Cold-active viruses

Psychrophiles: From Biodiversity to Biotechnology

Volumn , Issue , 2008, Pages 157-173

  Wells, Llyd E ^a  

^a Sterling College   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84900168646     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-3-540-74335-4_10     Document Type: Chapter

References (60)

1. Angly FE, Felts B, Breitbart M, and 15 others (2006) The marine viromes of four oceanic regions. PLOS Biology 4:2121-2131
2. Borriss M, Helmke E, Hanschke R, Schweder T (2003) Isolation and characterization of marine psychrophilic phage-host systems from Arctic sea ice. Extremophiles 7:377-384
3. Castello JD, Rogers SO, Starmer WT, Catranis CM, Ma L, Bachand GD, Zhao Y, Smith JE (1999) Detection of tomato mosaic tobamovirus RNA in ancient glacial ice. Polar Biol 22:207-212
4. Chen PK, Citarella RV, Salazar O, Colwell RR (1966) Properties of two marine bacteriophages. J Bacteriol 91:1136-1139
5. Danovaro R, Serresi M (2000) Viral density and virus-to-bacterium ratio in deep-sea sediments of the Eastern Mediterranean. Appl Environ Microbiol 66:1857-1861
6. Davis BM, Waldor MK (2003) Filamentous phages linked to virulence of Vibrio cholerae. Curr Opin Microbiol 6:35-42
7. Delisle AL, Levin RE (1969a) Bacteriophages of psychrophilic pseudomonads. I. Host range of phage pools active against fish spoilage and fish-pathogenic pseudomonads. Antonie van Leeuwenhoek 35:307-317
8. Delisle AL, Levin RE (1969b) Bacteriophages of psychrophilic pseudomonads. II. Host range of phage active against Pseudomonas putrefaciens. Antonie van Leeuwenhoek 35:318-324
9. Delisle AL, Levin RE (1972a) Characteristics of three phages infectious for psychrophilic fishery isolates of Pseudomonas putrefaciens. Antonie van Leeuwenhoek 38:1-8
10. Delisle AL, Levin RE (1972b) Effect of temperature on an obligately psychrophilic phage-host system of Pseudomonas putrefaciens. Antonie van Leeuwenhoek 38:9-15
11. Edwards RA, Rohwer F (2005) Viral metagenomics. Nat Rev Microbiol 3:504-510
12. Elder AL, Tanner FW (1927) Action of the bacteriophage on a low temperature bacterium. Proc Soc Exper Biol Med 24:645
13. Elder AL, Tanner FW (1928) Action of bacteriophage on psychrophilic organisms. J Infect Dis 43:403-406
14. Filee J, Tetart F, Suttle CA, Krisch HM (2005) Marine T4-type bacteriophages, a ubiquitous component of the dark matter of the biosphere. Proc Natl Acad Sci USA 102:12471-12476
15. Gowing MM (2003) Large viruses and infected microeukaryotes in Ross Sea summer pack ice habitats. Mar Biol 142:1029-1040
16. Gowing MM, Riggs BE, Garrison DL, Gibson AH, Jeffries MO (2002) Large viruses in Ross Sea late autumn pack ice habitats. Mar Ecol Prog Ser 241:1-11
17. Gowing MM, Garrison DL, Gibson AH, Krupp JM, Jeffries MO, Fritsen CH (2004) Bacterial and viral abundance in Ross Sea summer pack ice communities. Mar Ecol Prog Ser 279:3-12
18. Greer GG (1982) Psychrotrophic bacteriophages for beef spoilage pseudomonads. J Food Protection 45:1318-1325
19. Greer GG (1983) Psychrotrophic Brocothrix thermosphacta bacteriophages isolated from beef. Appl Environ Microbiol 46:245-251
20. Guixa-Boixereu N, Vaque D, Gasol JM, Sanchez-Camara J, Pedros-Alio C (2002) Viral distribution and activity in Antarctic waters. Deep-Sea Res II 49:827-845
21. Johnson RM (1968) Characteristics of a marine Vibrio-bacteriophage system. J Arizona Acad Sci 5:28-33
22. Junge K, Krembs C, Deming J, Stierle A and Eicken H (2001) A microscopic approach to investigate bacteria under in situ conditions in sea-ice samples. Ann Glaciol 33:304-310
23. Karner MB, DeLong EF, Karl DM (2001) Archaeal dominance in the mesopelagic zone of the Pacific Ocean. Nature 409:507-510
24. Kulpa CF, Olsen RH (1971) Properties of psychrophilic bacteriophage specific for Micromonas cryophilus. Can J Microbiol 17:157-160
25. Laybourn-Parry J, Marshall WA, Madan NJ (2007) Viral dynamics and patterns of lysogeny in saline Antarctic lakes. Polar Biol 30:351-358
26. Lindell D, Sullivan MB, Johnson ZI, Tolonen AC, Rohwer F, Chisholm SW (2004) Transfer of photosynthesis genes to and from Prochlorococcus viruses. Proc Natl Acad Sci USA 101:11013-11018
27. Lindell D, Jaffe JD, Johnson ZI, Church GM, Chisholm SW (2005) Photosynthesis genes in marine viruses yield proteins during host infection. Nature 438:86-89
28. Lisle JT, Priscu JC (2004) Occurrence of lysogenic bacteria and microbial aggregates in the lakes of the McMurdo Dry Valleys, Antarctica. Microb Ecol 47:427-439
29. Maranger R, Bird DF, Juniper SK (1994) Viral and bacterial dynamics in Arctic sea ice during the spring algal bloom near Resolute, N.W.T., Canada. Mar Ecol Prog Ser 111:121-127
