-
2
-
-
84867515386
-
The PduQ enzyme is an alcohol dehydrogenase used to recycle NAD(+) internally within the Pdu microcompartment of Salmonella enterica
-
S.Q. Cheng, C.G. Fan, S. Sinha, and T.A. Bobik The PduQ enzyme is an alcohol dehydrogenase used to recycle NAD(+) internally within the Pdu microcompartment of Salmonella enterica PLoS One 7 2012 e47144
-
(2012)
PLoS One
, vol.7
, pp. 47144
-
-
Cheng, S.Q.1
Fan, C.G.2
Sinha, S.3
Bobik, T.A.4
-
3
-
-
84880017088
-
Evidence that a metabolic microcompartment contains and recycles private cofactor pools
-
D.L. Huseby, and J.R. Roth Evidence that a metabolic microcompartment contains and recycles private cofactor pools J Bacteriol 195 2013 2864
-
(2013)
J Bacteriol
, vol.195
, pp. 2864
-
-
Huseby, D.L.1
Roth, J.R.2
-
6
-
-
84875723302
-
Cyanobacterial-based approaches to improving photosynthesis in plants
-
J. Zarzycki, S.D. Axen, J.N. Kinney, and C.A. Kerfeld Cyanobacterial-based approaches to improving photosynthesis in plants J Exp Bot 64 2013 787 798
-
(2013)
J Exp Bot
, vol.64
, pp. 787-798
-
-
Zarzycki, J.1
Axen, S.D.2
Kinney, J.N.3
Kerfeld, C.A.4
-
7
-
-
84861443800
-
Natural strategies for the spatial optimization of metabolism in synthetic biology
-
C.M. Agapakis, P.M. Boyle, and P.A. Silver Natural strategies for the spatial optimization of metabolism in synthetic biology Nat Chem Biol 8 2012 527 535
-
(2012)
Nat Chem Biol
, vol.8
, pp. 527-535
-
-
Agapakis, C.M.1
Boyle, P.M.2
Silver, P.A.3
-
8
-
-
84869875863
-
Designing biological compartmentalization
-
A.H. Chen, and P.A. Silver Designing biological compartmentalization Trends Cell Biol 22 2012 662 670
-
(2012)
Trends Cell Biol
, vol.22
, pp. 662-670
-
-
Chen, A.H.1
Silver, P.A.2
-
9
-
-
79960969172
-
Rationally engineering natural protein assemblies in nanobiotechnology
-
S. Howorka Rationally engineering natural protein assemblies in nanobiotechnology Curr Opin Biotechnol 22 2011 485 491
-
(2011)
Curr Opin Biotechnol
, vol.22
, pp. 485-491
-
-
Howorka, S.1
-
11
-
-
84858077472
-
The Pfam protein families database
-
M. Punta, P.C. Coggill, R.Y. Eberhardt, J. Mistry, J. Tate, and C. Boursnell et al. The Pfam protein families database Nucleic Acids Res 40 2012 D290 D301
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Punta, M.1
Coggill, P.C.2
Eberhardt, R.Y.3
Mistry, J.4
Tate, J.5
Boursnell, C.6
-
12
-
-
78049415865
-
Crystallographic insights into the pore structures and mechanisms of the EutL and EutM shell proteins of the ethanolamine-utilizing microcompartment of Escherichia coli
-
M. Takenoya, K. Nikolakakis, and M. Sagermann Crystallographic insights into the pore structures and mechanisms of the EutL and EutM shell proteins of the ethanolamine-utilizing microcompartment of Escherichia coli J Bacteriol 192 2010 6056 6063
-
(2010)
J Bacteriol
, vol.192
, pp. 6056-6063
-
-
Takenoya, M.1
Nikolakakis, K.2
Sagermann, M.3
-
13
-
-
23244439942
-
Protein structures forming the shell of primitive bacterial organelles
-
C.A. Kerfeld, M.R. Sawaya, S. Tanaka, C.V. Nguyen, M. Phillips, and M. Beeby et al. Protein structures forming the shell of primitive bacterial organelles Science 309 2005 936 938
-
(2005)
Science
, vol.309
, pp. 936-938
-
-
Kerfeld, C.A.1
Sawaya, M.R.2
Tanaka, S.3
Nguyen, C.V.4
Phillips, M.5
Beeby, M.6
-
14
-
-
34250347772
