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Volumn 53, Issue 18, 2014, Pages 2993-3003

The sigma enigma: In vitro / in silico site-directed mutagenesis studies unveil σ1 receptor ligand binding

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MEMBRANES; THREE DIMENSIONAL;

EID: 84900532376     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi401575g     Document Type: Article
Times cited : (47)

References (42)
  • 1
    • 0038054062 scopus 로고    scopus 로고
    • Sigma receptors: Potential medications development target for anti-cocaine agents
    • Matsumoto, R. R., Liu, Y., Lerner, M., Howard, E. W., and Brackett, D. J. (2003) Sigma receptors: Potential medications development target for anti-cocaine agents Eur. J. Pharmacol. 469, 1-12
    • (2003) Eur. J. Pharmacol. , vol.469 , pp. 1-12
    • Matsumoto, R.R.1    Liu, Y.2    Lerner, M.3    Howard, E.W.4    Brackett, D.J.5
  • 2
    • 0017064976 scopus 로고
    • The effects of morphine and nalorphine-like drugs in the nondependent and morphine-dependent chronic spinal dog
    • Gilbert, P. E. and Martin, W. R. (1976) The effects of morphine and nalorphine-like drugs in the nondependent and morphine-dependent chronic spinal dog J. Pharmacol. Exp. Ther. 197, 517-532
    • (1976) J. Pharmacol. Exp. Ther. , vol.197 , pp. 517-532
    • Gilbert, P.E.1    Martin, W.R.2
  • 3
    • 0022196308 scopus 로고
    • Phencyclidine and sigma opiate receptors in brain: Biochemical and autoradiographical differentiation
    • Gundlach, A. L., Largent, B. L., and Snyder, S. H. (1985) Phencyclidine and sigma opiate receptors in brain: Biochemical and autoradiographical differentiation Eur. J. Pharmacol. 113, 465-466
    • (1985) Eur. J. Pharmacol. , vol.113 , pp. 465-466
    • Gundlach, A.L.1    Largent, B.L.2    Snyder, S.H.3
  • 4
    • 1942485807 scopus 로고    scopus 로고
    • Sigma-1 receptor ligands: Potential in the treatment of neuropsychiatric disorders
    • Hayashi, T. and Su, T. P. (2004) Sigma-1 receptor ligands: Potential in the treatment of neuropsychiatric disorders CNS Drugs 18, 269-284
    • (2004) CNS Drugs , vol.18 , pp. 269-284
    • Hayashi, T.1    Su, T.P.2
  • 5
    • 60149107790 scopus 로고    scopus 로고
    • The Hallucinogen N,N-Dimethyltryptamine (DMT) Is an Endogenous Sigma-1 Receptor Regulator
    • Fontanilla, D. 2009, The Hallucinogen N,N-Dimethyltryptamine (DMT) Is an Endogenous Sigma-1 Receptor Regulator Science 323, 934-937
    • (2009) Science , vol.323 , pp. 934-937
    • Fontanilla, D.1
  • 6
    • 0029797712 scopus 로고    scopus 로고
    • Purification, molecular cloning, and expression of the mammalian sigma1-binding site
    • Hanner, M. 1996, Purification, molecular cloning, and expression of the mammalian sigma1-binding site Proc. Natl. Acad. Sci. U.S.A. 93, 8072-8077
    • (1996) Proc. Natl. Acad. Sci. U.S.A. , vol.93 , pp. 8072-8077
    • Hanner, M.1
  • 8
    • 70349116879 scopus 로고    scopus 로고
    • The pharmacology of sigma-1 receptors
    • Maurice, T. and Su, T. P. (2009) The pharmacology of sigma-1 receptors Pharmacol. Ther. 124, 195-206
    • (2009) Pharmacol. Ther. , vol.124 , pp. 195-206
    • Maurice, T.1    Su, T.P.2
  • 10
    • 74049130162 scopus 로고    scopus 로고
    • The role of sigma-1 receptors in the pathophysiology of neuropsychiatric diseases
    • Ishikawa, M. and Hashimoto, K. (2010) The role of sigma-1 receptors in the pathophysiology of neuropsychiatric diseases J. Recept., Ligand Channel Res. 3, 25-36
    • (2010) J. Recept., Ligand Channel Res. , vol.3 , pp. 25-36
    • Ishikawa, M.1    Hashimoto, K.2
  • 11
    • 84876567515 scopus 로고    scopus 로고
    • Sigma receptor modulators: A patent review
    • Collina, S. 2013, Sigma receptor modulators: A patent review Expert Opin. Ther. Pat. 23, 597-613
    • (2013) Expert Opin. Ther. Pat. , vol.23 , pp. 597-613
    • Collina, S.1
  • 12
    • 0034886265 scopus 로고    scopus 로고
    • Development of a Tc-99m labeled sigma-2 receptor-specific ligand as a potential breast tumor imaging agent