30. Methe BA, Nelson KE, Deming JW, and 24 others (2005) The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analysis. Proc Natl Acad Sci USA 102:10913-10918
31. Middelboe M, Nielsen TG, Bjørnsen PK (2002) Virus and bacterial production in the North Water: In situ measurements, batch-culture experiments and characterization and distribution of a virus-host system. Deep-Sea Res II 49:5063-5079
32. Moak M, Molineaux IJ (2004) Peptidoglycan hydrolytic activities associated with bacteriophage virions. Mol Microbiol 51:1169-1183
33. Moebus K (1983) Lytic and inhibition responses to bacteriophages among marine bacteria, with special reference to the origin of phage-host systems. Helgolander Meeresunters 36:375-391
34. Olsen RH (1967) Isolation and growth of psychrophilic bacteriophage. Appl Microbiol 15:198
35. Olsen RH, Metcalf ES (1968) Conversion of mesophilic to psychrophilic bacteria. Science 162:1288-1289
36. Olsen RH, Metcalf ES, Todd JK (1968) Characteristics of bacteriophages attacking psychrophilic and mesophilic pseudomonads. J Virol 2:357-364
37. Ortmann AC, Suttle CA (2005) High abundances of viruses in a deep-sea hydrothermal vent system indicates viral mediated microbial mortality. Deep-Sea Res I 52:1515-1527
38. Patel TR, Jackman DM (1986) Susceptibility of psychrotrophic pseudomonads of milk origin to psychrotrophic bacteriophages. Appl Environ Microbiol 51:446-448
39. Pearce D, Wilson W (2003) Viruses in Antarctic ecosystems, Antarctic Science 15:319-331
40. Rohwer F, Segall A, Steward G, Seguritan V, Breitbart M, Wolven F, Azam F (2000) The complete genomic sequence of the marine phage Roseophage SIO1 shares homology with nonmarine phages. Limnol Oceanogr 45:408-418
41. Sawstrom C, Anesio MA, Graneli W, Laybourn-Parry J (2007a) Seasonal viral loop dynamics in two large ultraoligotrophic Antarctic freshwater lakes. Microb Ecol 53:1-11
42. Sawstrom C, Graneli W, Laybourn-Parry J, Anesio AM (2007b) High viral infection rates in Antarctic and Arctic bacterioplankton. Environ Microbiol 9:250-255
43. Short CM, Suttle CA (2005) Nearly identical bacteriophage structural gene sequences are widely distributed in both marine and freshwater environments. Appl Environ Microbiol 71:480-486
44. Sillankorva S, Oliveira R, Vieira MJ, Sutherland I, Azeredo J (2004) Pseudomonas fluorescens infection by bacteriophage ?S1: the influence of temperature, host growth phase and media. FEMS Microbiol Lett 241:13-20
45. Spencer R (1955) A marine bacteriophage. Nature 175:690-691
46. Spencer R (1960) Indigenous marine bacteriophages. J Bacteriol 79:614
47. Spencer R (1963) Bacterial viruses in the sea. In: Oppenheimer CH (ed) Symposium on marine microbiology. Thomas, Springfield, IL, pp 350-365
48. Steward GF, Smith DC, Azam F (1996) Abundance and distribution of bacteria and viruses in the Bering and Chukchi Seas. Mar Ecol Prog Ser 131:287-300
49. Steward GF, Montiel JL, Azam F (2000) Genome size distributions indicate variability and similarities among marine viral assemblages from diverse environments. Limnol Oceanogr 45:1697-1706
50. Valentine AF, Chen PK, Colwell RR, Chapman GB (1966) Structure of a marine bacteriophage as revealed by the negative staining technique. J Bacteriol 91:819-822
51. Weinbauer MG, Rassoulzadegan F (2004) Are viruses driving microbial diversification and diversity? Environ Microbiol 6:1-11
52. Weinbauer MG, Brettar I, Hofle MG (2003) Lysogeny and virus-induced mortality of bacterioplankton in surface, deep, and anoxic marine waters. Limnol Oceanogr 48:1457-1465
53. Wells LE (2006) Viral adaptations to life in the cold. PhD dissertation, University of Washington, Seattle, WA, USA
54. Wells LE, Deming JW (2006a) Significance of bacterivory and viral lysis in bottom waters of Franklin Bay, Canadian Arctic, during winter. Aquat Microb Ecol 43:209-221
55. Wells LE, Deming JW (2006b) Characterization of a cold-active bacteriophage on two psychrophilic marine hosts. Aquat Microb Ecol 45:15-29
56. Wells LE, Deming JW (2006c) Modelled and measured dynamics of viruses in Arctic winter seaice brines. Environ Microbiol 8:1115-1121
57. Wells LE, Deming JW (2006d) Effects of temperature, salinity and clay particles on inactivation and decay of cold-active marine Bacteriophage 9A. Aquat Microb Ecol 45:31-39
58. Whitman PA, Marshall RT (1971a) Isolation of psychrophilic bacteriophage-host systems from refrigerated food products. Appl Microbiol 22:220-223
59. Whitman PA, Marshall RT (1971b) Characterization of two psychrophilic Pseudomonas bacteriophages isolated from ground beef. Appl Microbiol 22:463-468
60. Wiebe WJ, Liston J (1968) Isolation and characterization of a marine bacteriophage. Mar Biol 1:244-249