-
Structural analysis of CsoS1A and the protein shell of the Halothiobacillus neapolitanus carboxysome
-
Y. Tsai, M.R. Sawaya, G.C. Cannon, F. Cai, E.B. Williams, and S. Heinhorst et al. Structural analysis of CsoS1A and the protein shell of the Halothiobacillus neapolitanus carboxysome PLoS Biol 5 2007 e144
-
(2007)
PLoS Biol
, vol.5
, pp. 144
-
-
Tsai, Y.1
Sawaya, M.R.2
Cannon, G.C.3
Cai, F.4
Williams, E.B.5
Heinhorst, S.6
-
15
-
-
39749132210
-
Atomic-level models of the bacterial carboxysome shell
-
S. Tanaka, M.R. Sawaya, C.A. Kerfeld, and T.O. Yeates Atomic-level models of the bacterial carboxysome shell Science 319 2008 1083 1086
-
(2008)
Science
, vol.319
, pp. 1083-1086
-
-
Tanaka, S.1
Sawaya, M.R.2
Kerfeld, C.A.3
Yeates, T.O.4
-
16
-
-
74849140487
-
Structure and mechanisms of a protein-based organelle in Escherichia coli
-
S. Tanaka, M.R. Sawaya, and T.O. Yeates Structure and mechanisms of a protein-based organelle in Escherichia coli Science 327 2010 81 84
-
(2010)
Science
, vol.327
, pp. 81-84
-
-
Tanaka, S.1
Sawaya, M.R.2
Yeates, T.O.3
-
17
-
-
0020589050
-
Characterization of a homogeneous preparation of carboxysomes from Thiobacillus neapolitanus
-
G.C. Cannon, and J.M. Shively Characterization of a homogeneous preparation of carboxysomes from Thiobacillus neapolitanus Arch Microbiol 134 1983 52 59
-
(1983)
Arch Microbiol
, vol.134
, pp. 52-59
-
-
Cannon, G.C.1
Shively, J.M.2
-
18
-
-
0042389658
-
12-dependent degradation of 1,2-propanediol in Salmonella enterica serovar typhimurium LT2
-
12-dependent degradation of 1,2-propanediol in Salmonella enterica serovar typhimurium LT2 J Bacteriol 185 2003 5086 5095
-
(2003)
J Bacteriol
, vol.185
, pp. 5086-5095
-
-
Havemann, G.D.1
Bobik, T.A.2
-
19
-
-
84857065808
-
Isolation and characterization of the prochlorococcus carboxysome reveal the presence of the novel shell protein CsoS1D
-
E.W. Roberts, F. Cai, C.A. Kerfeld, G.C. Cannon, and S. Heinhorst Isolation and characterization of the prochlorococcus carboxysome reveal the presence of the novel shell protein CsoS1D J Bacteriol 194 2012 787 795
-
(2012)
J Bacteriol
, vol.194
, pp. 787-795
-
-
Roberts, E.W.1
Cai, F.2
Kerfeld, C.A.3
Cannon, G.C.4
Heinhorst, S.5
-
20
-
-
67049117718
-
Crystal structure of the EutL shell protein of the ethanolamine ammonia lyase microcompartment
-
M. Sagermann, A. Ohtaki, and K. Nikolakakis Crystal structure of the EutL shell protein of the ethanolamine ammonia lyase microcompartment Proc Natl Acad Sci U S A 106 2009 8883 8887
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 8883-8887
-
-
Sagermann, M.1
Ohtaki, A.2
Nikolakakis, K.3
-
21
-
-
70350096554
-
Structure of a trimeric bacterial microcompartment shell protein, EtuB, associated with ethanol utilization in Clostridium kluyveri
-
D. Heldt, S. Frank, A. Seyedarabi, D. Ladakis, J.B. Parsons, and M.J. Warren et al. Structure of a trimeric bacterial microcompartment shell protein, EtuB, associated with ethanol utilization in Clostridium kluyveri Biochem J 423 2009 199 207
-
(2009)
Biochem J
, vol.423
, pp. 199-207
-
-
Heldt, D.1
Frank, S.2
Seyedarabi, A.3
Ladakis, D.4
Parsons, J.B.5
Warren, M.J.6
-
22
-
-
68949220061
-
Identification and structural analysis of a novel carboxysome shell protein with implications for metabolite transport
-
