Estimation of sensitivity and specificity of bacteriology, histopathology and PCR for the confirmatory diagnosis of bovine tuberculosis using latent class analysis

PLoS ONE

Volumn 9, Issue 3, 2014, Pages

  Courcoul, Aurélie ^a   Moyen, Jean Louis ^b   Brugère, Laure ^b   Faye, Sandy ^b   Hénault, Sylvie ^c   Gares, Hélène ^b   Boschiroli, Maria Laura ^c  

^a ANSES   (France)

^b Regional Analysis and Research Laboratory of Dordogne (LDAR24)   (France)

^c FRENCH AGENCY FOR FOOD   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL TISSUE; ARTICLE; BACTERIOLOGY; BACTERIUM CULTURE; BAYESIAN LEARNING; BOVINE TUBERCULOSIS; CATTLE; CONTROLLED STUDY; DIAGNOSTIC KIT; DIAGNOSTIC TEST ACCURACY STUDY; FEMALE; HISTOPATHOLOGY; INCIDENCE; LATENT PERIOD; MALE; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; ANIMAL; BACTERIAL GENE; BAYES THEOREM; BOVINE; FRANCE; MICROBIOLOGICAL EXAMINATION; MICROBIOLOGY; MYCOBACTERIUM BOVIS; PROCEDURES; REPRODUCIBILITY; SLAUGHTERHOUSE; TUBERCULOSIS, BOVINE;

ABATTOIRS; ANIMALS; BACTERIOLOGICAL TECHNIQUES; BAYES THEOREM; CATTLE; FEMALE; FRANCE; GENES, BACTERIAL; MALE; MYCOBACTERIUM BOVIS; POLYMERASE CHAIN REACTION; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; TUBERCULOSIS, BOVINE;

EID: 84898754015     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0090334     Document Type: Article

References (26)

