-
1
-
-
6044264956
-
Trichoderma brevicompactum sp. nov.
-
Kraus GF, Druzhinina I, Gams W, Bissett J, Zafari D, et al. (2004) Trichoderma brevicompactum sp. nov. Mycologia 96: 1059-1073.
-
(2004)
Mycologia
, vol.96
, pp. 1059-1073
-
-
Kraus, G.F.1
Druzhinina, I.2
Gams, W.3
Bissett, J.4
Zafari, D.5
-
2
-
-
78751617963
-
Overexpression of the trichodiene synthase gene tri5 increases trichodermin production and antimicrobial activity in Trichoderma brevicompactum
-
Tijerino A, Cardoza RE, Moraga J, Malmierca MG, Vicente F, et al. (2011) Overexpression of the trichodiene synthase gene tri5 increases trichodermin production and antimicrobial activity in Trichoderma brevicompactum. Fungal Genetics and Biology 48: 285-296.
-
(2011)
Fungal Genetics and Biology
, vol.48
, pp. 285-296
-
-
Tijerino, A.1
Cardoza, R.E.2
Moraga, J.3
Malmierca, M.G.4
Vicente, F.5
-
3
-
-
27644541909
-
Trichothecene production by Trichoderma brevicompactum
-
DOI 10.1021/jf051279b
-
Nielsen KF, GrafenhanT, Zafari D, Thrane U (2005) Trichothecene Production by Trichoderma brevicompactum. J Agric Food Chem 53: 8190-8196. (Pubitemid 41564625)
-
(2005)
Journal of Agricultural and Food Chemistry
, vol.53
, Issue.21
, pp. 8190-8196
-
-
Nielsen, K.F.1
Grafenhan, T.2
Zafari, D.3
Thrane, U.4
-
4
-
-
48349131023
-
The Trichoderma brevicompactum clade: A separate lineage with new species, new peptaibiotics, and mycotoxins
-
Degenkolb T, Dieckmann R, Nielsen KF, Gräfenhan T, Theis C, et al. (2008) The Trichoderma brevicompactum clade: a separate lineage with new species, new peptaibiotics, and mycotoxins. Mycol Progress 7: 177-219.
-
(2008)
Mycol Progress
, vol.7
, pp. 177-219
-
-
Degenkolb, T.1
Dieckmann, R.2
Nielsen, K.F.3
Gräfenhan, T.4
Theis, C.5
-
6
-
-
0015690950
-
Peptidyltransferase inhibition by trichodermin
-
Tate WP, Caskey CT (1973) Peptidyltransferase inhibition by trichodermin. J Bio Chem 22: 7970-7972.
-
(1973)
J Bio Chem
, vol.22
, pp. 7970-7972
-
-
Tate, W.P.1
Caskey, C.T.2
-
7
-
-
33847717080
-
The trichothecenes and their biosynthesis
-
Grove JF (2007) The trichothecenes and their biosynthesis. Fortschr Chem Org Naturst 88: 63-130.
-
(2007)
Fortschr Chem Org Naturst
, vol.88
, pp. 63-130
-
-
Grove, J.F.1
-
8
-
-
0012326192
-
Biosynthesis and regulation of trichothecene production by Fusarium species
-
Bhatnagar D, Lilehoj EB, Arora DK (Eds), Handbook of Applied Mycology. Marcel Dekker, Inc., New York, USA
-
Beremand MN, Mc Cormick SP (1992) Biosynthesis and regulation of trichothecene production by Fusarium species. In: Bhatnagar D, Lilehoj EB, Arora DK (Eds), Handbook of Applied Mycology. Mycotoxins in Ecological Systems, vol. 5. Marcel Dekker, Inc., New York, USA, pp.360-389.