M.G. Klein, P. Zwart, S.C. Bagby, F. Cai, S.W. Chisholm, and S. Heinhorst et al. Identification and structural analysis of a novel carboxysome shell protein with implications for metabolite transport J Mol Biol 392 2009 319 333
-
(2009)
J Mol Biol
, vol.392
, pp. 319-333
-
-
Klein, M.G.1
Zwart, P.2
Bagby, S.C.3
Cai, F.4
Chisholm, S.W.5
Heinhorst, S.6
-
23
-
-
84878391635
-
The structure of CcmP, a tandem bacterial microcompartment domain protein from the β-carboxysome forms a subcompartment within a microcompartment
-
F. Cai, M. Sutter, J.C. Cameron, D.N. Stanley, J.N. Kinney, and C.A. Kerfeld The structure of CcmP, a tandem bacterial microcompartment domain protein from the β-carboxysome forms a subcompartment within a microcompartment J Biol Chem 288 2013 16055 16063
-
(2013)
J Biol Chem
, vol.288
, pp. 16055-16063
-
-
Cai, F.1
Sutter, M.2
Cameron, J.C.3
Stanley, D.N.4
Kinney, J.N.5
Kerfeld, C.A.6
-
24
-
-
84889097184
-
Two new high resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species
-
M. Sutter, S.C. Wilson, S. Deutsch, and C.A. Kerfeld Two new high resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species Photosynth Res 118 2013 9 16
-
(2013)
Photosynth Res
, vol.118
, pp. 9-16
-
-
Sutter, M.1
Wilson, S.C.2
Deutsch, S.3
Kerfeld, C.A.4
-
25
-
-
84856963458
-
Comparative analysis of carboxysome shell proteins
-
J.N. Kinney, S.D. Axen, and C.A. Kerfeld Comparative analysis of carboxysome shell proteins Photosynth Res 109 2011 21 32
-
(2011)
Photosynth Res
, vol.109
, pp. 21-32
-
-
Kinney, J.N.1
Axen, S.D.2
Kerfeld, C.A.3
-
26
-
-
77952945226
-
Bacterial microcompartment organelles: Protein shell structure and evolution
-
T.O. Yeates, C.S. Crowley, and S. Tanaka Bacterial microcompartment organelles: protein shell structure and evolution Annu Rev Biophys 39 2010 185 205
-
(2010)
Annu Rev Biophys
, vol.39
, pp. 185-205
-
-
Yeates, T.O.1
Crowley, C.S.2
Tanaka, S.3
-
27
-
-
84855991265
-
Modularity of a carbon-fixing protein organelle
-
W. Bonacci, P.K. Teng, B. Afonso, H. Niederholtmeyer, P. Grob, and P.A. Silver et al. Modularity of a carbon-fixing protein organelle Proc Natl Acad Sci U S A 109 2012 478 483
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 478-483
-
-
Bonacci, W.1
Teng, P.K.2
Afonso, B.3
Niederholtmeyer, H.4
Grob, P.5
Silver, P.A.6
-
28
-
-
84858009996
-
Engineered protein nano-compartments for targeted enzyme localization
-
S. Choudhary, M.B. Quin, M.A. Sanders, E.T. Johnson, and C. Schmidt-Dannert Engineered protein nano-compartments for targeted enzyme localization PLoS One 7 2012 e33342
-
(2012)
PLoS One
, vol.7
, pp. 33342
-
-
Choudhary, S.1
Quin, M.B.2
Sanders, M.A.3
Johnson, E.T.4
Schmidt-Dannert, C.5
-
29
-
-
77950906711
-
Synthesis of empty bacterial microcompartments, directed organelle protein incorporation, and evidence of filament-associated organelle movement
-
J.B. Parsons, S. Frank, D. Bhella, M. Liang, M.B. Prentice, and D.P. Mulvihill et al. Synthesis of empty bacterial microcompartments, directed organelle protein incorporation, and evidence of filament-associated organelle movement Mol Cell 38 2010 305 315
-
(2010)
Mol Cell
, vol.38
, pp. 305-315
-
-
Parsons, J.B.1
Frank, S.2
Bhella, D.3
Liang, M.4
Prentice, M.B.5
Mulvihill, D.P.6
-
30
-
-
47249117924
-
Biochemical and structural insights into bacterial organelle form and biogenesis