    • Choi, S. R. 2001, Development of a Tc-99m labeled sigma-2 receptor-specific ligand as a potential breast tumor imaging agent Nucl. Med. Biol. 28, 657-666
    • (2001) Nucl. Med. Biol. , vol.28 , pp. 657-666
    • Choi, S.R.1
  • 13
    • 34447511371 scopus 로고    scopus 로고
    • Fluorine-18-labeled benzamide analogues for imaging the σ2 receptor status of solid tumors with positron emission tomography
    • Tu, Z. 2007, Fluorine-18-labeled benzamide analogues for imaging the σ2 receptor status of solid tumors with positron emission tomography J. Med. Chem. 50, 3194-3204
    • (2007) J. Med. Chem. , vol.50 , pp. 3194-3204
    • Tu, Z.1
  • 14
    • 0027183754 scopus 로고
    • 3H]-(+)-Pentazocine: A potent and highly selective benzomorphan-based probe for sigma-1 receptors
    • 3H]-(+)-Pentazocine: A potent and highly selective benzomorphan-based probe for sigma-1 receptors Mol. Neuropharmacol. 3, 117-126
    • (1993) Mol. Neuropharmacol. , vol.3 , pp. 117-126
    • Bowen, W.D.1
  • 15
    • 0030017401 scopus 로고    scopus 로고
    • NE-100: A novel sigma receptor antagonist
    • Okuyama, S. and Nakazato, A. (1996) NE-100: A novel sigma receptor antagonist CNS Drug Rev. 2, 226-237
    • (1996) CNS Drug Rev. , vol.2 , pp. 226-237
    • Okuyama, S.1    Nakazato, A.2
  • 16
    • 0025714123 scopus 로고
    • 3H]SKF-10,047 binding sites (σ sites) exhibit a unique distribution in rat brain subcellular fractions
    • 3H]SKF-10,047 binding sites (σ sites) exhibit a unique distribution in rat brain subcellular fractions Eur. J. Pharmacol., Mol. Pharmacol. Sect. 188, 211-218
    • (1990) Eur. J. Pharmacol., Mol. Pharmacol. Sect. , vol.188 , pp. 211-218
    • McCann, D.J.1    Su, T.P.2
  • 17
    • 0037171847 scopus 로고    scopus 로고
    • The sigma receptor as a ligand-regulated auxiliary potassium channel subunit
    • Aydar, E., Palmer, C. P., Klyachko, V. A., and Jackson, M. B. (2002) The sigma receptor as a ligand-regulated auxiliary potassium channel subunit Neuron 34, 399-410
    • (2002) Neuron , vol.34 , pp. 399-410
    • Aydar, E.1    Palmer, C.P.2    Klyachko, V.A.3    Jackson, M.B.4
  • 18
    • 0034711953 scopus 로고    scopus 로고
    • The GXXXG motif: A framework for transmembrane helix-helix association
    • Russ, W. P. and Engelman, D. M. (2000) The GXXXG motif: A framework for transmembrane helix-helix association J. Mol. Biol. 296, 911-919
    • (2000) J. Mol. Biol. , vol.296 , pp. 911-919
    • Russ, W.P.1    Engelman, D.M.2
  • 19
    • 0035948580 scopus 로고    scopus 로고
    • Expression pattern of the type 1 sigma receptor in the brain and identity of critical anionic amino acid residues in the ligand-binding domain of the receptor
    • Seth, P. 2001, Expression pattern of the type 1 sigma receptor in the brain and identity of critical anionic amino acid residues in the ligand-binding domain of the receptor Biochim. Biophys. Acta 1540, 59-67
    • (2001) Biochim. Biophys. Acta , vol.1540 , pp. 59-67
    • Seth, P.1
  • 20
    • 0026609682 scopus 로고
    • 125I)iodoazidococaine, a photoaffinity label for the haloperidol-sensitive sigma receptor
    • 125I)iodoazidococaine, a photoaffinity label for the haloperidol-sensitive sigma receptor Proc. Natl. Acad. Sci. U.S.A. 89, 1393-1397
    • (1992) Proc. Natl. Acad. Sci. U.S.A. , vol.89 , pp. 1393-1397
    • Kahoun, J.R.1    Ruoho, A.E.2
  • 21
    • 80955128570 scopus 로고    scopus 로고
    • Homology model and docking-based virtual screening for ligands of the σ1 receptor
    • Laurini, E. 2011, Homology model and docking-based virtual screening for ligands of the σ1 receptor ACS Med. Chem. Lett. 2, 834-839
    • (2011) ACS Med. Chem. Lett. , vol.2 , pp. 834-839
    • Laurini, E.1
  • 22
    • 84868585563 scopus 로고    scopus 로고
    • Another brick in the wall. Validation of the σ1 receptor 3D model by computer-assisted design, synthesis, and activity of new σ1 ligands
    • Laurini, E. 2012, Another brick in the wall. Validation of the σ1 receptor 3D model by computer-assisted design, synthesis, and activity of new σ1 ligands Mol. Pharmaceutics 9, 3107-3126
