-
1
-
-
4544321685
-
Phages and the evolution of bacterial pathogens: From genomic rearrangements to lysogenic conversion
-
DOI 10.1128/MMBR.68.3.560-602.2004
-
Brussow H, Canchaya C, Hardt WD (2004) Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion. Microbiol Mol Biol Rev 68: 560-602, table of contents. (Pubitemid 39238283)
-
(2004)
Microbiology and Molecular Biology Reviews
, vol.68
, Issue.3
, pp. 560-602
-
-
Brussow, H.1
Canchaya, C.2
Hardt, W.-D.3
-
2
-
-
0142214650
-
Prophage Contribution to Bacterial Population Dynamics
-
DOI 10.1128/JB.185.21.6467-6471.2003
-
Bossi L, Fuentes JA, Mora G, Figueroa-Bossi N (2003) Prophage contribution to bacterial population dynamics. J Bacteriol 185: 6467-6471. (Pubitemid 37305548)
-
(2003)
Journal of Bacteriology
, vol.185
, Issue.21
, pp. 6467-6471
-
-
Bossi, L.1
Fuentes, J.A.2
Mora, G.3
Figueroa-Bossi, N.4
-
3
-
-
0036214856
-
Temperate phages in Salmonella enterica serovar Typhimurium: Implications for epidemiology
-
Mmolawa PT, Willmore R, Thomas CJ, Heuzenroeder MW (2002) Temperate phages in Salmonella enterica serovar Typhimurium: implications for epidemiology. Int J Med Microbiol 291: 633-644. (Pubitemid 34294498)
-
(2002)
International Journal of Medical Microbiology
, vol.291
, Issue.8
, pp. 633-644
-
-
Mmolawa, P.T.1
Willmore, R.2
Thomas, C.J.3
Heuzenroeder, M.W.4
-
4
-
-
55049133396
-
Bacteriophage genomics
-
Hatfull GF (2008) Bacteriophage genomics. Curr Opin Microbiol 11: 447-453.
-
(2008)
Curr Opin Microbiol
, vol.11
, pp. 447-453
-
-
Hatfull, G.F.1
-
5
-
-
0142152450
-
Bacteriophage ST64B, a Genetic Mosaic of Genes from Diverse Sources Isolated from Salmonella enterica Serovar Typhimurium DT 64
-
DOI 10.1128/JB.185.21.6481-6485.2003
-
Mmolawa PT, Schmieger H, Heuzenroeder MW (2003) Bacteriophage ST64B, a genetic mosaic of genes from diverse sources isolated from Salmonella enterica serovar typhimurium DT 64. J Bacteriol 185: 6481-6485. (Pubitemid 37305551)
-
(2003)
Journal of Bacteriology
, vol.185
, Issue.21
, pp. 6481-6485
-
-
Mmolawa, P.T.1
Schmieger, H.2
Heuzenroeder, M.W.3
-
7
-
-
2942548956
-
Resuscitation of a defective prophage in Salmonella cocultures
-
DOI 10.1128/JB.186.12.4038-4041.2004
-
Figueroa-Bossi N, Bossi L (2004) Resuscitation of a defective prophage in Salmonella cocultures. J Bacteriol 186: 4038-4041. (Pubitemid 38746082)
-
(2004)
Journal of Bacteriology
, vol.186
, Issue.12
, pp. 4038-4041
-
-
Figueroa-Bossi, N.1
Bossi, L.2
-
8
-
-
16844362275
-
Discrimination within phenotypically closely related definitive types of Salmonella enterica serovar typhimurium by the multiple amplification of phage locus typing technique
-
Ross IL, Heuzenroeder MW (2005) Discrimination within phenotypically closely related definitive types of Salmonella enterica serovar typhimurium by the multiple amplification of phage locus typing technique. J Clin Microbiol 43: 1604-1611.