-
J.B. Parsons, S.D. Dinesh, E. Deery, H.K. Leech, A.A. Brindley, and D. Heldt et al. Biochemical and structural insights into bacterial organelle form and biogenesis J Biol Chem 283 2008 14366 14375
-
(2008)
J Biol Chem
, vol.283
, pp. 14366-14375
-
-
Parsons, J.B.1
Dinesh, S.D.2
Deery, E.3
Leech, H.K.4
Brindley, A.A.5
Heldt, D.6
-
31
-
-
84886693636
-
A synthetic system for expression of components of a bacterial microcompartment
-
F. Sargent, F.A. Davidson, C.L. Kelly, R. Binny, N. Christodoulides, and D. Gibson et al. A synthetic system for expression of components of a bacterial microcompartment Microbiology 159 2013 2427 2436
-
(2013)
Microbiology
, vol.159
, pp. 2427-2436
-
-
Sargent, F.1
Davidson, F.A.2
Kelly, C.L.3
Binny, R.4
Christodoulides, N.5
Gibson, D.6
-
32
-
-
78751547656
-
Complete genome sequence of Haliangium ochraceum type strain (SMP-2)
-
N. Ivanova, C. Daum, E. Lang, B. Abt, M. Kopitz, and E. Saunders et al. Complete genome sequence of Haliangium ochraceum type strain (SMP-2) Stand Genomic Sci 2 2010 96 106
-
(2010)
Stand Genomic Sci
, vol.2
, pp. 96-106
-
-
Ivanova, N.1
Daum, C.2
Lang, E.3
Abt, B.4
Kopitz, M.5
Saunders, E.6
-
33
-
-
84861208627
-
Elucidating essential role of conserved carboxysomal protein CcmN reveals common feature of bacterial microcompartment assembly
-
J.N. Kinney, A. Salmeen, F. Cai, and C.A. Kerfeld Elucidating essential role of conserved carboxysomal protein CcmN reveals common feature of bacterial microcompartment assembly J Biol Chem 287 2012 17729 17736
-
(2012)
J Biol Chem
, vol.287
, pp. 17729-17736
-
-
Kinney, J.N.1
Salmeen, A.2
Cai, F.3
Kerfeld, C.A.4
-
34
-
-
84899933284
-
Solution structure of a bacterial microcompartment targeting peptide and its application in the construction of an ethanol bioreactor
-
10.1021/sb4001118
-
A.D. Lawrence, S. Frank, S. Newnham, M.J. Lee, I.R. Brown, and W.-F. Xue et al. Solution structure of a bacterial microcompartment targeting peptide and its application in the construction of an ethanol bioreactor ACS Synth Biol 2014 10.1021/sb4001118
-
(2014)
ACS Synth Biol
-
-
Lawrence, A.D.1
Frank, S.2
Newnham, S.3
Lee, M.J.4
Brown, I.R.5
Xue, W.-F.6
-
35
-
-
0024075956
-
Ethanolamine utilization in Salmonella typhimurium
-
D.M. Roof, and J.R. Roth Ethanolamine utilization in Salmonella typhimurium J Bacteriol 170 1988 3855 3863
-
(1988)
J Bacteriol
, vol.170
, pp. 3855-3863
-
-
Roof, D.M.1
Roth, J.R.2
-
36
-
-
0026503401
-
A single regulatory gene integrates control of vitamin B12 synthesis and propanediol degradation
-
T.A. Bobik, M. Ailon, and J.R. Roth A single regulatory gene integrates control of vitamin B12 synthesis and propanediol degradation J Bacteriol 174 1992 2253
-
(1992)
J Bacteriol
, vol.174
, pp. 2253
-
-
Bobik, T.A.1
Ailon, M.2
Roth, J.R.3
-
37
-
-
84873819450
-
Involvement of a bacterial microcompartment in the metabolism of fucose and rhamnose by Clostridium phytofermentans
-
E. Petit, W.G. LaTouf, M.V. Coppi, T.A. Warnick, D. Currie, and I. Romashko et al. Involvement of a bacterial microcompartment in the metabolism of fucose and rhamnose by Clostridium phytofermentans PLoS One 8 2013 e54337
-
(2013)
PLoS One
, vol.8
, pp. 54337
-
-
Petit, E.1
Latouf, W.G.2
Coppi, M.V.3
Warnick, T.A.4
Currie, D.5
Romashko, I.6