    • (2012) Mol. Pharmaceutics , vol.9 , pp. 3107-3126
    • Laurini, E.1
  • 23
    • 0033040295 scopus 로고    scopus 로고
    • Amino acid residues in the transmembrane domain of the type 1 sigma receptor critical for ligand binding
    • Yamamoto, H. 1999, Amino acid residues in the transmembrane domain of the type 1 sigma receptor critical for ligand binding FEBS Lett. 445, 19-22
    • (1999) FEBS Lett. , vol.445 , pp. 19-22
    • Yamamoto, H.1
  • 24
    • 37049016678 scopus 로고    scopus 로고
    • Sigma-1 receptors bind cholesterol and remodel lipid rafts in breast cancer cell lines
    • Palmer, C. P., Mahen, R., Schnell, E., Djamgoz, M. B. A., and Aydar, E. (2007) Sigma-1 receptors bind cholesterol and remodel lipid rafts in breast cancer cell lines Cancer Res. 67, 11166-11175
    • (2007) Cancer Res. , vol.67 , pp. 11166-11175
    • Palmer, C.P.1    Mahen, R.2    Schnell, E.3    Djamgoz, M.B.A.4    Aydar, E.5
  • 25
    • 50349088217 scopus 로고    scopus 로고
    • Juxtaposition of the steroid binding domain-like i and II regions constitutes a ligand binding site in the α-1 receptor
    • Pal, A. 2008, Juxtaposition of the steroid binding domain-like I and II regions constitutes a ligand binding site in the α-1 receptor J. Biol. Chem. 283, 19646-19656
    • (2008) J. Biol. Chem. , vol.283 , pp. 19646-19656
    • Pal, A.1
  • 27
    • 0030038849 scopus 로고    scopus 로고
    • Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer
    • Woolf, T. B. and Roux, B. (1996) Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer Proteins 24, 92-114
    • (1996) Proteins , vol.24 , pp. 92-114
    • Woolf, T.B.1    Roux, B.2
  • 28
    • 41149134824 scopus 로고    scopus 로고
    • Automated builder and database of protein/membrane complexes for molecular dynamics simulations
    • Jo, S., Kim, T., and Im, W. (2007) Automated builder and database of protein/membrane complexes for molecular dynamics simulations PLoS One 2, e880
    • (2007) PLoS One , vol.2 , pp. 880
    • Jo, S.1    Kim, T.2    Im, W.3
  • 30
    • 84866397847 scopus 로고    scopus 로고
    • LIPID11: A modular framework for lipid simulations using Amber
    • Skjevik, Å. A., Madej, B. D., Walker, R. C., and Teigen, K. (2012) LIPID11: A modular framework for lipid simulations using Amber J. Phys. Chem. B 116, 11124-11136
    • (2012) J. Phys. Chem. B , vol.116 , pp. 11124-11136
    • Skjevik, Å.A.1    Madej, B.D.2    Walker, R.C.3    Teigen, K.4
  • 31
    • 0242663237 scopus 로고    scopus 로고
    • Point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations
    • Duan, Y. 2003, Point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations J. Comput. Chem. 24, 1999-2012
    • (2003) J. Comput. Chem. , vol.24 , pp. 1999-2012
    • Duan, Y.1
  • 32
    • 84866856929 scopus 로고    scopus 로고
    • 1 receptor
    • 1 receptor J. Med. Chem. 55, 8047-8065
    • (2012) J. Med. Chem. , vol.55 , pp. 8047-8065
    • Meyer, C.1
  • 33
    • 84876671257 scopus 로고    scopus 로고
    • Analysis of the molecular interactions of the potent analgesic S1RA with the σ1 receptor
    • Laurini, E., Dal Col, V., Wünsch, B., and Pricl, S. (2013) Analysis of the molecular interactions of the potent analgesic S1RA with the σ1 receptor Bioorg. Med. Chem. Lett. 23, 2868-2871
    • (2013) Bioorg. Med. Chem. Lett. , vol.23 , pp. 2868-2871
    • Laurini, E.1    Dal Col, V.2    Wünsch, B.3    Pricl, S.4
  • 34
    • 84883051500 scopus 로고    scopus 로고
    • Chemical, Pharmacological, and in vitro Metabolic Stability Studies on Enantiomerically Pure RC-33 Compounds: Promising Neuroprotective Agents Acting as σ1 Receptor Agonists
    • Rossi, D. 2013, Chemical, Pharmacological, and in vitro Metabolic Stability Studies on Enantiomerically Pure RC-33 Compounds: Promising Neuroprotective Agents Acting as σ1 Receptor Agonists ChemMedChem 8, 1514-1527
    • (2013) ChemMedChem , vol.8 , pp. 1514-1527
    • Rossi, D.1
  • 35
    • 84862614975 scopus 로고    scopus 로고
    • University of California, San Francisco.