-
(2005)
J Clin Microbiol
, vol.43
, pp. 1604-1611
-
-
Ross, I.L.1
Heuzenroeder, M.W.2
-
9
-
-
33746063732
-
Distribution of prophages and SGI-1 antibiotic-resistance genes among different Salmonella enterica serovar Typhimurium isolates
-
DOI 10.1099/mic.0.28850-0
-
Hermans AP, Beuling AM, van Hoek AH, Aarts HJ, Abee T, et al. (2006) Distribution of prophages and SGI-1 antibiotic-resistance genes among different Salmonella enterica serovar Typhimurium isolates. Microbiology 152: 2137-2147. (Pubitemid 44070468)
-
(2006)
Microbiology
, vol.152
, Issue.7
, pp. 2137-2147
-
-
Hermans, A.P.H.M.1
Beuling, A.M.2
Van Hoek, A.H.A.M.3
Aarts, H.J.M.4
Abee, T.5
Zwietering, M.H.6
-
10
-
-
34548107052
-
Prophage sequences defining hot spots of genome variation in Salmonella enterica serovar Typhimurium can be used to discriminate between field isolates
-
DOI 10.1128/JCM.00729-07
-
Cooke FJ, Wain J, Fookes M, Ivens A, Thomson N, et al. (2007) Prophage sequences defining hot spots of genome variation in Salmonella enterica serovar Typhimurium can be used to discriminate between field isolates. J Clin Microbiol 45: 2590-2598. (Pubitemid 47295492)
-
(2007)
Journal of Clinical Microbiology
, vol.45
, Issue.8
, pp. 2590-2598
-
-
Cooke, F.J.1
Wain, J.2
Fookes, M.3
Ivens, A.4
Thomson, N.5
Brown, D.J.6
Threlfall, E.J.7
Gunn, G.8
Foster, G.9
Dougan, G.10
-
11
-
-
0030876046
-
Unsuspected prophage-like elements in Salmonella typhimurium
-
Figueroa-Bossi N, Coissac E, Netter P, Bossi L (1997) Unsuspected prophage-like elements in Salmonella typhimurium. Mol Microbiol 25: 161-173. (Pubitemid 27316129)
-
(1997)
Molecular Microbiology
, vol.25
, Issue.1
, pp. 161-173
-
-
Figueroa-Bossi, N.1
Coissac, E.2
Netter, P.3
Bossi, L.4
-
12
-
-
0035150884
-
Variable assortment of prophages provides a transferable repertoire of pathogenic determinants in Salmonella
-
DOI 10.1046/j.1365-2958.2001.02234.x
-
Figueroa-Bossi N, Uzzau S, Maloriol D, Bossi L (2001) Variable assortment of prophages provides a transferable repertoire of pathogenic determinants in Salmonella. Mol Microbiol 39: 260-271. (Pubitemid 32113500)
-
(2001)
Molecular Microbiology
, vol.39
, Issue.2
, pp. 260-271
-
-
Figueroa-Bossi, N.1
Uzzau, S.2
Maloriol, D.3
Bossi, L.4
-
13
-
-
53849086112
-
Prophage contribution to Salmonella virulence and diversity
-
Hensel M, Schmidt H, editors. Cambridge, England: Cambridge University Press
-
Lemire S, Figueroa-Bossi N, Bossi L (2008) Prophage contribution to Salmonella virulence and diversity. In: Hensel M, Schmidt H, editors. Horizontal Gene Transfer in the Evolution of Bacterial Pathogenesis. Cambridge, England: Cambridge University Press. pp. 159-191.
-
(2008)
Horizontal Gene Transfer in the Evolution of Bacterial Pathogenesis
, pp. 159-191
-
-
Lemire, S.1
Figueroa-Bossi, N.2
Bossi, L.3
-
14
-
-
84863689609
-
Comparative genome analysis of the high pathogenicity Salmonella Typhimurium strain UK-1
-
Luo Y, Kong Q, Yang J, Mitra A, Golden G, et al. (2012) Comparative genome analysis of the high pathogenicity Salmonella Typhimurium strain UK-1. PLoS One 7: e40645.
-
(2012)
PLoS One
, vol.7
-
-
Luo, Y.1
Kong, Q.2
Yang, J.3
Mitra, A.4
Golden, G.5
-
15
-
-
33745162205
-
Prophage arsenal of Salmonella enterica serovar Typhimurium
-
Waldor M, Friedman D, Adhya S, editors. Washington, DC: ASM Press
-
Bossi L, Figueroa-Bossi N (2005) Prophage arsenal of Salmonella enterica serovar Typhimurium. In: Waldor M, Friedman D, Adhya S, editors. Phages: Their Role in Bacterial Pathogenesis and Biotechnology. Washington, DC: ASM Press.
