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Volumn 9, Issue 3, 2014, Pages

Genetic characterization of a novel iflavirus associated with vomiting disease in the chinese oak silkmoth antheraea pernyi

Author keywords

[No Author keywords available]

Indexed keywords

PROTEINASE; RNA POLYMERASE;

EID: 84898651744     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0092107     Document Type: Article
Times cited : (25)

References (40)
  • 1
    • 84898647509 scopus 로고    scopus 로고
    • A study on antheraea pernyi vomit disease in china
    • Ce S (2005) A study on Antheraea pernyi Vomit Disease in China. Liaoning Agricultural Sciences 4: 39-41
    • (2005) Liaoning Agricultural Sciences , vol.4 , pp. 39-41
    • Ce, S.1
  • 3
  • 4
    • 33751441296 scopus 로고    scopus 로고
    • In vitro and in vivo identification of structural and sequence elements in the 5′ untranslated region of Ectropis obliqua picorna-like virus required for internal initiation
    • DOI 10.1099/vir.0.82090-0
    • Lu J, Zhang J, Wang X, Jiang H, Liu C, Hu Y (2006) In vitro and in vivo identification of structural and sequence elements in the 59 untranslated region of Ectropis obliqua picorna-like virus required for internal initiation. J Gen Virol 87(Pt 12): 3667-3677 (Pubitemid 44817001)
    • (2006) Journal of General Virology , vol.87 , Issue.12 , pp. 3667-3677
    • Lu, J.1    Zhang, J.2    Wang, X.3    Jiang, H.4    Liu, C.5    Hu, Y.6
  • 5
    • 33750275762 scopus 로고    scopus 로고
    • The 5′ non-translated region of Varroa destructor virus 1 (genus Iflavirus): Structure prediction and IRES activity in Lymantria dispar cells
    • DOI 10.1099/vir.0.82122-0
    • Ongus JR, Roode EC, Pleij CW, Vlak JM, van Oers MM (2006) The 59 nontranslated region of Varroa destructor virus 1 (genus Iflavirus): structure prediction and IRES activity in Lymantria dispar cells. J Gen Virol 87: 3397-3407 (Pubitemid 44608378)
    • (2006) Journal of General Virology , vol.87 , Issue.11 , pp. 3397-3407
    • Ongus, J.R.1    Roode, E.C.2    Pleij, C.W.A.3    Vlak, J.M.4    Van Oers, M.M.5
  • 6
    • 59749083132 scopus 로고    scopus 로고
    • An atypical IRES within the 59UTR of a dicistrovirus genome
    • Roberts LO, Grappelli E (2009) An atypical IRES within the 59UTR of a dicistrovirus genome. Virus Research 139: 157-165
    • (2009) Virus Research , vol.139 , pp. 157-165
    • Roberts, L.O.1    Grappelli, E.2
  • 7
    • 0033591465 scopus 로고    scopus 로고
    • Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
    • DOI 10.1006/jmbi.1999.2700
    • Mathews DH, Sabina J, Zuker M, Turner DH (1999) Expanded sequence dependence of thermodynamic parameters improves predictionof RNA secondary structure. J Mol Biol 288: 911-940 (Pubitemid 29248642)
    • (1999) Journal of Molecular Biology , vol.288 , Issue.5 , pp. 911-940
    • Mathews, D.H.1    Sabina, J.2    Zuker, M.3    Turner, D.H.4
  • 8
    • 0037314114 scopus 로고    scopus 로고
    • Rna Viz 2: An improved representation of RNA secondary structure
    • DOI 10.1093/bioinformatics/19.2.299
    • De Rijk P, Wuyts J, De Wachter R (2003) RnaViz 2: animproved representation of RNA secondary structure. Bioinformatics 19: 299-300 (Pubitemid 36181922)
    • (2003) Bioinformatics , vol.19 , Issue.2 , pp. 299-300
    • De Rijk, P.1    Wuyts, J.2    De Wachter, R.3
  • 10
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M,et al.. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731-2739