-
(1992)
Mycotoxins in Ecological Systems
, vol.5
, pp. 360-389
-
-
Beremand, M.N.1
Mc Cormick, S.P.2
-
9
-
-
34848887815
-
Molecular and genetic studies of Fusarium trichothecene biosynthesis: Pathways, genes, and evolution
-
DOI 10.1271/bbb.70183
-
Kimura M, Tokai T, Takahashi-Ando N, Ohsato S, Fujita M (2007) Molecular and genetic studies of Fusarium trichothecene biosynthesis: pathways, genes, and evolution. Biosci Biotechnol Biochem 71: 2105-2123. (Pubitemid 350113090)
-
(2007)
Bioscience, Biotechnology and Biochemistry
, vol.71
, Issue.9
, pp. 2105-2123
-
-
Kimura, M.1
Tokai, T.2
Takahashi-Ando, N.3
Ohsato, S.4
Fujimura, M.5
-
10
-
-
1442358129
-
Functional demarcation of the Fusarium core trichothecene gene cluster
-
DOI 10.1016/j.fgb.2003.12.002, PII S1087184503002135
-
Brown DW, Dyer RB, Mc Cormick SP, Kendra DF, Plattner RD (2004) Functional demarcation of the Fusarium core trichothecene gene cluster. Fungal Genet Biol 41: 454-462. (Pubitemid 38283834)
-
(2004)
Fungal Genetics and Biology
, vol.41
, Issue.4
, pp. 454-462
-
-
Brown, D.W.1
Dyer, R.B.2
McCormick, S.P.3
Kendra, D.F.4
Plattner, R.D.5
-
11
-
-
0037047046
-
Ancestral polymorphism and adaptive evolution in the trichothecene mycotoxin gene cluster of phytopathogenic Fusarium
-
DOI 10.1073/pnas.142307199
-
Ward TJ, Bielawski JP, Kistler HC, Sullivan E, O' Donnell K (2002) Ancestral polymorphism and adaptative evolution in the trichothecene mycotoxin gene cluster of phytopathogenic Fusarium. Proc Natl Acad Sci USA 99: 9278-9283. (Pubitemid 34764604)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.14
, pp. 9278-9283
-
-
Ward, T.J.1
Bielawski, J.P.2
Corby, K.H.3
Sullivan, E.4
O'Donnell, K.5
-
12
-
-
79961092513
-
Identification of loci and functional characterization of trichothecene biosynthetic genes in the filamentous fungus Trichoderma
-
Cardoza RE, Malmierca MG, Hermosa MR, Alexander NJ, Mccormick SP, et al. (2011) Identification of loci and functional characterization of trichothecene biosynthetic genes in the filamentous fungus Trichoderma . Appl Environ Microbiol 77: 4867-4877.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 4867-4877
-
-
Cardoza, R.E.1
Malmierca, M.G.2
Hermosa, M.R.3
Alexander, N.J.4
Mccormick, S.P.5
-
13
-
-
43449098828
-
Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)
-
Martinez D, Berka RM, H enrissat B, Saloheimo M, Arvas M, et al. (2008) Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina) . Nat Biotechnol 26: 553-561.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 553-561
-
-
Martinez, D.1
Berka, R.M.2
Henrissat, B.3
Saloheimo, M.4
Arvas, M.5
-
14
-
-
79955115574
-
Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma
-
Kubicek CP, Herrera- Estrella A, Seidl-Seiboth V, Martinez DA, Druzhinina IS, et al. (2011) Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma. Genome Biol 12: 1-15.
-
(2011)
Genome Biol
, vol.12
, pp. 1-15
-
-
Kubicek, C.P.1
Herrera-Estrella, A.2
Seidl-Seiboth, V.3
Martinez, D.A.4
Druzhinina, I.S.5
-
15
-
-
67349209853
-
Next-generation DNA sequencing techniques
-
Ansorge WJ (2009) Next-generation DNA sequencing techniques. N Biotechnol 25: 195-203.
-
(2009)
N Biotechnol
, vol.25
, pp. 195-203
-
-
Ansorge, W.J.1
-
16
-
-
78650145074
-
Transcriptome analysis of the brown planthopper Nilaparvata lugens
-
Xue J, Bao YY, Li BL, Cheng YB, Peng ZY, et al. (2010) Transcriptome analysis of the brown planthopper Nilaparvata lugens . PlosOne 5: e14233.
-
(2010)
PlosOne
, vol.5
-
-
Xue, J.1
Bao, Y.Y.2
Li, B.L.3
Cheng, Y.B.4
Peng, Z.Y.5
-
17
-
-
77954450225
-
De novo characterization of a whitefly transcriptome and analysis of its gene expression during development
-
Wang XW, Luan JB, Li JM, Bao YY, Zhang CX, et al. (2010) De novo characterization of a whitefly transcriptome and analysis of its gene expression during development. BMC Genomics11: 400-410.
