Fluorene biodegradation and identification of transformation products by white-rot fungus Armillaria sp. F022

Biodegradation

Volumn 25, Issue 3, 2014, Pages 373-382

  Hadibarata, Tony ^a   Kristanti, Risky Ayu ^b  

^a UNIVERSITI TEKNOLOGI MALAYSIA   (Malaysia)

^b OSAKA UNIVERSITY   (Japan)

Author keywords

9 Fluorenone; Armillaria sp. F022; Fluorene biotransformation; Ligninolytic enzymes; Pathway

Indexed keywords

BIOREMEDIATION; CARBOXYLATION; CATIONIC SURFACTANTS; DYES; ENZYMES; EXPERIMENTS; KETONES; MICROBIOLOGY; SOIL POLLUTION;

9-FLUORENONE; ARMILLARIA SP. F022; FLUORENES; LIGNINOLYTIC ENZYMES; PATHWAY;

BIODEGRADATION;

BIODEGRADATION; BIOREMEDIATION; CONCENTRATION (COMPOSITION); ENZYME ACTIVITY; FUNGUS; GROWTH RATE; METABOLITE; PAH; SOIL AMENDMENT; SURFACTANT;

9-FLUORENONE; CATECHOL; CATECHOL DERIVATIVE; FLUORENE; FLUORENE DERIVATIVE; FUNGAL PROTEIN; GLYCOLIPID; LACCASE; RHAMNOLIPID; SALICYLIC ACID; SOIL POLLUTANT; SURFACTANT;

ARMILLARIA; BIOREMEDIATION; BIOSYNTHESIS; BIOTRANSFORMATION; DRUG EFFECTS; METABOLISM; SOIL POLLUTANT;

ARMILLARIA; BIODEGRADATION, ENVIRONMENTAL; BIOTRANSFORMATION; CATECHOLS; FLUORENES; FUNGAL PROTEINS; GLYCOLIPIDS; LACCASE; SALICYLIC ACID; SOIL POLLUTANTS; SURFACE-ACTIVE AGENTS;

EID: 84899005377     PISSN: 09239820     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10532-013-9666-x     Document Type: Article

References (34)

