    • Penfield, S.1    Josse, E.M.2    Kannangara, R.3    Gilday, A.D.4    Halliday, K.J.5    Graham, I.A.6
  • 50
    • 0030951538 scopus 로고    scopus 로고
    • Mobilization of endosperm reserves in cereal seeds under anoxia
    • doi: 10.1093/oxfordjournals.aob.a010306
    • Perata, P., Guglielminetti, L., and Alpi, A. (1997). Mobilization of endosperm reserves in cereal seeds under anoxia. Ann. Bot. 79, 49-56. doi: 10.1093/oxfordjournals.aob.a010306
    • (1997) Ann. Bot. , vol.79 , pp. 49-56
    • Perata, P.1    Guglielminetti, L.2    Alpi, A.3
  • 51
    • 0000073814 scopus 로고
    • Effect of anoxia on starch breakdown in rice and wheat seeds
    • doi: 10.1007/BF00197056
    • Perata, P., Pozueta-Romero, J., Akazawa, T., and Yamaguchi, J. (1992). Effect of anoxia on starch breakdown in rice and wheat seeds. Planta 188, 611-618. doi: 10.1007/BF00197056
    • (1992) Planta , vol.188 , pp. 611-618
    • Perata, P.1    Pozueta-Romero, J.2    Akazawa, T.3    Yamaguchi, J.4
  • 52
    • 1942469546 scopus 로고    scopus 로고
    • The effect of α-amanitin on the Arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination
    • doi: 10.1104/pp.103.036293
    • Rajjou, L., Gallardo, K., Debeaujon, I. Vandekerckhove, J., Job, C., and Job, D. (2004). The effect of α-amanitin on the Arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination. Plant Physiol. 4, 1598-1613. doi: 10.1104/pp.103.036293
    • (2004) Plant Physiol. , vol.4 , pp. 1598-1613
    • Rajjou, L.1    Gallardo, K.2    Debeaujon, I.3    Vandekerckhove, J.4    Job, C.5    Job, D.6
  • 53
    • 0345058748 scopus 로고    scopus 로고
    • Rice proteomics: Current status and future perspectives
    • doi: 10.1002/elps.200305586
    • Rakwal, R., and Agrawal, G. K. (2003). Rice proteomics: current status and future perspectives. Electrophoresis 24, 3378-3389. doi: 10.1002/elps.200305586
    • (2003) Electrophoresis , vol.24 , pp. 3378-3389
    • Rakwal, R.1    Agrawal, G.K.2
  • 54
    • 84859779921 scopus 로고    scopus 로고
    • Proteomic analysis of embryonic proteins synthesized from long-lived mRNAs during germination of rice seeds
    • doi: 10.1093/pcp/pcs024
    • Sano, N., Permana, H., Kumada, R., Shinozaki, Y., Tanabata, T., Yamada, T., and et al. (2012). Proteomic analysis of embryonic proteins synthesized from long-lived mRNAs during germination of rice seeds. Plant Cell Physiol. 53, 687-698. doi: 10.1093/pcp/pcs024
    • (2012) Plant Cell Physiol. , vol.53 , pp. 687-698
    • Sano, N.1    Permana, H.2    Kumada, R.3    Shinozaki, Y.4    Tanabata, T.5    Yamada, T.6
  • 55
    • 79961185806 scopus 로고    scopus 로고
    • Differential molecular responses of rice and wheat coleoptiles to anoxia reveal novel metabolic adaptations in amino acid metabolism for tissue tolerance
    • doi: 10.1104/pp.111.175570
    • Shingaki-Wells, R. N., Huang, S. B., Taylor, N. L., Carroll, A. J., Zhou, W. X., and Millar, A. H. (2011). Differential molecular responses of rice and wheat coleoptiles to anoxia reveal novel metabolic adaptations in amino acid metabolism for tissue tolerance. Plant Physiol. 156, 1706-1724. doi: 10.1104/pp.111.175570
    • (2011) Plant Physiol. , vol.156 , pp. 1706-1724
    • Shingaki-Wells, R.N.1    Huang, S.B.2    Taylor, N.L.3    Carroll, A.J.4    Zhou, W.X.5    Millar, A.H.6
  • 56
    • 34948864529 scopus 로고    scopus 로고
    • Proteomic analysis of rice (Oryza sativa) seeds during germination
    • doi: 10.1002/pmic.200700207
    • Yang, P., Li, X., Wang, X., Chen, H., Chen, F., and Shen, S. (2007). Proteomic analysis of rice (Oryza sativa) seeds during germination. Proteomics 7, 3358-3368. doi: 10.1002/pmic.200700207
    • (2007) Proteomics , vol.7 , pp. 3358-3368
    • Yang, P.1    Li, X.2    Wang, X.3    Chen, H.4    Chen, F.5    Shen, S.6
  • 57
    • 33748135222 scopus 로고    scopus 로고
    • Comparative analysis of the endosperm proteins separated by 2-D electrophoresis for two cultivars of hybrid rice (Oryza sativa L.)