-
(2010)
BMC Genomics
, vol.11
, pp. 400-410
-
-
Wang, X.W.1
Luan, J.B.2
Li, J.M.3
Bao, Y.Y.4
Zhang, C.X.5
-
18
-
-
78649969759
-
De Novo Transcriptome sequencing in Anopheles funestus using Illumina RNA-Seq technology
-
Crawford JE, Guelbeogo WM, Sanou A, Traore' A, Vernick KD, et al. (2010) De Novo Transcriptome sequencing in Anopheles funestus using Illumina RNA-Seq technology. PlosOne 5: e14202.
-
(2010)
PlosOne
, vol.5
-
-
Crawford, J.E.1
Guelbeogo, W.M.2
Sanou, A.3
Traore', A.4
Vernick, K.D.5
-
19
-
-
36849073678
-
Sequencing breakthroughs for genomic ecology and evolutionary biology
-
Hudson HE (2008) Sequencing breakthroughs for genomic ecology and evolutionary biology. Mol Ecol Resour 8: 3-17.
-
(2008)
Mol Ecol Resour
, vol.8
, pp. 3-17
-
-
Hudson, H.E.1
-
20
-
-
57649114637
-
Identification and quantification of trichodermin in fermentation by GC
-
Shentu XP, Shi YJ, Yu XP (2008) Identification and quantification of trichodermin in fermentation by GC. Chin Pharm J 43:1755-1756.
-
(2008)
Chin Pharm J
, vol.43
, pp. 1755-1756
-
-
Shentu, X.P.1
Shi, Y.J.2
Yu, X.P.3
-
21
-
-
79960264362
-
Full-length transcriptome assembly from RNA-Seq data without a reference genome
-
Grabherr MG, Haas BJ, Yassour M, Levin JZ, Thompson DA, et al. (2011) Full-length transcriptome assembly from RNA-Seq data without a reference genome. Nat Biotechnol 29: 644-665.
-
(2011)
Nat Biotechnol
, vol.29
, pp. 644-665
-
-
Grabherr, M.G.1
Haas, B.J.2
Yassour, M.3
Levin, J.Z.4
Thompson, D.A.5
-
22
-
-
0037460985
-
TIGR gene indices clustering tools (TGICL): A software system for fast clustering of large EST datasets
-
DOI 10.1093/bioinformatics/btg034
-
Pertea G, Huang XQ, Liang F, Antonescu V, Sultana R, et al. (2003) TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets. Bioinformatics 19: 651-652. (Pubitemid 36417060)
-
(2003)
Bioinformatics
, vol.19
, Issue.5
, pp. 651-652
-
-
Pertea, G.1
Huang, X.2
Liang, F.3
Antonescu, V.4
Sultana, R.5
Karamycheva, S.6
Lee, Y.7
White, J.8
Cheung, F.9
Parvizi, B.10
Tsai, J.11
Quackenbush, J.12
-
23
-
-
33745488660
-
EST sequencing and phylogenetic analysis of the model grass Brachypodium distachyon
-
DOI 10.1007/s00122-006-0285-3
-
Vogel JP, Gu YQ, Twigg P, Lazo GR, Laudencia- Chingcuanco D, et al. (2006) EST sequencing and phylogenetic analysis of the model grass Brachypodium distachyon. Theor Appl Genet 113: 186-195. (Pubitemid 43961551)
-
(2006)
Theoretical and Applied Genetics
, vol.113
, Issue.2
, pp. 186-195
-
-
Vogel, J.P.1
Gu, Y.Q.2
Twigg, P.3
Lazo, G.R.4
Laudencia-Chingcuanco, D.5
Hayden, D.M.6
Donze, T.J.7
Vivian, L.A.8
Stamova, B.9
Coleman-Derr, D.10
-
24
-
-
38549146894
-
The Pfam protein families database
-
DOI 10.1093/nar/gkm960
-
Finn RD, Tate J, Mistry J, Coggill PC, Sammut SJ, et al. (2008) The Pfam protein families database. Nucleic Acids Res 36: D281-D288. (Pubitemid 351149737)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.SUPPL. 1
-
-
Finn, R.D.1
Tate, J.2
Mistry, J.3
Coggill, P.C.4
Sammut, S.J.5
Hotz, H.-R.6
Ceric, G.7
Forslund, K.8
Eddy, S.R.9
Sonnhammer, E.L.L.10
Bateman, A.11
-
25
-
-
0030681260
-
The significance of digital gene expression profiles
-