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5
  • 11
    • 0345742599 scopus 로고    scopus 로고
    • Novel insect picorna-like virus identified in the brains of aggressive worker honeybees
    • DOI 10.1128/JVI.78.3.1093-1100.2004
    • Fujiyuki T, Takeuchi H, Ono M, Ohka S, Sasaki T,et al.. (2004) Novel insect picorna-like virus identified in the brains of aggressive worker honeybees. J Virol 78: 1093-1100 (Pubitemid 38095819)
    • (2004) Journal of Virology , vol.78 , Issue.3 , pp. 1093-1100
    • Fujiyuki, T.1    Takeuchi, H.2    Ono, M.3    Ohka, S.4    Sasaki, T.5    Nomoto, A.6    Kubo, T.7
  • 12
    • 33646445454 scopus 로고    scopus 로고
    • Molecular and biological characterization of deformed wing virus of honeybees (Apis mellifera L
    • Lanzi G, de Miranda JR, Boniotti MB, Cameron CE, Lavazza A,et al.. (2006) Molecular and biological characterization of deformed wing virus of honeybees (Apis mellifera L.). J Virol 80: 4998-5009
    • (2006) J Virol , vol.80 , pp. 4998-5009
    • Lanzi, G.1    De Miranda, J.R.2    Boniotti, M.B.3    Cameron, C.E.4    Lavazza, A.5
  • 13
    • 9944252333 scopus 로고    scopus 로고
    • Complete sequence of a picorna-like virus of the genus Iflavirus replicating in the mite Varroa destructor
    • DOI 10.1099/vir.0.80470-0
    • Ongus JR, Peters D, Bonmatin JM, Bengsch E, Vlak JM,et al.. (2004) Complete sequence of a picorna-like virus of the genus Iflavirus replicating in the mite Varroa destructor. J Gen Virol 85: 3747-3755 (Pubitemid 39591882)
    • (2004) Journal of General Virology , vol.85 , Issue.12 , pp. 3747-3755
    • Ongus, J.R.1    Peters, D.2    Bonmatin, J.-M.3    Bengsch, E.4    Vlak, J.M.5    Van Oers, M.M.6
  • 14
    • 0029025444 scopus 로고
    • Immunization with viruslike particles from cottontail rabbit papillomavirus (CRPV) can protect against experimental CRPV infection
    • Breitburd F, Kirnbauer R, Hubbert NL, Nonnenmacher B, Trin-Dinh- Desmarquet C,et al.. (1995) Immunization with viruslike particles from cottontail rabbit papillomavirus (CRPV) can protect against experimental CRPV infection. J Virol 69: 3959-3963
    • (1995) J Virol , vol.69 , pp. 3959-3963
    • Breitburd, F.1    Kirnbauer, R.2    Hubbert, N.L.3    Nonnenmacher, B.4    Trin-Dinh-Desmarquet, C.5
  • 15
    • 0025261685 scopus 로고
    • A new superfamily of putative NTP-binding domains encoded by genomes of small DNA and RNA viruses
    • DOI 10.1016/0014-5793(90)80175-I
    • Gorbalenya AE, Koonin EV, Wolf YI (1990) A new superfamily of putative NTP-binding domains encoded by genomes of small DNA and RNA viruses. FEBS Lett 262: 145-148 (Pubitemid 20104282)
    • (1990) FEBS Letters , vol.262 , Issue.1 , pp. 145-148
    • Gorbalenya, A.E.1    Koonin, E.V.2    Wolf, Y.I.3
  • 16
    • 84860841309 scopus 로고    scopus 로고
    • Identification and characterization of Iflavirus 3C-like protease processing activities
    • Ye S, Xia H, Dong C, Cheng Z, Xia X,et al.. (2012) Identification and characterization of Iflavirus 3C-like protease processing activities. Virology 428: 136-145
    • (2012) Virology , vol.428 , pp. 136-145
    • Ye, S.1    Xia, H.2    Dong, C.3    Cheng, Z.4    Xia, X.5
  • 17
    • 0025743809 scopus 로고
    • The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses
    • Koonin EV (1991) The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses. J Gen Virol 72 (Pt 9): 2197-2206
    • (1991) J Gen Virol , vol.72 PART 9 , pp. 2197-2206
    • Koonin, E.V.1
