-
1
-
-
58149200943
-
The carbohydrate-active enzymes database (cazy): An expert resource for glycogenomics
-
Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V et ah (2009) The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Nuc Ac Res 37:D233-D238
-
(2009)
Nuc Ac Res
, vol.37
-
-
Cantarel, B.L.1
Coutinho, P.M.2
Rancurel, C.3
Bernard, T.4
Lombard, V.5
-
2
-
-
4744368323
-
Carbohydrate-binding modules: Fine-tuning polysaccharide recognition
-
DOI 10.1042/BJ20040892
-
Boraston AB, Bolam DN, Gilbert HJ and Davies GJ (2004) Carbohydrate-binding modules: fine-tuning polysaccharide recognition. BiochemJ 382:769-781 (Pubitemid 39312891)
-
(2004)
Biochemical Journal
, vol.382
, Issue.3
, pp. 769-781
-
-
Boraston, A.B.1
Bolam, D.N.2
Gilbert, H.J.3
Davies, G.J.4
-
3
-
-
0025168749
-
Molecular biology of cellulose degradation
-
Beguin P (1990) Molecular Biology of Cellulose Degradation. Ann Rev Microbiol 44:219-248
-
(1990)
Ann Rev Microbiol
, vol.44
, pp. 219-248
-
-
Beguin, P.1
-
4
-
-
80053088478
-
Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components
-
Quinlan RJ, Sweeney MD, Lo Leggio L, Otten H, Poulsen J-CN et al (2011) Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components. PNAS 108:5079-15084
-
(2011)
PNAS
, vol.108
, pp. 5079-15084
-
-
Quinlan, R.J.1
Sweeney, M.D.2
Lo Leggio, L.3
Otten, H.4
Poulsen, J.-C.N.5
-
5
-
-
84055197660
-
Cellobiose dehydrogenase and a copper-dependent polysaccharide monooxygenase potentiate cellulose degradation by neurospora crassa
-
Phillips CM, Beeson WT, Cate JH and Marietta MA (2011) Cellobiose dehydrogenase and a copper-dependent polysaccharide monooxygenase potentiate cellulose degradation by Neurospora crassa. ACS Chemical Biology 6:1399-1406
-
(2011)
ACS Chemical Biology
, vol.6
, pp. 1399-1406
-
-
Phillips, C.M.1
Beeson, W.T.2
Cate, J.H.3
Marietta, M.A.4
-
6
-
-
81755166559
-
The putative endoglucanase pcgh61d from phanerochaete chrysosporium is a metal-dependent oxidative enzyme that cleaves cellulose
-
Westereng B, Ishida T, Vaaje-Kolstad G, Wu M, Eijsink VGH et al (2011) The putative endoglucanase PcGH61D from Phanerochaete chrysosporium is a metal-dependent oxidative enzyme that cleaves cellulose. PLOS One 6:e27807
-
(2011)
PLOS One
, vol.6
-
-
Westereng, B.1
Ishida, T.2
Vaaje-Kolstad, G.3
Wu, M.4
Eijsink, V.G.H.5
-
7
-
-
0026698666
-
Isolation and characterization of a cellulose-growth-specific gene from agaricus bisporus
-
1992
-
Raguz S, Yagiie E, Wood D and Thurston C (1992) Isolation and characterization of a cellulose-growth-specific gene from Agaricus bisporus. Gene 119:183-190, 1992.
