Vitamin D receptor apai gene polymorphism and tuberculosis susceptibility: A meta-analysis

Genetic Testing and Molecular Biomarkers

Volumn 18, Issue 5, 2014, Pages 323-329

  Areeshi, Mohammad Yahya ^a   Mandal, Raju Kumar ^b   Panda, Aditya K ^c   Haque, Shafiul ^d  

^a JAZAN UNIVERSITY   (Saudi Arabia)

^b SANJAY GANDHI POSTGRADUATE INSTITUTE OF MEDICAL SCIENCES   (India)

^c INSTITUTE OF LIFE SCIENCES   (India)

^d JAMIA MILLIA ISLAMIA CENTRAL UNIVERSITY   (India)

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; VITAMIN D RECEPTOR; CALCITRIOL RECEPTOR; GGGCCC-SPECIFIC TYPE II DEOXYRIBONUCLEASES; TYPE II SITE SPECIFIC DEOXYRIBONUCLEASE;

ARTICLE; DISEASE PREDISPOSITION; DNA POLYMORPHISM; GENE FREQUENCY; GENETIC ASSOCIATION; GENETIC HETEROGENEITY; GENETIC MODEL; GENOTYPE; HETEROZYGOTE; HOMOZYGOTE; HUMAN; INNATE IMMUNITY; META ANALYSIS; PUBLISHING; TUBERCULOSIS; GENETIC POLYMORPHISM; GENETIC PREDISPOSITION; GENETICS;

DEOXYRIBONUCLEASES, TYPE II SITE-SPECIFIC; GENETIC PREDISPOSITION TO DISEASE; HUMANS; POLYMORPHISM, GENETIC; RECEPTORS, CALCITRIOL; TUBERCULOSIS;

EID: 84899812711     PISSN: 19450265     EISSN: 19450257     Source Type: Journal    
DOI: 10.1089/gtmb.2013.0451     Document Type: Article

References (35)