1. Arun A, Eyini M (2011) Comparative studies on lignin and polycyclic aromatic hydrocarbons degradation by basidiomycetes fungi. Bioresour Technol 102: 8063-8070.
2. Boyd DR, Sheldrake GN (1998) The dioxygenase-catalyzed formation of vicinal cis-diols. Nat Prod Rep 15: 309-324.
3. Chan LC, Lee JJ, Park JW (2002) Solubilization of PAH mixtures by three different anionic surfactants. Environ Pollut 118: 307-313.
4. Chang W, Um Y, Holoman TRP (2006) Polycyclic aromatic hydrocarbon (PAH) degradation coupled the methanogenesis. Biotechnol Lett 28: 425-430.
5. Dean-Ross D, Cerniglia CE (1996) Degradation of pyrene by Mycobacterium flavescens. Appl Microbiol Biotechnol 46: 307-312.
6. Efroymson RA, Alexander M (1991) Biodegradation by an arthrobacter species of hydrocarbons partitioned into an organic solvent. Appl Environ Microbiol 57: 1441-1447.
7. Filonov AE, Puntus IF, Karpov AV, Kosheleva IA, Akhmetov LI, Yonge D, Petersen J, Boronin AM (2006) Assessment of naphthalene biodegradation efficiency provided by microorganisms of genera Pseudomonas and Burkholderia in soil model systems. J Chem Technol Biotechnol 81: 216-224.
8. Ghosh MM, Yeom ITM, Shi Z, Cox CD, Robinson KG (1995) Microbial processes for bioremediation. Battelle Press Columbus, USA.
9. Grifoll M, Selifonov SA, Chapman PJ (1994) Evidence for a novel pathway in the degradation of fluorene by Pseudomonas sp. Strain F274. Appl Environ Microbiol 60: 2438-2449.
10. Hadibarata T, Tachibana S, Itoh K (2007a) Biodegradation of phenanthrene by fungi screened from nature. Pak J Biol Sci 10: 2535-2543.
11. Hadibarata T, Tachibana S, Itoh K (2007b) Biodegradation of n-eicosane by fungi screened from nature. Pak J Biol Sci 10: 1804-1810.
12. Hadibarata T, Kristanti RA (2012) Identification of metabolites from benzo[a]pyrene oxidation by ligninolytic enzymes of Polyporus sp. S133. J Environ Manag 111: 115-119.
13. Hadibarata T, Kristanti RA (2013) Biodegradation and metabolite transformation of pyrene by basidiomycetes fungal isolate Armillaria sp. F022. Bioprocess Biosyst Eng 36: 461-468.
14. Hadibarata T, Tachibana S, Askari M (2011) Identification of metabolites from phenanthrene oxidation by phenoloxidases and dioxygenases of Polyporus sp. S133. J Microbiol Biotechnol 21: 299-304.
15. Hadibarata T, Yusoff ARM, Kristanti RA (2012a) Decolorization and metabolism of anthraquionone-type dye by laccase of white-rot fungi Polyporus sp. S133. Water Air Soil Pollut 223: 933-941.
16. Hadibarata T, Yusoff ARM, Aris A, Kristanti RA (2012b) Identification of naphthalene metabolism by white rot fungus Armillaria sp. F022. J Environ Sci 24: 728-732.
17. Jin D, Juang X, Jing X, Ou Z (2007) Effect of concentration, head group, and structure of surfactants on the degradation of phenanthrene. J Hazard Mater 144: 215-221.
18. Kim IS, Park JS, Kim KW (2001) Enhanced biodegradation of polycyclic aromatic hydrocarbons using non-ionic surfactants in soil slurry. Appl Geochem 16: 1419-1429.
19. Kristanti RA, Hadibarata T, Toyama T, Tanaka Y, Mori K (2011) Bioremediation of crude oil by white rot fungi Polyporus sp. S133. J Microbiol Biotechnol 21: 995-1000.
20. Kristanti RA, Kambe M, Hadibarata T, Toyama T, Tanaka Y, Mori K (2012) Isolation and characterization of 3-nitrophenol-degrading bacteria associated with rhizosphere of Spirodela polyrrhiza. Environ Sci Pollut Res Int 19: 1852-1858.
21. Laha S, Luthy RG (1992) Effects of non-ionic surfactants on the solubilization and mineralization of phenanthrene in soil-water systems. Biotechnol Bioeng 40: 1367-1380.
22. Li JL, Chen BH (2009a) Effect of non-ionic surfactants on biodegradation of phenanthrene by a marine bacteria of Neptunomonas naphthovorans. J Hazard Mat 162: 66-73.
23. Li JL, Chen BH (2009b) Surfactant-mediated biodegradation of polycyclic aromatic hydrocarbons. Materials 2: 76-94.
24. Luning Prak DJ, Pritchard PH (2002) Solubilization of polycyclic aromatichydrocarbon mixtures in micellar non-ionic surfactant solution. Water Res 36: 3463-3472.
25. Moreira IS, Amorim CL, Carvalho MF, Castro PM (2012) Degradation of difluorobenzenes by the wild strain Labrys portucalensis. Biodegradation 23: 653-662.
26. Neu TR (1996) Significance of bacterial surface-active compounds in interaction of bacteria with interfaces. Microbiol Rev 60: 151-166.
27. Puntus IF, Filonov AE, Akhmetov LI, Karpov AV, Boronin AM (2008) Phenanthrene degradation by bacteria of the genera Pseudomonas and Burkholderia in model soil systems. Microbiology 77: 7-15.
28. Rijnaarts HHM, Bachmann A, Jumelet JC, Zehnder JB (1990) Effect of desorption and intraparticle mass transfer on the aerobic biomineralization of a-hexachlorocyclohexane in a contaminated calcareous soil. Environ Sci Technol 24: 1349-1354.
29. Rodrigues AC, Wuertz S, Brito AG, Melo LF (2005) Fluorene and phenanthrene uptake by Pseudomonas putida ATCC 17514: kinetics and physiological aspects. Biotechnol Bioeng 90: 281-289.
30. Satsangee R, Ghosh P (1990) Anaerobic degradation of phenol using an acclimated mixed culture. Appl Microbiol Biotechnol 34: 127-130.
31. Thibault SL, Anderson M, Frankenberger WT (1996) Influence of surfactants on pyrene desorption and degradation in soils. Appl Environ Microbiol 62: 283-287.
32. Tiehm A (1994) Degradation of polycyclic aromatic hydrocarbons in the presence of synthetic surfactants. Appl Environ Microbiol 60: 258-263.
33. Trenz SP, Engesser KH, Fisher P, Knackmus H (1994) Degradation of fluorene by Brevibacterium sp. Strain DPO 1361: a novel C-C bond cleavage mechanism via 1, 10-dihydroxyfluorene-9-on. J Bacteriol 176: 789-795.
34. Tsai JC, Kumar M, Lin JG (2009) Anaerobic biotransformation of fluorene and phenanthrene by sulfate-reducing bacteria and identification of biotransformation pathway. J Hazard Mater 164: 847-855.