Audic S, Claverie JM (1997) The significance of digital gene expression profiles. Genome Res 7: 986-995. (Pubitemid 27487763)
-
(1997)
Genome Research
, vol.7
, Issue.10
, pp. 986-995
-
-
Audic, S.1
Claverie, J.-M.2
-
26
-
-
0035733108
-
The control of the false discovery rate in multiple testing under dependency
-
DOI 10.1214/aos/1013699998
-
Benjamini Y, Yekutieli D (2001) The control of the false discovery rate in multiple testing under dependency. The Annals of Statistics 29: 1165-1188. (Pubitemid 33575263)
-
(2001)
Annals of Statistics
, vol.29
, Issue.4
, pp. 1165-1188
-
-
Benjamini, Y.1
Yekutieli, D.2
-
27
-
-
0345863935
-
The KEGG resource for deciphering the genome
-
Kanehisa M, Goto S, Kawashima S, Okuno Y, Hattori M (2004) The KEGG resource for deciphering the genome. Nucleic Acids Res 32: 277-280.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 277-280
-
-
Kanehisa, M.1
Goto, S.2
Kawashima, S.3
Okuno, Y.4
Hattori, M.5
-
28
-
-
33847389939
-
Partial silencing of a hydroxy-methylglutaryl-CoA reductase-encoding gene in Trichoderma harzianum CECT 2413 results in a lower level of resistance to lovastatin and lower antifungal activity
-
DOI 10.1016/j.fgb.2006.11.013, PII S1087184506002118
-
Cardoza R E, Hermosa M R, Vizcai'no J A, Gonza'lez F, Llobell A, et al. (2007) Partial silencing of a hydroxy-methylglutaryl-CoA reductase-encoding gene in Trichoderma harzianum CECT 2413 results in a lower level of resistance to lovastatin and lower antifungal activity. Fungal Genet Biol 44:269-283. (Pubitemid 46335883)
-
(2007)
Fungal Genetics and Biology
, vol.44
, Issue.4
, pp. 269-283
-
-
Cardoza, R.E.1
Hermosa, M.R.2
Vizcaino, J.A.3
Gonzalez, F.4
Llobell, A.5
Monte, E.6
Gutierrez, S.7
-
29
-
-
57749175974
-
Thctf1 transcription factor of Trichoderma harzianum is involved in 6-pentyl-2H- pyran-2 - One production and antifungal activity
-
Rubio MB, Hermosa R, Reino JL, Collado IG, Monte E (2009) Thctf1 transcription factor of Trichoderma harzianum is involved in 6-pentyl-2H- pyran-2 - one production and antifungal activity. Fungal Genet Biol 46:17-27.
-
(2009)
Fungal Genet Biol
, vol.46
, pp. 17-27
-
-
Rubio, M.B.1
Hermosa, R.2
Reino, J.L.3
Collado, I.G.4
Monte, E.5
-
30
-
-
84899436971
-
-
website. Available: Accessed 2013 November 15
-
JGI website. Available: http://genome.jgi.doe.gov. Accessed 2013 November 15.
-
-
-
-
31
-
-
0021222728
-
Toxicological features of T-2 toxin and related trichothecenes
-
UenoY (1984) Toxicological features of T-2 toxin and related trichothecenes. Fundam Appl Toxicol 4: 124-132.
-
(1984)
Fundam Appl Toxicol
, vol.4
, pp. 124-132
-
-
Ueno, Y.1
-
32
-
-
0021985348
-
The toxicology of mycotoxins
-
Ueno Y (1985) The toxicology of mycotoxins. CRS Crit Rev Toxicol 14: 99-132.
-
(1985)
CRS Crit Rev Toxicol
, vol.14
, pp. 99-132
-
-
Ueno, Y.1
-
33
-
-
27644541909
-
Trichothecene production by Trichoderma brevicompactum
-
DOI 10.1021/jf051279b
-
Nielsen KF, Grafenhan T, Zafari D, Thrane U (2005) Trichothecene Production by Trichoderma brevicompactum. J Agric Food Chem 53: 8190-8196. (Pubitemid 41564625)
-
(2005)
Journal of Agricultural and Food Chemistry
, vol.53
, Issue.21
, pp. 8190-8196
-
-
Nielsen, K.F.1
Grafenhan, T.2
Zafari, D.3
Thrane, U.4
|