Genome sequence of a novel HIV-1 circulating recombinant form (CRF57-BC) identified from Yunnan, China

AIDS Research and Human Retroviruses

Volumn 30, Issue 4, 2014, Pages 384-388

  Wei, Huamian ^a   Liu, Yongjian ^b   Feng, Yi ^a   Hsi, Jenny ^a   Xing, Hui ^a   He, Xiang ^a,c   Liao, Lingjie ^a   Yutaka, Takebe ^a,d   Li, Jingyun ^b   Shao, Yiming ^a  

^a CHINESE CENTER FOR DISEASE CONTROL AND PREVENTION   (China)

^b BEIJING INSTITUTE OF MICROBIOLOGY AND EPIDEMIOLOGY   (China)

^c Guangdong Provincial Institute of Nephrology   (China)

^d NATIONAL INSTITUTE OF INFECTIOUS DISEASES   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

GAG PROTEIN;

ADULT; ARTICLE; CHINA; CLINICAL ARTICLE; FEMALE; GENE SEQUENCE; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS 1 (STRAIN 09CN YNFL37); HUMAN IMMUNODEFICIENCY VIRUS 1 (STRAIN 10CN DHFL17); INDIA; MALE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PRIORITY JOURNAL; UNINDEXED SEQUENCE; VIRUS GENOME; VIRUS IDENTIFICATION; VIRUS RECOMBINANT; VIRUS STRAIN; YOUNG ADULT; PHYLOGENY; VIRUS TRANSMISSION; VIRUS TYPING;

ADULT; CHINA; CLUSTER ANALYSIS; EVOLUTION, MOLECULAR; GENOME, VIRAL; GENOTYPE; HIV INFECTIONS; HIV-1; HUMANS; MIDDLE AGED; MOLECULAR SEQUENCE DATA; PHYLOGENY; RECOMBINATION, GENETIC; RNA VIRUSES; RNA, VIRAL; SEQUENCE ANALYSIS, DNA;

EID: 84898734769     PISSN: 08892229     EISSN: 19318405     Source Type: Journal    
DOI: 10.1089/aid.2013.0228     Document Type: Article

References (8)

1. He X, Xing H, Ruan Y, et al.: A comprehensive mapping of HIV-1 genotypes in various risk groups and regions across China based on a nationwide molecular epidemiologic survey. PLoS One 2012;7(10):e47289.
2. Yang R, Kusagawa S, Zhang C, Xia X, Ben K, and Takebe Y: Identification and characterization of a new class of human immunodeficiency virus type 1 recombinants comprised of two circulating recombinant forms, CRF07-BC and CRF08-BC, in China. J Virol 2003;77(1):685-695. (Pubitemid 36005005)
3. Li L, Chen L, Yang S, et al.: Recombination form and epidemiology of HIV-1 unique recombinant strains identified in Yunnan, China. PLoS One 2012;7(10):e46777.
4. Wei H, Su L, Feng Y, et al.: Near full-length genomic characterization of a novel HIV type 1 CRF07-BC/01-AE recombinant in men who have sex with men from Sichuan, China. AIDS Res Hum Retroviruses 2013;29(8):1173-1176.
5. Hall TA: BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Paper presented at the Nucleic Acids Symposium Series 1999.
6. Tamura K, Dudley J, Nei M, and Kumar S: MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 2007;24(8):1596-1599. (Pubitemid 47236692)
7. Liu Y, Li L, Yang S, et al.: Identification and characterization of two new HIV type 1 unique (B/C) recombinant forms in China. AIDS Res Hum Retroviruses 2011;27(4): 445-451.
8. Tee KK, Pybus OG, Li XJ, et al.: Temporal and spatial dynamics of human immunodeficiency virus type 1 circulating recombinant forms 08-BC and 07-BC in Asia. J Virol 2008;82(18):9206-9215.