    • Case, D.-A., (2012) Amber 12, University of California, San Francisco.
    • (2012) Amber 12
    • Case, D.-A.1
  • 36
    • 33646940952 scopus 로고
    • Numerical integration of the cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
    • Ryckaert, J. P., Ciccotti, G., and Berendsen, H. J. C. (1977) Numerical integration of the cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes J. Comput. Phys. 23, 327-341
    • (1977) J. Comput. Phys. , vol.23 , pp. 327-341
    • Ryckaert, J.P.1    Ciccotti, G.2    Berendsen, H.J.C.3
  • 37
    • 0032560959 scopus 로고    scopus 로고
    • Continuum solvent studies of the stability of DNA, RNA and phosphoramidate-DNA helices
    • Srinivasan, J., Cheatham, T. E., III, Cieplak, P., Kollman, P. A., and Case, D. A. (1998) Continuum solvent studies of the stability of DNA, RNA and phosphoramidate-DNA helices J. Am. Chem. Soc. 120, 9401-9409
    • (1998) J. Am. Chem. Soc. , vol.120 , pp. 9401-9409
    • Srinivasan, J.1    Cheatham III, T.E.2    Cieplak, P.3    Kollman, P.A.4    Case, D.A.5
  • 38
    • 84884291937 scopus 로고    scopus 로고
    • Through the open door: Preferential binding of dasatinib to the active form of BCR-ABL unveiled by in silico experiments
    • Laurini, E. 2013, Through the open door: Preferential binding of dasatinib to the active form of BCR-ABL unveiled by in silico experiments Mol. Oncol. 7, 968-975
    • (2013) Mol. Oncol. , vol.7 , pp. 968-975
    • Laurini, E.1
  • 39
    • 20644449471 scopus 로고    scopus 로고
    • Modification of the generalized Born model suitable for macromolecules
    • Onufriev, A., Bashford, D., and Case, D. A. (2000) Modification of the generalized Born model suitable for macromolecules J. Phys. Chem. B 104, 3712-3720
    • (2000) J. Phys. Chem. B , vol.104 , pp. 3712-3720
    • Onufriev, A.1    Bashford, D.2    Case, D.A.3
  • 40
    • 0346971105 scopus 로고    scopus 로고
    • Performance comparison of generalized Born and Poisson methods in the calculation of electrostatic solvation energies for protein structures
    • Feig, M. 2004, Performance comparison of generalized Born and Poisson methods in the calculation of electrostatic solvation energies for protein structures J. Comput. Chem. 25, 265-284
    • (2004) J. Comput. Chem. , vol.25 , pp. 265-284
    • Feig, M.1
  • 41
    • 84900565004 scopus 로고    scopus 로고
    • http://www.esteco.com/home/mode-frontier/mode-frontier.html.
  • 42
    • 84873347175 scopus 로고    scopus 로고
    • Photoaffinity Labeling of the Sigma-1 Receptor with N-[3-(4-Nitrophenyl) propyl]-N-dodecylamine: Evidence of Receptor Dimers
    • Chu, U. M., Ramachandran, S., Hajipour, A. R., and Ruoho, A. E. (2013) Photoaffinity Labeling of the Sigma-1 Receptor with N-[3-(4-Nitrophenyl)propyl]- N-dodecylamine: Evidence of Receptor Dimers Biochemistry 52, 859-868
    • (2013) Biochemistry , vol.52 , pp. 859-868
    • Chu, U.M.1    Ramachandran, S.2    Hajipour, A.R.3    Ruoho, A.E.4


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