-
(2005)
Phages: Their Role in Bacterial Pathogenesis and Biotechnology
-
-
Bossi, L.1
Figueroa-Bossi, N.2
-
16
-
-
0017614807
-
Bacteriophage-typing designations of Salmonella typhimurium
-
Anderson ES, Ward, L. R. de Saxe, M. J. and de Sa. J. D. (1977) Bacteriophage-typing designations of Salmonella typhimurium. J Hyg 78:: 297-300.
-
(1977)
J Hyg
, vol.78
, pp. 297-300
-
-
Anderson, E.S.1
Ward, L.R.2
De Saxe, M.J.3
De Sa, J.D.4
-
17
-
-
3142655757
-
ST64B is a defective bacteriophage in Salmonella enterica serovar Typhimurium DT64 that encodes a functional immunity region capable of mediating phage-type conversion
-
DOI 10.1016/j.ijmm.2003.12.001
-
Tucker CP, Heuzenroeder MW (2004) ST64B is a defective bacteriophage in Salmonella enterica serovar Typhimurium DT64 that encodes a functional immunity region capable of mediating phage-type conversion. Int J Med Microbiol 294: 59-63. (Pubitemid 38915614)
-
(2004)
International Journal of Medical Microbiology
, vol.294
, Issue.1
, pp. 59-63
-
-
Tucker, C.P.1
Heuzenroeder, M.W.2
-
18
-
-
5344254628
-
Multiple-locus variable-number tandem-repeats analysis of Salmonella enterica subsp. enterica serovar Typhimurium using PCR multiplexing and multicolor capillary electrophoresis
-
DOI 10.1016/j.mimet.2004.06.014, PII S0167701204001733
-
Lindstedt BA, Vardund T, Aas L, Kapperud G (2004) Multiple-locus variable-number tandem-repeats analysis of Salmonella enterica subsp. enterica serovar Typhimurium using PCR multiplexing and multicolor capillary electrophoresis. J Microbiol Methods 59: 163-172. (Pubitemid 39348775)
-
(2004)
Journal of Microbiological Methods
, vol.59
, Issue.2
, pp. 163-172
-
-
Lindstedt, B.-A.1
Vardund, T.2
Aas, L.3
Kapperud, G.4
-
19
-
-
83955161242
-
A rapid multiplex DNA suspension array method for Salmonella Typhimurium subtyping using prophage-related markers
-
Fang NX, Huang B, Hiley L, Bates J, Savill J (2012) A rapid multiplex DNA suspension array method for Salmonella Typhimurium subtyping using prophage-related markers. J Microbiol Methods 88: 19-27.
-
(2012)
J Microbiol Methods
, vol.88
, pp. 19-27
-
-
Fang, N.X.1
Huang, B.2
Hiley, L.3
Bates, J.4
Savill, J.5
-
20
-
-
77956193448
-
ProgressiveMauve: Multiple genome alignment with gene gain, loss and rearrangement
-
Darling AE, Mau B, Perna NT (2010) progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement. PLoS One 5: e11147.
-
(2010)
PLoS One
, vol.5
-
-
Darling, A.E.1
Mau, B.2
Perna, N.T.3
-
21
-
-
73649127936
-
Short-term signatures of evolutionary change in the Salmonella enterica serovar Typhimurium 14028 genome
-
Jarvik T, Smillie C, Groisman EA, Ochman H (2010) Short-term signatures of evolutionary change in the Salmonella enterica serovar Typhimurium 14028 genome. J Bacteriol 192: 560-567.
-
(2010)
J Bacteriol
, vol.192
, pp. 560-567
-
-
Jarvik, T.1
Smillie, C.2
Groisman, E.A.3
Ochman, H.4
-
22
-
-
57549098085
-
Characterization of the genomes of a diverse collection of Salmonella enterica serovar Typhimurium definitive phage type 104
-
Cooke FJ, Brown DJ, Fookes M, Pickard D, Ivens A, et al. (2008) Characterization of the genomes of a diverse collection of Salmonella enterica serovar Typhimurium definitive phage type 104. J Bacteriol 190: 8155-8162.