    • doi: 10.1111/j.1744-7909.2006.00312.x
    • Yang, P., Shen, S. H., and Kuang, T. Y. (2006). Comparative analysis of the endosperm proteins separated by 2-D electrophoresis for two cultivars of hybrid rice (Oryza sativa L.). J. Integr. Plant Biol. 48, 1028-1033. doi: 10.1111/j.1744-7909.2006.00312.x
    • (2006) J. Integr. Plant Biol. , vol.48 , pp. 1028-1033
    • Yang, P.1    Shen, S.H.2    Kuang, T.Y.3
  • 58
    • 31344457323 scopus 로고    scopus 로고
    • Disulfide proteome yields a detailed understanding of redox regulations: A model study of thioredoxin-linked reactions in seed germination
    • doi: 10.1002/pmic.200402033
    • Yano, H., and Masaharu, K. M. (2006). Disulfide proteome yields a detailed understanding of redox regulations: a model study of thioredoxin-linked reactions in seed germination. Proteomics 6, 294-300. doi: 10.1002/pmic.200402033
    • (2006) Proteomics , vol.6 , pp. 294-300
    • Yano, H.1    Masaharu, K.M.2
  • 59
    • 0035836648 scopus 로고    scopus 로고
    • A strategy for the identification of proteins targeted by thioredoxin
    • doi: 10.1073/pnas.071041998
    • Yano, H., Wong, J. H., Lee, Y. M., Cho, M. J., and Buchanan, B. B. (2001). A strategy for the identification of proteins targeted by thioredoxin. Proc. Natl. Acad. Sci. U.S.A. 98, 4794-4799. doi: 10.1073/pnas.071041998
    • (2001) Proc. Natl. Acad. Sci. U.S.A. , vol.98 , pp. 4794-4799
    • Yano, H.1    Wong, J.H.2    Lee, Y.M.3    Cho, M.J.4    Buchanan, B.B.5
  • 60
    • 77957222651 scopus 로고    scopus 로고
    • Modification-specific proteomics in plant biology
    • doi: 10.1016/j.jprot.2010.06.002
    • Ytterberg, A. J., and Jensen, O. N. (2010). Modification-specific proteomics in plant biology. J. Proteomics 73, 2249-2266. doi: 10.1016/j.jprot.2010.06.002
    • (2010) J. Proteomics , vol.73 , pp. 2249-2266
    • Ytterberg, A.J.1    Jensen, O.N.2
  • 61
    • 0037023384 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryza sativa L. ssp. Indica)
    • doi: 10.1126/science.1068037
    • Yu, J., Hu, S. N., Wang, J., and Wong, G. K. (2002). A draft sequence of the rice genome (Oryza sativa L. ssp. Indica). Science 296, 79-92. doi: 10.1126/science.1068037
    • (2002) Science , vol.296 , pp. 79-92
    • Yu, J.1    Hu, S.N.2    Wang, J.3    Wong, G.K.4
  • 62
    • 64949108782 scopus 로고    scopus 로고
    • Proteomic identification of small, copper-responsive proteins in germinating embryos of Oryza sativa
    • doi: 10.1093/aob/mcp012
    • Zhang, H. X., Lian, C. L., and Shen, Z. G. (2009). Proteomic identification of small, copper-responsive proteins in germinating embryos of Oryza sativa. Ann. Bot. 103, 923-930. doi: 10.1093/aob/mcp012
    • (2009) Ann. Bot. , vol.103 , pp. 923-930
    • Zhang, H.X.1    Lian, C.L.2    Shen, Z.G.3
  • 63
    • 33751422323 scopus 로고    scopus 로고
    • Differential analysis of Saccharomyces cerevisiae mitochondria by free flow electrophoresis
    • doi: 10.1074/mcp.T600018-MCP200
    • Zischka, H., Braun, R. J., Marantidis, E. P., Buringer, D., Bornhovd, C., Hauck, S. M., and et al. (2006). Differential analysis of Saccharomyces cerevisiae mitochondria by free flow electrophoresis. Mol. Cell. Proteomics 5, 2185-2200. doi: 10.1074/mcp.T600018-MCP200
    • (2006) Mol. Cell. Proteomics , vol.5 , pp. 2185-2200
    • Zischka, H.1    Braun, R.J.2    Marantidis, E.P.3    Buringer, D.4    Bornhovd, C.5    Hauck, S.M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.