  • 18
    • 0027504136 scopus 로고
    • Evolution and taxonomy of positive-strand RNA viruses: Implications of comparative analysis of amino acid sequences
    • Koonin EV, Dolja VV (1993) Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences. Crit Rev Biochem Mol Biol 28: 375-430 (Pubitemid 23294324)
    • (1993) Critical Reviews in Biochemistry and Molecular Biology , vol.28 , Issue.5 , pp. 375-430
    • Koonin, E.V.1    Dolja, V.V.2
  • 19
    • 40849142241 scopus 로고    scopus 로고
    • The use of RNA-dependent RNA polymerase for the taxonomic assignment of Picorna-like viruses (order Picornavirales) infecting Apis mellifera L
    • Baker AC, Schroeder DC (2008) The use of RNA-dependent RNA polymerase for the taxonomic assignment of Picorna-like viruses (order Picornavirales) infecting Apis mellifera L. populations. Virol J 5: 10
    • (2008) Populations. Virol J , vol.5 , pp. 10
    • Baker, A.C.1    Schroeder, D.C.2
  • 20
    • 0029840630 scopus 로고    scopus 로고
    • A reevaluation of the higher taxonomy of viruses based on RNA polymerases
    • Zanotto PM, Gibbs MJ, Gould EA, Holmes EC (1996) A reevaluation of the higher taxonomy of viruses based on RNA polymerases. J Virol 70: 6083-6096 (Pubitemid 26266824)
    • (1996) Journal of Virology , vol.70 , Issue.9 , pp. 6083-6096
    • Zanotto, P.M.D.A.1    Gibbs, M.J.2    Gould, E.A.3    Holmes, E.C.4
  • 21
    • 2442712545 scopus 로고    scopus 로고
    • Sequence analysis and genomic organization of a new insect picorna-like virus, Ectropis obliqua picorna-like virus, isolated from Ectropis obliqua
    • DOI 10.1099/vir.0.19638-0
    • Wang X, Zhang J, Lu J, Yi F, Liu C,et al.. (2004) Sequence analysis and genomic organization of a new insect picorna-like virus, Ectropis obliqua picorna-like virus, isolated from Ectropis obliqua. J Gen Virol 85: 1145-1151 (Pubitemid 38659778)
    • (2004) Journal of General Virology , vol.85 , Issue.5 , pp. 1145-1151
    • Wang, X.1    Zhang, J.2    Lu, J.3    Yi, F.4    Liu, C.5    Hu, Y.6
  • 22
    • 34250170861 scopus 로고    scopus 로고
    • The 59 untranslated region of Perina nuda virus (PnV) possesses a strong internal translation activity in baculovirus-infected insect cells
    • Wu TY, Wu CY, Chen YJ, Chen CY, Wang CH (2007) The 59 untranslated region of Perina nuda virus (PnV) possesses a strong internal translation activity in baculovirus-infected insect cells. FEBS Lett 581: 3120-3126
    • (2007) FEBS Lett , vol.581 , pp. 3120-3126
    • Wu, T.Y.1    Wu, C.Y.2    Chen, Y.J.3    Chen, C.Y.4    Wang, C.H.5
  • 24
    • 78651259526 scopus 로고    scopus 로고
    • Recombinants between deformed wing virus and varroa destructor virus-1 may prevail in varroa destructor-infested honeybee colonies
    • Moore J, Jironkin A, Chandler D, Burroughs N, Evans DJ,et al.. (2011) Recombinants between Deformed wing virus and Varroa destructor virus-1 may prevail in Varroa destructor-infested honeybee colonies. J Gen Virol 92: 156-161
    • (2011) J Gen Virol , vol.92 , pp. 156-161
    • Moore, J.1    Jironkin, A.2    Chandler, D.3    Burroughs, N.4    Evans, D.J.5
  • 25
    • 57349192096 scopus 로고    scopus 로고
    • Detection of a honeybee iflavirus with intermediate characteristics between kakugo virus and deformed wing virus
    • Terio V, Martella V, Camero M, Decaro N, Testini G,et al.. (2008) Detection of a honeybee iflavirus with intermediate characteristics between kakugo virus and deformed wing virus. New Microbiol 31: 439-444