-
(2008)
J Bacteriol
, vol.190
, pp. 8155-8162
-
-
Cooke, F.J.1
Brown, D.J.2
Fookes, M.3
Pickard, D.4
Ivens, A.5
-
23
-
-
84862078522
-
CRISPR typing and subtyping for improved laboratory surveillance of Salmonella infections
-
Fabre L, Zhang J, Guigon G, Le Hello S, Guibert V, et al. (2012) CRISPR typing and subtyping for improved laboratory surveillance of Salmonella infections. PLoS One 7: e36995.
-
(2012)
PLoS One
, vol.7
-
-
Fabre, L.1
Zhang, J.2
Guigon, G.3
Le Hello, S.4
Guibert, V.5
-
24
-
-
77956827696
-
Emergence and characterization of Salmonella enterica serovar Typhimurium phage type DT191a
-
Peters T, Hopkins KL, Lane C, Nair S, Wain J, et al. (2010) Emergence and characterization of Salmonella enterica serovar Typhimurium phage type DT191a. J Clin Microbiol 48: 3375-3377.
-
(2010)
J Clin Microbiol
, vol.48
, pp. 3375-3377
-
-
Peters, T.1
Hopkins, K.L.2
Lane, C.3
Nair, S.4
Wain, J.5
-
25
-
-
80052160579
-
An outbreak of Salmonella Typhimurium DT191a associated with reptile feeder mice
-
Harker KS, Lane C, De Pinna E, Adak GK (2011) An outbreak of Salmonella Typhimurium DT191a associated with reptile feeder mice. Epidemiol Infect 139: 1254-1261.
-
(2011)
Epidemiol Infect
, vol.139
, pp. 1254-1261
-
-
Harker, K.S.1
Lane, C.2
De Pinna, E.3
Adak, G.K.4
-
26
-
-
79960435782
-
Complete genome sequence of the universal killer Salmonella enterica Serovar Typhimurium UK-1 (ATCC 68169)
-
Luo Y, Kong Q, Yang J, Golden G, Wanda SY, et al. (2011) Complete genome sequence of the universal killer Salmonella enterica Serovar Typhimurium UK-1 (ATCC 68169). J Bacteriol 193: 4035-4036.
-
(2011)
J Bacteriol
, vol.193
, pp. 4035-4036
-
-
Luo, Y.1
Kong, Q.2
Yang, J.3
Golden, G.4
Wanda, S.Y.5
-
27
-
-
59049106901
-
Molecular epidemiology and evolutionary genetics of Mycobacterium tuberculosis in Taipei
-
Dou HY, Tseng FC, Lin CW, Chang JR, Sun JR, et al. (2008) Molecular epidemiology and evolutionary genetics of Mycobacterium tuberculosis in Taipei. BMC Infect Dis 8: 170.
-
(2008)
BMC Infect Dis
, vol.8
, pp. 170
-
-
Dou, H.Y.1
Tseng, F.C.2
Lin, C.W.3
Chang, J.R.4
Sun, J.R.5
-
28
-
-
0034771431
-
Mycobacterium tuberculosis phylogeny reconstruction based on combined numerical analysis with IS1081, IS6110, VNTR, and DR-based spoligotyping suggests the existence of two new phylogeographical clades
-
DOI 10.1007/s002390010255
-
Sola C, Filliol I, Legrand E, Mokrousov I, Rastogi N (2001) Mycobacterium tuberculosis phylogeny reconstruction based on combined numerical analysis with IS1081, IS6110, VNTR, and DR-based spoligotyping suggests the existence of two new phylogeographical clades. J Mol Evol 53: 680-689. (Pubitemid 32989422)
-
(2001)
Journal of Molecular Evolution
, vol.53
, Issue.6
, pp. 680-689
-
-
Sola, C.1
Filliol, I.2
Legrand, E.3
Mokrousov, I.4
Rastogi, N.5
-
29
-
-
0036900099
-
Microevolution of the direct repeat region of Mycobacterium tuberculosis: Implications for interpretation of spoligotyping data
-
DOI 10.1128/JCM.40.12.4457-4465.2002
-
Warren RM, Streicher EM, Sampson SL, van der Spuy GD, Richardson M, et al. (2002) Microevolution of the direct repeat region of Mycobacterium tuberculosis: implications for interpretation of spoligotyping data. J Clin Microbiol 40: 4457-4465. (Pubitemid 35434931)
-
(2002)
Journal of Clinical Microbiology
, vol.40
, Issue.12
, pp. 4457-4465
-
-
Warren, R.M.1
Streicher, E.M.2
Sampson, S.L.3
Van Der, S.G.D.4
Richardson, M.5
Nguyen, D.6
Behr, M.A.7
Victor, T.C.8
Van Helden, P.D.9
-
30
-
-
0033025861
-
Molecular survey of the Salmonella phage typing system of Anderson
-
Schmieger H (1999) Molecular survey of the Salmonella phage typing system of Anderson. J Bacteriol 181: 1630-1635.