-
(1992)
Gene
, vol.119
, pp. 183-190
-
-
Raguz, S.1
Yagiie, E.2
Wood, D.3
Thurston, C.4
-
8
-
-
0030669760
-
CDNA cloning of a Trichoderma reesei cellulase and demonstration of endoglucanase activity by expression in yeast
-
Saloheimo M, Nakari-SetaLa T, Tenkanen M and Penttila M (1997) cDNA cloning of a Trichoderma reesei cellulase and demonstration off endoglucanase activity expression in yeast. Eur J Biochem 249:584-591 (Pubitemid 27455803)
-
(1997)
European Journal of Biochemistry
, vol.249
, Issue.2
, pp. 584-591
-
-
Saloheimo, M.1
Nakari-Setala, T.2
Tenkanen, M.3
Penttila, M.4
-
9
-
-
0030733350
-
Structural and sequence-based classification of glycoside hydrolases
-
DOI 10.1016/S0959-440X(97)80072-3
-
Henrissat B and Davies G (1997) Structural and sequence-based classification of glycoside hydrolases. Curr Opin Struct Biol 7:637-644. (Pubitemid 27472582)
-
(1997)
Current Opinion in Structural Biology
, vol.7
, Issue.5
, pp. 637-644
-
-
Henrissat, B.1
Davies, G.2
-
10
-
-
0035663210
-
Homologous expression and characterization of Cel61A (EG IV) of Trichoderma reesei
-
DOI 10.1046/j.0014-2956.2001.02605.x
-
Karlsson J, Saloheimo M, Siika-aho M, Tenkanen M, Penttila M et al (2001) Homologous expression and characterization of Cel61A (EG IV) of Trichoderma reesei, Eur J Biochem 268:6498-6507 (Pubitemid 34014758)
-
(2001)
European Journal of Biochemistry
, vol.268
, Issue.24
, pp. 6498-6507
-
-
Karlsson, J.1
Saloheimo, M.2
Siika-Aho, M.3
Tenkanen, M.4
Penttila, M.5
Tjerneld, F.6
-
11
-
-
0036841854
-
Transcript analysis of genes encoding a family 61 endoglucanase and a putative membrane-anchored family 9 glycosyl hydrolase from Phanerochaete chrysosporium
-
Wymelenberg AV, Denman S, Dietrich D, Bassett J, Yu X et al (2002) Transcript Analysis of Genes Encoding a Family 61 Endoglucanase and a Putative Membrane-Anchored Family 9 Glycosyl Hydrolase from Phanerochaete chrysosporium. App Env Microbiol 68:5765-5768 (Pubitemid 35265721)
-
(2002)
Applied and Environmental Microbiology
, vol.68
, Issue.11
, pp. 5765-5768
-
-
Vanden Wymelenberg, A.1
Denman, S.2
Dietrich, D.3
Bassett, J.4
Yu, X.5
Atalla, R.6
Predki, P.7
Rudsander, U.8
Teeri, T.T.9
Cullen, D.10
-
13
-
-
52049106382
-
The first structure of a glycoside hydrolase family 61 member, cel61b from hypocrea jecorina at 1.6 a resolution
-
Karkehabadi S, Hansson H, Kim S, Piens K, Mitchinson C et al (2008) The first structure of a glycoside hydrolase family 61 member, Cel61B from Hypocrea jecorina at 1.6 A resolution. J Mol Biol 383:144-154
-
(2008)
J Mol Biol
, vol.383
, pp. 144-154
-
-
Karkehabadi, S.1
Hansson, H.2
Kim, S.3
Piens, K.4
Mitchinson, C.5
-
14
-
-
77950948151
-
Stimulation of lignocellulosic biomass hydrolysis by proteins of glycoside hydrolase family 61: Structure and function of a large, enigmatic family
-
Harris PV, Welner D, McFarland KC, Re E, Poulsen J-CN et al (2010) Stimulation of lignocellulosic biomass hydrolysis by proteins of glycoside hydrolase family 61: Structure and function of a large, enigmatic family. Biochemistry 49:3305-3316
-
(2010)
Biochemistry
, vol.49
, pp. 3305-3316
-
-
Harris, P.V.1
Welner, D.2
McFarland, K.C.3
Re, E.4
Poulsen, J.-C.N.5
-
17
-
-
15744367514
-
Crystal structure and binding properties of the Serratia marcescens chitin-binding protein CBP21
