Everything old is new again: (Linc)RNAs make proteins!

EMBO Journal

Volumn 33, Issue 9, 2014, Pages 937-938

  Cohen, Stephen M ^a,b  

^a INSTITUTE OF MOLECULAR AND CELL BIOLOGY   (Singapore)

^b NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

Author keywords

[No Author keywords available]

Indexed keywords

APELIN; G PROTEIN COUPLED RECEPTOR; LONG UNTRANSLATED RNA; MICRORNA; PEPTIDE; PHOSPHOLAMBAN;

ARTICLE; CALCIUM TRANSPORT; CELL MOTION; DROSOPHILA; ENDOPLASMIC RETICULUM; GENE EXPRESSION; MORPHOGENESIS; NONHUMAN; OPEN READING FRAME; PRIMORDIAL GERM CELL; PRIORITY JOURNAL; PROTEIN FUNCTION; RNA BINDING; TRIBOLIUM; X CHROMOSOME INACTIVATION;

ANIMALS; CONSERVED SEQUENCE; EVOLUTION, MOLECULAR; HUMANS; OPEN READING FRAMES; RIBOSOMES; RNA, MESSENGER; ZEBRAFISH;

EID: 84899817339     PISSN: 02614189     EISSN: 14602075     Source Type: Journal    
DOI: 10.1002/embj.201488303     Document Type: Article

References (17)

1. Bazzini AA, Johnstone TG, Christiano R, Mackowiak SD, Obermayer B, Fleming ES, Vejnar CE, Lee MT, Rajewsky N, Walther TC, Giraldez AJ, (2014) Identification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation. EMBO J 33: 981-993
2. Chng SC, Ho L, Tian J, Reversade B, (2013) ELABELA: A hormone essential for heart development signals via the apelin receptor. Dev Cell 27: 672-680
3. Galindo MI, Pueyo JI, Fouix S, Bishop SA, Couso JP, (2007) Peptides encoded by short ORFs control development and define a new eukaryotic gene family. PLoS Biol 5: e106
4. Gupta RA, Shah N, Wang KC, Kim J, Horlings HM, Wong DJ, Tsai MC, Hung T, Argani P, Rinn JL, Wang Y, Brzoska P, Kong B, Li R, West RB, van de Vijver MJ, Sukumar S, Chang HY, (2010) Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature 464: 1071-1076
5. Hansen TB, Jensen TI, Clausen BH, Bramsen JB, Finsen B, Damgaard CK, Kjems J, (2013) Natural RNA circles function as efficient microRNA sponges. Nature 495: 384-388
6. Hanyu-Nakamura K, Sonobe-Nojima H, Tanigawa A, Lasko P, Nakamura A, (2008) Drosophila Pgc protein inhibits P-TEFb recruitment to chromatin in primordial germ cells. Nature 451: 730-733
7. Ingolia NT, Ghaemmaghami S, Newman JR, Weissman JS, (2009) Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling. Science 324: 218-223
8. Kondo T, Hashimoto Y, Kato K, Inagaki S, Hayashi S, Kageyama Y, (2007) Small peptide regulators of actin-based cell morphogenesis encoded by a polycistronic mRNA. Nat Cell Biol 9: 660-665
9. Kondo T, Plaza S, Zanet J, Benrabah E, Valenti P, Hashimoto Y, Kobayashi S, Payre F, Kageyama Y, (2010) Small peptides switch the transcriptional activity of Shavenbaby during Drosophila embryogenesis. Science 329: 336-339
10. Magny EG, Pueyo JI, Pearl FM, Cespedes MA, Niven JE, Bishop SA, Couso JP, (2013) Conserved regulation of cardiac calcium uptake by peptides encoded in small open reading frames. Science 341: 1116-1120
11. Martinho RG, Kunwar PS, Casanova J, Lehmann R, (2004) A noncoding RNA is required for the repression of RNApolII-dependent transcription in primordial germ cells. Curr Biol 14: 159-165
12. Memczak S, Jens M, Elefsinioti A, Torti F, Krueger J, Rybak A, Maier L, Mackowiak SD, Gregersen LH, Munschauer M, Loewer A, Ziebold U, Landthaler M, Kocks C, le NF, Rajewsky N, (2013) Circular RNAs are a large class of animal RNAs with regulatory potency. Nature 495: 333-338
13. Orom UA, Derrien T, Beringer M, Gumireddy K, Gardini A, Bussotti G, Lai F, Zytnicki M, Notredame C, Huang Q, Guigo R, Shiekhattar R, (2010) Long noncoding RNAs with enhancer-like function in human cells. Cell 143: 46-58
14. Pauli A, Norris ML, Valen E, Chew GL, Gagnon JA, Zimmerman S, Mitchell A, Ma J, Dubrulle J, Reyon D, Tsai SQ, Joung JK, Saghatelian A, Schier AF, (2014) Toddler: an embryonic signal that promotes cell movement via apelin receptors. Science 343, 1248636
15. Savard J, Marques-Souza H, Aranda M, Tautz D, (2006) A segmentation gene in tribolium produces a polycistronic mRNA that codes for multiple conserved peptides. Cell 126: 559-569
16. Tian D, Sun S, Lee JT, (2010) The long noncoding RNA, Jpx, is a molecular switch for X chromosome inactivation. Cell 143: 390-403
17. Timinszky G, Bortfeld M, Ladurner AG, (2008) Repression of RNA polymerase II transcription by a Drosophila oligopeptide. PLoS ONE 3: e2506