    • (2008) New Microbiol , vol.31 , pp. 439-444
    • Terio, V.1    Martella, V.2    Camero, M.3    Decaro, N.4    Testini, G.5
  • 26
    • 84898663228 scopus 로고    scopus 로고
    • In S. Asgari J, K.N., editor. Insect Virology Caister: Norfolk Academic Press
    • Bonning B (2010) Dicistroviridae. In: In S. Asgari J, K.N., editor. Insect Virology Caister: Norfolk: Academic Press
    • (2010) Dicistroviridae
    • Bonning, B.1
  • 27
    • 30744446533 scopus 로고    scopus 로고
    • Effective control of a field population of Helicoverpa armigera by using the small RNA virus Helicoverpa armigera stunt virus (Tetraviridae: Omegatetravirus)
    • Christian PD, Murray D, Powell R, Hopkinson J, Gibb NN,et al.. (2005) Effective control of a field population of Helicoverpa armigera by using the small RNA virus Helicoverpa armigera stunt virus (Tetraviridae: Omegatetravirus). Journal of Economic Entomology 98: 1839-1847 (Pubitemid 43094524)
    • (2005) Journal of Economic Entomology , vol.98 , Issue.6 , pp. 1839-1847
    • Christian, P.D.1    Murray, D.2    Powell, R.3    Hopkinson, J.4    Gibb, N.N.5    Hanzlik, T.N.6
  • 28
    • 77956825607 scopus 로고    scopus 로고
    • Genetic characterization of slow bee paralysis virus of the honeybee (Apis mellifera L
    • de Miranda JR, Dainat B, Locke B, Cordoni G, Berthoud H,et al.. (2010) Genetic characterization of slow bee paralysis virus of the honeybee (Apis mellifera L.). J Gen Virol 91: 2524-2530
    • (2010) J Gen Virol , vol.91 , pp. 2524-2530
    • De Miranda, J.R.1    Dainat, B.2    Locke, B.3    Cordoni, G.4    Berthoud, H.5
  • 29
    • 33750275584 scopus 로고    scopus 로고
    • Molecular analysis of capsid protein of homalodisca coagulata virus-1, a new leafhopper-infecting virus from the glassy-winged sharpshooter, homalodisca coagulata
    • Hunter WB, Katsar CS, Chaparro JX (2006) Molecular analysis of capsid protein of Homalodisca coagulata Virus-1, a new leafhopper-infecting virus from the glassy-winged sharpshooter, Homalodisca coagulata. J Insect Sci 6: 1-10
    • (2006) J Insect Sci , vol.6 , pp. 1-10
    • Hunter, W.B.1    Katsar, C.S.2    Chaparro, J.X.3
  • 30
    • 80052275129 scopus 로고    scopus 로고
    • Complete genome analysis of three novel picornaviruses from diverse bat species
    • Lau SK, Woo PC, Lai KK, Huang Y, Yip CC,et al.. (2011) Complete genome analysis of three novel picornaviruses from diverse bat species. J Virol 85: 8819-8828
    • (2011) J Virol , vol.85 , pp. 8819-8828
    • Lau, S.K.1    Woo, P.C.2    Lai, K.K.3    Huang, Y.4    Yip, C.C.5
  • 31
    • 31644449968 scopus 로고    scopus 로고
    • Virus Taxonomy: Eighth Report of the International Committee on Taxonomy of Viruses
    • Stanway G, Brown F, Christian P (2005) Family Picornaviridae. Virus Taxonomy: Eighth Report of the International Committee on Taxonomy of Viruses: 757-778
    • (2005) Family Picornaviridae , pp. 757-778
    • Stanway, G.1    Brown, F.2    Christian, P.3
  • 32
    • 33751441296 scopus 로고    scopus 로고
    • In vitro and in vivo identification of structural and sequence elements in the 5′ untranslated region of Ectropis obliqua picorna-like virus required for internal initiation
    • DOI 10.1099/vir.0.82090-0
    • Lu J, Zhang J, Wang X, Jiang H, Liu C,et al.. (2006) In vitro and in vivo identification of structural and sequence elements in the 59 untranslated region of Ectropis obliqua picorna-like virus required for internal initiation. J Gen Virol 87: 3667-3677 (Pubitemid 44817001)