-
DOI 10.1074/jbc.M407175200
-
Vaaje-Kolstad G, Houston D, Riemen A, Eijsink V and van Aalten D (2005) Crystal structure and binding properties of the Serratia marcescens chitin-binding protein CBP21. J Biol Chem 280: 11313-11319 (Pubitemid 40418438)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.12
, pp. 11313-11319
-
-
Vaaje-Kolstad, G.1
Houston, D.R.2
Riemen, A.H.K.3
Eijsink, V.G.H.4
Van Aalten, D.M.F.5
-
18
-
-
23344446196
-
The non-catalytic chitin-binding protein CBP21 from Serratia marcescens is essential for chitin degradation
-
DOI 10.1074/jbc.M504468200
-
Vaaje-Kolstad G, Horn SJ, van Aalten DMF, Synstad B and Eijsink VGH (2005) The non-catalytic chitin-binding protein CBP21 from Serratia marcescens is essential for chitin degradation. J Biol Chem 280:28492-28497 (Pubitemid 41105749)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.31
, pp. 28492-28497
-
-
Vaaje-Kolstad, G.1
Horn, S.J.2
Van Aalten, D.M.F.3
Synstad, B.4
Eijsink, V.G.H.5
-
19
-
-
67149111640
-
Transcriptome and secretome analyses of phanerochaete chrysosporium reveal complex patterns of gene expression
-
Wymelenberg AV, Gaskell J, Mozuch M, Kersten P, Sabat G et al (2009) Transcriptome and secretome analyses of Phanerochaete chrysosporium reveal complex patterns of gene expression. App Env Microbiol 75:4058-4068
-
(2009)
App Env Microbiol
, vol.75
, pp. 4058-4068
-
-
Wymelenberg, A.V.1
Gaskell, J.2
Mozuch, M.3
Kersten, P.4
Sabat, G.5
-
21
-
-
77957727454
-
-
Vaaje-Kolstad G, Westereng B, Horn SJ, Liu Z, Zhai H et al (2010) An Oxidative Enzyme Boosting the Enzymatic Conversion of Recalcitrant Polysaccharides Science 330:219-222
-
(2010)
An Oxidative Enzyme Boosting the Enzymatic Conversion of Recalcitrant Polysaccharides Science
, vol.330
, pp. 219-222
-
-
Vaaje-Kolstad, G.1
Westereng, B.2
Horn, S.J.3
Liu, Z.4
Zhai, H.5
-
22
-
-
84860389363
-
Cleavage of cellulose by a cbm33 protein
-
Forsberg Z, Vaaje-Kolstad G, Westereng B, Bunses AC, Stenstram Y et al (2011) Cleavage of cellulose by a CBM33 protein. Prot Sci 20:1479-1483
-
(2011)
Prot Sci
, vol.20
, pp. 1479-1483
-
-
Forsberg, Z.1
Vaaje-Kolstad, G.2
Westereng, B.3
Bunses, A.C.4
Stenstram, Y.5
-
23
-
-
81755178934
-
Oxidoreductive cellulose depolymerization by the enzymes cellobiose dehydrogenase and glycoside hydrolase 61
-
Langston JA, Shaghasi T, Abbate E, Xu F, Vlasenko E et al (2011) Oxidoreductive cellulose depolymerization by the enzymes cellobiose dehydrogenase and glycoside hydrolase 61. App Env Microbiol 77:7007-7015
-
(2011)
App Env Microbiol
, vol.77
, pp. 7007-7015
-
-
Langston, J.A.1
Shaghasi, T.2
Abbate, E.3
Xu, F.4
Vlasenko, E.5
-
24
-
-
84860351767
-
Cloning, expression, and characterization of a cellobiose dehydrogenase from thielavia terrestris induced under cellulose growth conditions
-
Langston JA, Brown K, Xu F, Borch K, Garner A and Sweeney MD (2012) Cloning, expression, and characterization of a cellobiose dehydrogenase from Thielavia terrestris induced under cellulose growth conditions. BBA 1824:802-812
-
(2012)
BBA
, vol.1824
, pp. 802-812
-
-
Langston, J.A.1
Brown, K.2
Xu, F.3
Borch, K.4
Garner, A.5
Sweeney, M.D.6
-
25
-
-
84855912007
-
Oxidative cleavage of cellulose by fungal copper-dependent polysaccharide monooxygenases
