Temporal dynamics and depth variations of dissolved free amino acids and polyamines in coastal seawater determined by high-performance liquid chromatography

Marine Chemistry

Volumn 163, Issue , 2014, Pages 36-44

  Lu, Xinxin ^a   Zou, Long ^b   Clevinger, Curtis ^a   Liu, Qian ^c   Hollibaugh, James T ^c   Mou, Xiaozhen ^a  

^a KENT STATE UNIVERSITY   (United States)

^b UNIVERSITY OF GEORGIA   (United States)

^c UNIVERSITY OF GEORGIA   (United States)

Author keywords

Coastal seawater; Dissolved free amino acids; High performance liquid chromatography; Polyamines; Temporal dynamics

Indexed keywords

AMINO ACID; AMMONIUM COMPOUND; BACTERIUM; CHLOROPHYLL A; CONCENTRATION (COMPOSITION); DIURNAL VARIATION; LIQUID CHROMATOGRAPHY; MARINE ENVIRONMENT; SEASONAL VARIATION; SEAWATER; VERTICAL DISTRIBUTION;

GEORGIA; GRAY'S REEF NATIONAL MARINE SANCTUARY; UNITED STATES;

BACTERIA (MICROORGANISMS);

EID: 84900030297     PISSN: 03044203     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.marchem.2014.04.004     Document Type: Article

References (52)