1. Schiller I, RayWaters W, Vordermeier HM, Jemmi T, Welsh M, et al. (2011) Bovine tuberculosis in Europe from the perspective of an officially tuberculosis free country: trade, surveillance and diagnostics. Vet Microbiol 151: 153-159.
2. Clegg TA, Duignan A, Whelan C, Gormley E, Good M, et al. (2011) Using latent class analysis to estimate the test characteristics of the gamma-interferon test, the single intradermal comparative tuberculin test and a multiplex immunoassay under Irish conditions. Vet Microbiol 151: 68-76.
3. de la Rua-Domenech R, Goodchild AT, Vordermeier HM, Hewinson RG, Christiansen KH, et al. (2006) Ante mortem diagnosis of tuberculosis in cattle: a review of the tuberculin tests, gamma-interferon assay and other ancillary diagnostic techniques. Res Vet Sci 81: 190-210. (Pubitemid 43905909)
4. Karolemeas K, de la Rua-Domenech R, Cooper R, Goodchild AV, Clifton-Hadley RS, et al. (2012) Estimation of the relative sensitivity of the comparative tuberculin skin test in tuberculous cattle herds subjected to depopulation. PLoS One 7: e43217.
5. Varello K, Pezzolato M, Mascarino D, Ingravalle F, Caramelli M, et al. (2008) Comparison of histologic techniques for the diagnosis of bovine tuberculosis in the framework of eradication programs. J Vet Diagn Invest 20: 164-169.
6. Branscum AJ, Gardner IA, Johnson WO (2005) Estimation of diagnostic-test sensitivity and specificity through Bayesian modeling. Prev Vet Med 68: 145-163. (Pubitemid 40451867)
7. Hui SL, Walter SD (1980) Estimating the error rates of diagnostic tests. Biometrics 36: 167-171.
8. Paul S, Toft N, Agerholm JS, Christoffersen AB, Agger JF (2013) Bayesian estimation of sensitivity and specificity of Coxiella burnetii antibody ELISA tests in bovine blood and milk. Prev Vet Med 109: 258-263.
9. Toft N, Akerstedt J, Tharaldsen J, Hopp P (2007) Evaluation of three serological tests for diagnosis of Maedi-Visna virus infection using latent class analysis. Vet Microbiol 120: 77-86. (Pubitemid 46149219)
10. Thierry D, Brisson-Noel A, Vincent-Levy-Frebault V, Nguyen S, Guesdon JL, et al. (1990) Characterization of a Mycobacterium tuberculosis insertion sequence, IS6110, and its application in diagnosis. J Clin Microbiol 28: 2668-2673.
11. OIE (2012) Bovine tuberculosis Chap 2.4.7. In: OIE, editor. Manual of diagnostic tests and vaccines for terrestrial animals (mammals, birds and bees). 7 ed. Paris. 674-689.
12. Henault S, Karoui C, Boschiroli ML (2006) A PCR-based method for tuberculosis detection in wildlife. Dev Biol (Basel) 126: 123-132; discussion 325-126.
13. Zhang J, Abadia E, Refregier G, Tafaj S, Boschiroli ML, et al. (2010) Mycobacterium tuberculosis complex CRISPR genotyping: improving efficiency, throughput and discriminative power of 'spoligotyping' with new spacers and a microbead-based hybridization assay. J Med Microbiol 59: 285-294.
14. Enoe C, Georgiadis MP, Johnson WO (2000) Estimation of sensitivity and specificity of diagnostic tests and disease prevalence when the true disease state is unknown. Prev Vet Med 45: 61-81. (Pubitemid 30308340)
15. Gardner IA, Stryhn H, Lind P, Collins MT (2000) Conditional dependence between tests affects the diagnosis and surveillance of animal diseases. Prev Vet Med 45: 107-122. (Pubitemid 30308342)
16. Jones G, Johnson WO, Hanson TE, Christensen R (2010) Identifiability of models for multiple diagnostic testing in the absence of a gold standard. Biometrics 66: 855-863.
17. Lunn D, Spiegelhalter D, Thomas A, Best N (2009) The BUGS project: Evolution, critique, and future directions. Statistics in Medicine 28: 3049-3067.
18. Gardner IA, Nielsen SS, Whittington RJ, Collins MT, Bakker D, et al. (2011) Consensus-based reporting standards for diagnostic test accuracy studies for paratuberculosis in ruminants. Prev Vet Med 101: 18-34.
19. Toft N, Jorgensen E, Hojsgaard S (2005) Diagnosing diagnostic tests: evaluating the assumptions underlying the estimation of sensitivity and specificity in the absence of a gold standard. Prev Vet Med 68: 19-33. (Pubitemid 40413299)
20. Johnson WO, Gardner IA, Metoyer CN, Branscum AJ (2009) On the interpretation of test sensitivity in the two-test two-population problem: assumptions matter. Prev Vet Med 91: 116-121.
21. Parra A, Garcia N, Garcia A, Lacombe A, Moreno F, et al. (2008) Development of a molecular diagnostic test applied to experimental abattoir surveillance on bovine tuberculosis. Vet Microbiol 127: 315-324. (Pubitemid 351192955)
22. Taylor GM, Worth DR, Palmer S, Jahans K, Hewinson RG (2007) Rapid detection of Mycobacterium bovis DNA in cattle lymph nodes with visible lesions using PCR. BMC Vet Res 3: 12.
23. Thacker TC, Harris B, Palmer MV, Waters WR (2011) Improved specificity for detection of Mycobacterium bovis in fresh tissues using IS6110 real-time PCR. BMC Vet Res 7: 50.
24. Proaño-Perez F, Benitez-Ortiz W, Desmecht D, Coral M, Ortiz J, et al. (2011) Post-mortem examination and laboratory-based analysis for the diagnosis of bovine tuberculosis among dairy cattle in Ecuador. Prev Vet Med 101: 65-72.
25. Cardoso MA, Cardoso RF, Hirata RD, Hirata MH, Leite CQ, et al. (2009) Direct detection of Mycobacterium bovis in bovine lymph nodes by PCR. Zoonoses Public Health 56: 465-470.
26. Corner LA, Gormley E, Pfeiffer DU (2012) Primary isolation of Mycobacterium bovis from bovine tissues: conditions for maximising the number of positive cultures. Vet Microbiol 156: 162-171.