    • (2006) Journal of General Virology , vol.87 , Issue.12 , pp. 3667-3677
    • Lu, J.1    Zhang, J.2    Wang, X.3    Jiang, H.4    Liu, C.5    Hu, Y.6
  • 33
    • 34249911505 scopus 로고    scopus 로고
    • Phylogenetic analysis of deformed wing virus genotypes from diverse geographic origins indicates recent global distribution of the virus
    • Berenyi O, Bakonyi T, Derakhshifar I, Koglberger H, Topolska G,et al.. (2007) Phylogenetic analysis of deformed wing virus genotypes from diverse geographic origins indicates recent global distribution of the virus. Appl Environ Microbiol 73: 3605
    • (2007) Appl Environ Microbiol , vol.73 , pp. 3605
    • Berenyi, O.1    Bakonyi, T.2    Derakhshifar, I.3    Koglberger, H.4    Topolska, G.5
  • 34
    • 33751211878 scopus 로고    scopus 로고
    • Prevalence and phylogeny of Kakugo virus, a novel insect picorna-like virus that infects the honeybee (Apis mellifera L), under various colony conditions
    • Fujiyuki T, Ohka S, Takeuchi H, Ono M, Nomoto A, Kubo T (2006) Prevalence and phylogeny of Kakugo virus, a novel insect picorna-like virus that infects the honeybee (Apis mellifera L.), under various colony conditions. J Virol 80: 115-128 35
    • (2006) J Virol , vol.80 , pp. 115-128
    • Fujiyuki, T.1    Ohka, S.2    Takeuchi, H.3    Ono, M.4    Nomoto, A.5    Kubo, T.6
  • 35
    • 84859730833 scopus 로고    scopus 로고
    • Genetic and phylogenetic analysis of South Korean sacbrood virus isolates from infected honey bees (Apis cerana)
    • Choe SE, Nguyen TT, Hyun BH, Noh JH, Lee HS,et al.. (2012) Genetic and phylogenetic analysis of South Korean sacbrood virus isolates from infected honey bees (Apis cerana). Vet Microbiol 157: 32-40
    • (2012) Vet Microbiol , vol.157 , pp. 32-40
    • Choe, S.E.1    Nguyen, T.T.2    Hyun, B.H.3    Noh, J.H.4    Lee, H.S.5
  • 36
    • 0033018296 scopus 로고    scopus 로고
    • The nucleotide sequence of sacbrood virus of the honey bee: An insect picorna-like virus
    • Ghosh RC, Ball BV, Willcocks MM, Carter MJ (1999) The nucleotide sequence of sacbrood virus of the honey bee: an insect picorna-like virus. J Gen Virol 80 (Pt 6): 1541-1549 (Pubitemid 29261487)
    • (1999) Journal of General Virology , vol.80 , Issue.6 , pp. 1541-1549
    • Ghosh, R.C.1    Ball, B.V.2    Willcocks, M.M.3    Carter, M.J.4
  • 37
    • 84855199795 scopus 로고    scopus 로고
    • Genome sequence of SeIV-1, a novel virus from the Iflaviridae family infective to Spodoptera exigua
    • Millan-Leiva A, Jakubowska AK, Ferre J, Herrero S (2012) Genome sequence of SeIV-1, a novel virus from the Iflaviridae family infective to Spodoptera exigua. J Invertebr Pathol 109: 127-133
    • (2012) J Invertebr Pathol , vol.109 , pp. 127-133
    • Millan-Leiva, A.1    Jakubowska, A.K.2    Ferre, J.3    Herrero, S.4
  • 38
    • 59749083132 scopus 로고    scopus 로고
    • An atypical IRES within the 59 UTR of a dicistrovirus genome
    • Roberts LO, Groppelli E (2009) An atypical IRES within the 59 UTR of a dicistrovirus genome. Virus Res 139: 157-165
    • (2009) Virus Res , vol.139 , pp. 157-165
    • Roberts, L.O.1    Groppelli, E.2
  • 40
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M,et al.. (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28: 2731-2739
    • (2011) Molecular Biology and Evolution , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5


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