1. Badini L., Pistocchi R., Bagni N. Polyamine transport in the seaweed Ulva rigida (Chlorophyta). J. Phycol. 1994, 30(4):599-605.
2. Berman T., Bronk D.A. Dissolved organic nitrogen: a dynamic participant in aquatic ecosystems. Aquat. Microb. Ecol. 2003, 31(3):279-305.
3. Bridoux M.C., Ingalls A.E. Structural identification of long-chain polyamines associated with diatom biosilica in a Southern Ocean sediment core. Geochim. Cosmochim. Acta 2010, 74(14):4044-4057.
4. Bridoux M.C., Annenkov V.V., Keil R.G., Ingalls A.E. Widespread distribution and molecular diversity of diatom frustule bound aliphatic long chain polyamines (LCPAs) in marine sediments. Org. Geochem. 2012, 48:9-20.
5. Bridoux M.C., Keil R.G., Ingalls A.E. Analysis of natural diatom communities reveals novel insights into the diversity of long chain polyamine (LCPA) structures involved in silica precipitation. Org. Geochem. 2012, 47:9-21.
6. Bronk D.A., Glibert P.M., Ward B.B. Nitrogen uptake, dissolved organic nitrogen release, and new production. Science 1994, 265(5180):1843-1846.
7. Byun J.A., Lee S.H., Jung B.H., Choi M.H., Moon M.H., Chung B.C. Analysis of polyamines as carbamoyl derivatives in urine and serum by liquid chromatography-tandem mass spectrometry. Biomed. Chromatogr. 2008, 22(1):73-80.
8. Carlucci A.F., Craven D.B., Henrichs S.M. Diel production and microheterotrophic utilization of dissolved free amino acids in waters off Southern California. Appl. Environ. Microbiol. 1984, 48(1):165-170.
9. Chaimbault P., Petritis K., Elfakir C., Dreux M. Determination of 20 underivatized proteinic amino acids by ion-pairing chromatography and pneumatically assisted electrospray mass spectrometry. J. Chromatogr. A 1999, 855(1):191-202.
10. Chaimbault P., Petritis K., Elfakir C., Dreux M. Ion-pair chromatography on a porous graphitic carbon stationary phase for the analysis of twenty underivatized protein amino acids. J. Chromatogr. A 2000, 870(1):245-254.
11. Chau Y.K., Riley J.P. The determination of amino-acids in sea water. Deep-Sea Res. Oceanogr. Abstr. 1966, 13(6):1115-1124.
12. Clarke K.R., Warwick R.M. Change in marine communities: an approach to statistical analysis and interpretation. PRIMER-v5, Plymouth, UK 2001, (2nd) Edition.
13. Clescerl L.S., Greenberg A.E., Eaton A.D. Standard Methods for the Examination of Water and Wastewater 1999, American Public Health Association, Washington, D.C.
14. Crawford C.C., Hobbie J.E., Webb K.L. The utilization of dissolved free amino acids by estuarine microorganisms. Ecology 1974, 55(3):551-563.
15. Curtis-Jackson P.K., Massé G., Gledhill M., Fitzsimons M.F. Characterization of low molecular weight dissolved organic nitrogen by liquid chromatography-electrospray ionization-mass spectrometry. Limnol. Oceanogr.: Methods 2009, 7:52-63.
16. Dawson R., Gocke K. Heterotrophic activity in comparison to free amino-acid concentrations in baltic sea-water samples. Oceanol. Acta. 1978, 1(1):45-54.
17. Dawson R., Liebezeit G. The analytical methods for the characterization of organics in seawater. Mar. Org. Chem. 1981, 31:445-496.
18. Einarsson S. Selective determination of secondary amino acids using precolumn derivatization with 9-fluorenylmethylchloroformate and reversed-phase high-performance liquid chromatography. J. Chromatogr. A 1985, 348:213-220.
19. Fuhrman J.A., Ferguson R.L. Nanomolar concentrations and rapid turnover of dissolved free amino acids in seawater: agreement between chemical and microbiological measurements. Mar. Ecol. Prog. Ser. 1986, 33(10):237-242.
20. Hamana K., Matsuzaki S. Polyamines as a chemotaxonomic marker in bacterial systematics. Crit. Rev. Microbiol. 1992, 18(4):261-283.
21. Hamana K., Sakamoto A., Nishina M., Niitsu M. Cellular polyamine profile of the phyla Dinophyta, Apicomplexa, Ciliophora, Euglenozoa, Cercozoa and Heterokonta. J. Gen. Appl. Microbiol. 2004, 50(5):297-303.
22. Hanczkó R., Korös Á., Tóth F., Molnár-Perl I. Behavior and characteristics of biogenic amines, ornithine and lysine derivatized with o-phthalaldehyde-ethanethiol-fluorenylmethyl chloroformate reagent. J. Chromatogr. A 2005, 1087(1):210-222.
23. Höfle M.G. Degradation of putrescine and cadaverine in seawater cultures by marine bacteria. Appl. Environ. Microbiol. 1984, 47(4):843-849.
24. Holm-Hansen O., Riemann B. Chlorophyll a determination: improvements in methodology. OIKOS 1978, 30(3):438-447.
25. Hou S., He H., Zhang W., Xie H., Zhang X. Determination of soil amino acids by high performance liquid chromatography-electro spray ionization-mass spectrometry derivatized with 6-aminoquinolyl-N-hydroxysuccinimidyl carbamate. Talanta 2009, 80(2):440-447.