-
38
-
-
84900070956
-
Characterization of a planctomycetal organelle: A novel bacterial microcompartment for the aerobic degradation of plant saccharides
-
[in press]
-
O. Erbilgin, K.L. McDonald, and C.A. Kerfeld Characterization of a planctomycetal organelle: a novel bacterial microcompartment for the aerobic degradation of plant saccharides Appl Environ Microbiol 2014 [in press]
-
(2014)
Appl Environ Microbiol
-
-
Erbilgin, O.1
McDonald, K.L.2
Kerfeld, C.A.3
-
39
-
-
1642500161
-
A novel evolutionary lineage of carbonic anhydrase (ε class) is a component of the carboxysome shell
-
A.K.C. So, G.S. Espie, E.B. Willilams, J.M. Shively, S. Heinhorst, and G.C. Cannon A novel evolutionary lineage of carbonic anhydrase (ε class) is a component of the carboxysome shell J Bacteriol 186 2004 623 630
-
(2004)
J Bacteriol
, vol.186
, pp. 623-630
-
-
So, A.K.C.1
Espie, G.S.2
Willilams, E.B.3
Shively, J.M.4
Heinhorst, S.5
Cannon, G.C.6
-
41
-
-
84889604825
-
Biogenesis of a bacterial organelle: The carboxysome assembly pathway
-
J.C. Cameron, S.C. Wilson, S.L. Bernstein, and C.A. Kerfeld Biogenesis of a bacterial organelle: the carboxysome assembly pathway Cell 155 2013 1131 1140
-
(2013)
Cell
, vol.155
, pp. 1131-1140
-
-
Cameron, J.C.1
Wilson, S.C.2
Bernstein, S.L.3
Kerfeld, C.A.4
-
42
-
-
73649156890
-
Physical principles in the construction of regular viruses
-
D.L.D. Caspar, and A. Klug Physical principles in the construction of regular viruses Cold Spring Harbor Symp Quant Biol 27 1962 1 24
-
(1962)
Cold Spring Harbor Symp Quant Biol
, vol.27
, pp. 1-24
-
-
Caspar, D.L.D.1
Klug, A.2
-
43
-
-
79952178155
-
Structure of PduT, a trimeric bacterial microcompartment protein with a 4Fe-4S cluster-binding site
-
A. Pang, M.J. Warren, and R.W. Pickersgill Structure of PduT, a trimeric bacterial microcompartment protein with a 4Fe-4S cluster-binding site Acta Crystallogr Sect D Biol Crystallogr 67 2011 91 96
-
(2011)
Acta Crystallogr Sect D Biol Crystallogr
, vol.67
, pp. 91-96
-
-
Pang, A.1
Warren, M.J.2
Pickersgill, R.W.3
-
44
-
-
78549246253
-
PduT C38S mutant from Salmonella enterica typhimurium
-
C.S. Crowley, D. Cascio, M.R. Sawaya, J.S. Kopstein, T.A. Bobik, and T.O. Yeates PduT C38S mutant from Salmonella enterica typhimurium J Biol Chem 285 2010 37838 37846
-
(2010)
J Biol Chem
, vol.285
, pp. 37838-37846
-
-
Crowley, C.S.1
Cascio, D.2
Sawaya, M.R.3
Kopstein, J.S.4
Bobik, T.A.5
Yeates, T.O.6
-
45
-
-
84864863698
-
A dodecameric CcmK2 structure suggests β-carboxysomal shell facets have a double-layered organization
-
B. Samborska, and M.S. Kimber A dodecameric CcmK2 structure suggests β-carboxysomal shell facets have a double-layered organization Structure 20 2012 1353 1362
-
(2012)
Structure
, vol.20
, pp. 1353-1362
-
-
Samborska, B.1
Kimber, M.S.2
-
46
-
-
80054806900
-
Intestinal inflammation allows Salmonella to use ethanolamine to compete with the microbiota
-
P. Thiennimitr, S.E. Winter, M.G. Winter, M.N. Xavier, V. Tolstikov, and D.L. Huseby et al. Intestinal inflammation allows Salmonella to use ethanolamine to compete with the microbiota Proc Natl Acad Sci U S A 108 2011 17480 17485
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 17480-17485
-
-
Thiennimitr, P.1
Winter, S.E.2
Winter, M.G.3
Xavier, M.N.4
Tolstikov, V.5
Huseby, D.L.6
|