-
Beeson WT, Phillips CM, Cate JHD and Marietta MA (2012) Oxidative cleavage of cellulose by fungal copper-dependent polysaccharide monooxygenases. JACS 134:890-892
-
(2012)
JACS
, vol.134
, pp. 890-892
-
-
Beeson, W.T.1
Phillips, C.M.2
Cate, J.H.D.3
Marietta, M.A.4
-
26
-
-
84861987031
-
Structural basis for substrate targeting and catalysis by fungal polysaccharide monooxygenases
-
Li X, Beeson WT, Phillips CM, Marietta MA and Cate JH (2012) Structural basis for substrate targeting and catalysis by fungal polysaccharide monooxygenases. Structure 20:1051-1061
-
(2012)
Structure
, vol.20
, pp. 1051-1061
-
-
Li, X.1
Beeson, W.T.2
Phillips, C.M.3
Marietta, M.A.4
Cate, J.H.5
-
27
-
-
84856500612
-
Characterization of the chitinolytic machinery of enterococcus faecalis v583 and high-resolution structure of its oxidative cbm33 enzyme
-
Vaaje-Kolstad G, Bohle AL, Gaseidnes S, Dalhus B, Bjoras M et al (2012) Characterization of the chitinolytic machinery of Enterococcus faecalis V583 and high-resolution structure of its oxidative CBM33 Enzyme. J Mol Biol 416:239-254
-
(2012)
J Mol Biol
, vol.416
, pp. 239-254
-
-
Vaaje-Kolstad, G.1
Bohle, A.L.2
Gaseidnes, S.3
Dalhus, B.4
Bjoras, M.5
-
29
-
-
36448991500
-
Clustalw and clustalx version 2
-
Larkin M, Blackshields G, Brown N, Chenna R, McGettigan P et al (2007) ClustalW and ClustalX version 2. Bioinformatics 23:2947-2948
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.1
Blackshields, G.2
Brown, N.3
Chenna, R.4
McGettigan, P.5
-
31
-
-
25144458667
-
A new progressive-iterative algorithm for multiple structure alignment
-
DOI 10.1093/bioinformatics/bti527
-
Lupyan D, Leo-Macias A and Ortiz A (2005) A new progressive-iterative algorithm for multiple structure alignment. Bioinformatics 21:3255-3263 (Pubitemid 41418439)
-
(2005)
Bioinformatics
, vol.21
, Issue.15
, pp. 3255-3263
-
-
Lupyan, D.1
Leo-Macias, A.2
Ortiz, A.R.3
-
32
-
-
78149297086
-
CAZymes Analysis Toolkit (CAT): Web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database
-
Park BH, Karpinets TV, Syed MH, Leuze MR and Uberbacher EC (2010) CAZymes Analysis Toolkit (CAT): Web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database. Glycobiology 20:1574-1584
-
(2010)
Glycobiology
, vol.20
, pp. 1574-1584
-
-
Park, B.H.1
Karpinets, T.V.2
Syed, M.H.3
Leuze, M.R.4
Uberbacher, E.C.5
-
33
-
-
84864582821
-
Substrate-specific transcription of the enigmatic gh61 family of the pathogenic white-rot fungus heterobasidion irregulare during growth on lignocellulose
-
Yakovlev I, Vaaje-Kolstad G, Hietala AM, Stefaiiczyk E, Solheim H et al (2012) Substrate-specific transcription of the enigmatic GH61 family of the pathogenic white-rot fungus Heterobasidion irregulare during growth on lignocellulose. App Micr Biotech 95:979-990
-
(2012)
App Micr Biotech
, vol.95
, pp. 979-990
-
-
Yakovlev, I.1
Vaaje-Kolstad, G.2
Hietala, A.M.3
Stefaiiczyk, E.4
Solheim, H.5
-
34
-
-
0024962351
-
Determination of the three-dimensional solution structure of the c-terminal domain of cellobiohydrolase i from trichoderma reesei. A study using nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing
-