26. Johnson L., Lagerkvist S., Lindroth P., Ahnoff M., Martinsson K. Derivatization of secondary amino acids with 7-nitro-4-benzofurazanyl ethers. Anal. Chem. 1982, 54(6):939-942.
27. Jørgensen N.O.G., Kroer N., Coffin R.B., Yang X.H., Lee C. Dissolved free amino acids, combined amino acids, and DNA as sources of carbon and nitrogen to marine bacteria. Mar. Ecol. Prog. Ser. 1993, 98:135-148.
28. Keil R.G., Kirchman D.L. Contribution of dissolved free amino acids and ammonium to the nitrogen requirements of heterotrophic bacterioplankton. Mar. Ecol. Prog. Ser. 1991, 73(1):1-10.
29. Kirchman D.L., Hodson R.E. Metabolic regulation of amino acid uptake in marine waters. Limnol. Oceanogr. 1986, 31(2):339-350.
30. Körös A., Varga Z., Molnar-Perl I. Simultaneous analysis of amino acids and amines as their o-phthalaldehyde-ethanethiol-9-fluorenylmethyl chloroformate derivatives in cheese by high-performance liquid chromatography. J. Chromatogr. A 2008, 1203(2):146-152.
31. Kröger N., Deutzmann R., Bergsdorf C., Sumper M. Species-specific polyamines from diatoms control silica morphology. Proc. Natl. Acad. Sci. U. S. A. 2000, 97(26):14133-14138.
32. Kutlán D., Molnar-Perl I. New aspects of the simultaneous analysis of amino acids and amines as their o-phthaldialdehyde derivatives by high-performance liquid chromatography: analysis of wine, beer and vinegar. J. Chromatogr. A 2003, 987(1):311-322.
33. Lee C., Bada J.L. Amino acids in equatorial Pacific Ocean water. Earth Planet. Sci. Lett. 1975, 26(1):61-68.
34. Lee C., Jørgensen N.O.G. Seasonal cycling of putrescine and amino acids in relation to biological production in a stratified coastal salt pond. Biogeochemistry 1995, 29(2):131-157.
35. Lu Y.H., Hwang D.F. Polyamine profile in the paralytic shellfish poison-producing alga Alexandrium minutum. J. Plankton Res. 2002, 24(3):275-279.
36. Mopper K., Lindroth P. Diel and depth variations in dissolved free amino acids and ammonium in the Baltic Sea determined by shipboard HPLC analysis. Limnol. Oceanogr. 1982, 27(2):336-347.
37. Mou X., Vila-Costa M., Sun S., Zhao W., Sharma S., Moran M.A. Metatranscriptomic signature of exogenous polyamine utilization by coastal bacterioplankton. Environ. Microbiol. Rep. 2011, 3(6):798-806.
38. National Marine Sanctuary Program (NMSP) Gray's Reef National Marine Sanctuary final management plan/final environmental impact statement http://graysreef.noaa.gov/management/pdfs/GraysReefFinalPlan.pdf.
39. Nishibori N., Matuyama Y., Uchida T., Moriyama T., Ogita Y., Oda M., Hirota H. Spatial and temporal variations in free polyamine distributions in Uranouchi Inlet, Japan. Mar. Chem. 2003, 82(3):307-314.
40. Petritis K., Chaimbault P., Elfakir C., Dreux M. Parameter optimization for the analysis of underivatized protein amino acids by liquid chromatography and ionspray tandem mass spectrometry. J. Chromatogr. A 2000, 896(1):253-263.
41. Petritis K., Elfakir C., Dreux M. A comparative study of commercial liquid chromatographic detectors for the analysis of underivatized amino acids. J. Chromatogr. A 2002, 961(1):9-21.
42. Poretsky R.S., Sun S., Mou X., Moran M.A. Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon. Environ. Microbiol. 2010, 12(3):616-627.
43. Porter K.G., Feig Y.S. Use of DAPI for identifying and counting aquatic microflora. Limnol. Oceanogr. 1980, 25:943-948.
44. Qu J., Wang Y., Luo G., Wu Z., Yang C. Validated quantitation of underivatized amino acids in human blood samples by volatile ion-pair reversed-phase liquid chromatography coupled to isotope dilution tandem mass spectrometry. Anal. Chem. 2002, 74(9):2034-2040.
45. R Core Development Team The R project for statistical computing http://www.R-project.org.
46. Rosenstock B., Simon M. Sources and sinks of dissolved free amino acids and protein in a large and deep mesotrophic lake. Limnol. Oceanogr. 2001, 46(3):644-654.
47. Shah A.H., Hameed A., Khan G.M. Fermentative production of L-lysine: bacterial Fermentation-I. J. Med. Sci. 2002, 2(3):152-157.
48. Sowell S.M., Wilhelm L.J., Norbeck A.D., Lipton M.S., Nicora C.D., Barofsky D.F., Giovanonni S.J. Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea. ISME J. 2009, 3(1):93-105.
49. Tabor C.W., Tabor H. Polyamines in microorganisms. Microbiol. Rev. Mar. 1985, 49(1):81-99.
50. Tada K., Tada M., Maita Y. Dissolved free amino acids in coastal seawater using a modified fluorometric method. J. Oceanogr. 1998, 54(4):313-321.
51. Van den Berg C.M.G., Househam B.C., Riley J.P. Determination of cystine and cysteine in seawater using cathodic stripping voltammetry in the presence of Cu (II). J. Electroanal. Chem. Interfacial Electrochem. 1988, 239(1):137-148.
52. Webb K.L., Johannes R.E. Studies of the release of dissolved free amino acids by marine zooplankton. Limnol. Oceanogr. 1967, 12(3):376-382.