1. Alagarasu K, Selvaraj P, Swaminathan S, et al. (2009) 5' regulatory and 3' untranslated region polymorphisms of vitamin D receptor gene in south Indian HIV and HIV-TB patients. J Clin Immunol 29:196-204
2. Areeshi M, Mandal RK, Panda AK, et al. (2013) CD14-159 C > T gene polymorphism with increased risk of tuberculosis: evidence from a meta-analysis. PLoS One 5:e64747
3. Babb C, van der Merwe L, Beyers N, et al. (2007) Vitamin D receptor gene polymorphisms and sputum conversion time in pulmonary tuberculosis patients. Tuberculosis (Edinb) 87: 295-302
4. Bellamy R (2000) Evidence of gene-environment interaction in development of tuberculosis. Lancet 355:588-589
5. Bellamy R (2006) Genome-wide approaches to identifying genetic factors in host susceptibility to tuberculosis. Microbes Infect 8:1119-1123
6. Bornman L, Campbell SJ, Fielding K, et al. (2004) Vitamin D receptor polymorphisms and susceptibility to tuberculosis in West Africa: a case-control and family study. J Infect Dis 190:1631-1641
7. Bouillon R, Carmeliet G, Verlinden L, et al. (2008) Vitamin D and human health: lessons from vitamin D receptor null mice. Endocr Rev 29:726-776
8. Cohn LD, Becker BJ (2003) How meta-analysis increases statistical power. Psychol Methods 8:243-253
9. Cooke GS, Hill AV (2001) Genetics of susceptibility to human infectious disease. Nat Rev Genet 2:967-977
10. Davies PD (1995) Tuberculosis and migration. The Mitchell Lecture 1994. J R Coll Physicians Lond 29:113-138
11. Deluca HF, Cantorna MT (2001) Vitamin D: its role and uses in immunology. FASEB J 14:2579-2585
12. DerSimonian R, Laird N (1986) Meta-analysis in clinical trials. Control Clin Trials 3:177-188
13. Egger M, Davey Smith G, Schneider M, et al. (1997) Bias in meta-analysis detected by a simple, graphical test. BMJ 315: 629-634
14. Fang Y, van Meurs JB, d'Alesio A, et al. (2005) Promoter and 3'-untranslated-region haplotypes in the vitamin d receptor gene predispose to osteoporotic fracture: the rotterdam study. Am J Hum Genet 77:807-823
15. Gao L, Tao Y, Zhang L, et al. (2010) Vitamin D receptor genetic polymorphisms and tuberculosis: updated systematic review and meta-analysis. Int J Tuberc Lung Dis 14:15-23
16. Haussler MR, Whitfield GK, Haussler CA, et al. (1998) The nuclear vitamin D receptor: biological and molecular regulatory properties revealed. J Bone Miner Res 13:325-349
17. Higgins JP, Thompson SG, Deeks JJ et al. (2003) Measuring inconsistency in meta-analyses. BMJ 327:557-560
18. Hill AV (2001) The genomics and genetics of human infectious disease susceptibility. Annu Rev Genomics Hum Genet 2: 373-400
19. Ioannidis JP, Boffetta P, Little J, et al. (2008) Assessment of cumulative evidence on genetic associations: interim guidelines. Int J Epidemiol 37:120-132
20. Lombard Z, Dalton DL, Venter PA, et al. (2006) Association of HLA-DR,-DQ, and vitamin D receptor alleles and haplotypes with tuberculosis in the Venda of South Africa. Hum Immunol 67:643-654
21. Mantel N, Haenszel W (1959) Statistical aspects of the analysis of data from retrospective studies of disease. J Natl Cancer Inst 22:719-748
22. Mö ller M, Hoal EG (2010) Current findings, challenges and novel approaches in human genetic susceptibility to tuberculosis. Tuberculosis (Edinb) 90:71-83
23. Nava-Aguilera E, Andersson N, Harris E, et al. (2009) Risk factors associated with recent transmission of tuberculosis: systematic review and meta-analysis. Int J Tuberc Lung Dis 13:17-26
24. Ogunkolade WB, Boucher BJ, Bustin SA, et al. (2006) Vitamin D metabolism in peripheral blood mononuclear cells is influenced by chewing ''betel nut'' (Areca catechu) and vitamin D status. J Clin Endocrinol Metab 91:2612-2617
25. Olesen R, Wejse C, Velez DR, et al. (2007) DC-SIGN (CD209), pentraxin 3 and vitamin D receptor gene variants associate with pulmonary tuberculosis risk in West Africans. Genes Immun 8:456-467
26. Rockett KA, Brookes R, Udalova I, et al. (1998) 1,25-Dihydroxyvitamin D3 induces nitric oxide synthase and suppresses growth of Mycobacterium tuberculosis in a human macrophage-like cell line. Infect Immun 66:5314-5321
27. Rosman MD, Oner-Eyupoglu AF (1998) Clinical presentation and treatment of tuberculosis. In: Fishman AP (ed) Fishman's Pulmonary Diseases and Disorders. McGraw-Hill, New York, pp. 2483-2502
28. Selvaraj P, Chandra G, Jawahar MS, et al. (2004a) Regulatory role of vitamin D receptor gene variants of Bsm I, Apa I, Taq I, and Fok I polymorphisms on macrophage phagocytosis and lymphoproliferative response to mycobacterium tuberculosis antigen in pulmonary tuberculosis. J Clin Immunol 24:523-532
29. Selvaraj P, Kurian SM, Chandra G, et al. (2004b) Vitamin D receptor gene variants of BsmI, ApaI, TaqI, and FokI polymorphisms in spinal tuberculosis. Clin Genet 65:73-76
30. Selvaraj P, Prabhu Anand S, Harishankar M, et al. (2009) Plasma 1,25 dihydroxy vitamin D3 level and expression of vitamin d receptor and cathelicidin in pulmonary tuberculosis. J Clin Immunol 29:470-478
31. Selvaraj P, Vidyarani M, Alagarasu K, et al. (2008) Regulatory role of promoter and 3' UTR variants of vitamin D receptor gene on cytokine response in pulmonary tuberculosis. J Clin Immunol 28:306-313
32. Sharma PR, Singh S, Jena M, et al. (2011) Coding and noncoding polymorphisms in VDR gene and susceptibility to pulmonary tuberculosis in tribes, castes and Muslims of Central India. Infect Genet Evol 11:1456-1461
33. Vidyarani M, Selvaraj P, Raghavan S, et al. (2009) Regulatory role of 1, 25-dihydroxyvitamin D3 and vitamin D receptor gene variants on intracellular granzyme A expression in pulmonary tuberculosis. Exp Mol Pathol 86:69-73
34. World Health Organization (2012) Global Tuberculosis Report. Available at http://www.who.int/tb/publications/global-report/ gtbr12-main.pdf
35. Wu R, Li B (1999) A multiplicative-epistatic model for analyzing interspecific differences in outcrossing species. Biometrics 55:355-365.