Kraulis P, Clore G, Nilges M, Jones T, Pettersson G et al (1989) Determination of the three-dimensional solution structure of the C-terminal domain of cellobiohydrolase I from Trichoderma reesei. A study using nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing. Biochemistry 28:7241-7257
-
(1989)
Biochemistry
, vol.28
, pp. 7241-7257
-
-
Kraulis, P.1
Clore, G.2
Nilges, M.3
Jones, T.4
Pettersson, G.5
-
36
-
-
81855172208
-
Crystal structure and characterization of particulate methane monooxygenase from methylocystis species strain m
-
Smith S, Rawat S, Telser J, Hoffman B, Stemmler T et al. (2011) Crystal structure and characterization of particulate methane monooxygenase from Methylocystis species strain M. Biochemistry 50:10231-10240
-
(2011)
Biochemistry
, vol.50
, pp. 10231-10240
-
-
Smith, S.1
Rawat, S.2
Telser, J.3
Hoffman, B.4
Stemmler, T.5
-
37
-
-
80054733932
-
Comparative genomic analysis of the thermophilic biomass degrading fungi myceliophthora thermophila and thielavia terrestris
-
Berka RM, Grigoriev IV, Otillar R, Salamov A, Grimwood J et al. (2011) Comparative genomic analysis of the thermophilic biomass degrading fungi Myceliophthora thermophila and Thielavia terrestris. Nature biotech 29:922-927
-
(2011)
Nature biotech
, vol.29
, pp. 922-927
-
-
Berka, R.M.1
Grigoriev, I.V.2
Otillar, R.3
Salamov, A.4
Grimwood, J.5
-
39
-
-
79958235330
-
Transcriptomic responses of the softwood-degrading white-rot fungus phanerochaete carnosa during growth on coniferous and deciduous wood
-
MacDonald J, Doering M, Canam T, Gong Y, Guttman DS et al (2011) Transcriptomic responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood. App Env Microbiol 77:3211-3218
-
(2011)
App Env Microbiol
, vol.77
, pp. 3211-3218
-
-
MacDonald, J.1
Doering, M.2
Canam, T.3
Gong, Y.4
Guttman, D.S.5
-
40
-
-
84864121246
-
A time course analysis of the extracellular proteome of llus nidulans growing on sorghum stover
-
Saykhedkar S, Ray A, Ayoubi-Canaan P, Hartson SD, Prade R et al (2012) A time course analysis of the extracellular proteome of llus nidulans growing on sorghum stover. Biotec Biofuels 5:52
-
(2012)
Biotec Biofuels
, vol.5
, pp. 52
-
-
Saykhedkar, S.1
Ray, A.2
Ayoubi-Canaan, P.3
Hartson, S.D.4
Prade, R.5
-
41
-
-
84862173322
-
Production and effect of aldonic acids during enzymatic hydrolysis of lignocellulose at high dry matter content
-
Cannella D, Hsieh C-WC, Felby C and Jorgensen H (2012) Production and effect of aldonic acids during enzymatic hydrolysis of lignocellulose at high dry matter content. Biotec Biofuels 5:26
-
(2012)
Biotec Biofuels
, vol.5
, pp. 26
-
-
Cannella, D.1
Hsieh, C.-W.C.2
Felby, C.3
Jorgensen, H.4
-
42
-
-
84858287477
-
Lignin boosts the cellulase performance of a gh-61 enzyme from sporotrichum thermophile
-
Dimarogona M, Topakas E, Olsson L and Christakopoulos P (2011) Lignin boosts the cellulase performance of a GH-61 enzyme from Sporotrichum thermophile. Biores Techn, 110:480-487
-
(2011)
Biores Techn
, vol.110
, pp. 480-487
-
-
Dimarogona, M.1
Topakas, E.2
Olsson, L.3
Christakopoulos, P.4
-
43
-
-
0021858525
-
Reversible inhibitors of 3-glucosidase
-
Dale M, Ensley H, Kern K, Sastry K and Byers L (1985) Reversible inhibitors of 3-glucosidase. Biochemistry 24:3530-3539
-
(1985)
Biochemistry
, vol.24
, pp. 3530-3539
-
-
Dale, M.1
Ensley, H.2
Kern, K.3
Sastry, K.4
Byers, L.5
|