-
(1999)
J Bacteriol
, vol.181
, pp. 1630-1635
-
-
Schmieger, H.1
-
31
-
-
38949123143
-
Phage response to CRISPR-encoded resistance in Streptococcus thermophilus
-
DOI 10.1128/JB.01412-07
-
Deveau H, Barrangou R, Garneau JE, Labonte J, Fremaux C, et al. (2008) Phage response to CRISPR-encoded resistance in Streptococcus thermophilus. J Bacteriol 190: 1390-1400. (Pubitemid 351215022)
-
(2008)
Journal of Bacteriology
, vol.190
, Issue.4
, pp. 1390-1400
-
-
Deveau, H.1
Barrangou, R.2
Garneau, J.E.3
Labonte, J.4
Fremaux, C.5
Boyaval, P.6
Romero, D.A.7
Horvath, P.8
Moineau, S.9
-
32
-
-
77954691493
-
Pork contaminated with Salmonella enterica serovar 4,[5],12:i:-, an emerging health risk for humans
-
Hauser E, Tietze E, Helmuth R, Junker E, Blank K, et al. (2010) Pork contaminated with Salmonella enterica serovar 4,[5],12:i:-, an emerging health risk for humans. Appl Environ Microbiol 76: 4601-4610.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 4601-4610
-
-
Hauser, E.1
Tietze, E.2
Helmuth, R.3
Junker, E.4
Blank, K.5
-
33
-
-
70449640131
-
Salmonella enterica serotype 4,5,12:I:-, an emerging Salmonella serotype that represents multiple distinct clones
-
Soyer Y, Moreno Switt A, Davis MA, Maurer J, McDonough PL, et al. (2009) Salmonella enterica serotype 4,5,12:i:-, an emerging Salmonella serotype that represents multiple distinct clones. J Clin Microbiol 47: 3546-3556.
-
(2009)
J Clin Microbiol
, vol.47
, pp. 3546-3556
-
-
Soyer, Y.1
Moreno Switt, A.2
Davis, M.A.3
Maurer, J.4
McDonough, P.L.5
-
34
-
-
0027242051
-
Genotypes and phylogenetic relationships of Salmonella typhimurium are defined by molecular fingerprinting of IS200 and 16S rrn loci
-
Stanley J, Baquar N, Threlfall EJ (1993) Genotypes and phylogenetic relationships of Salmonella typhimurium are defined by molecular fingerprinting of IS200 and 16S rrn loci. J Gen Microbiol 139 Pt 6: 1133-1140. (Pubitemid 23212235)
-
(1993)
Journal of General Microbiology
, vol.139
, Issue.6
, pp. 1133-1140
-
-
Stanley, J.1
Baquar, N.2
Threlfall, E.J.3
-
35
-
-
0038023102
-
First incursion of Salmonella enterica serotype Typhimurium DT160 into New Zealand
-
Thornley CN, Simmons GC, Callaghan ML, Nicol CM, Baker MG, et al. (2003) First incursion of Salmonella enterica serotype Typhimurium DT160 into New Zealand. Emerg Infect Dis 9: 493-495. (Pubitemid 37070420)
-
(2003)
Emerging Infectious Diseases
, vol.9
, Issue.4
, pp. 493-495
-
-
Thornley, C.N.1
Simmons, G.C.2
Callaghan, M.L.3
Nicol, C.M.4
Baker, M.G.5
Gilmore, K.S.6
Garrett, N.K.G.7
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