메뉴 건너뛰기




Volumn 1844, Issue 5, 2014, Pages 861-865

Inconvenient truth: Cancer biomarker development by using proteomics

Author keywords

Biomarker; Cancer; Proteomics

Indexed keywords

BIOLOGICAL MARKER; PROTEOME;

EID: 84898599851     PISSN: 15709639     EISSN: 18781454     Source Type: Journal    
DOI: 10.1016/j.bbapap.2013.07.009     Document Type: Review
Times cited : (35)

References (55)
  • 1
    • 28544446695 scopus 로고    scopus 로고
    • Biomarkers in cancer staging, prognosis and treatment selection
    • DOI 10.1038/nrc1739
    • J.A. Ludwig, and J.N. Weinstein Biomarkers in cancer staging, prognosis and treatment selection Nat. Rev. Cancer 5 2005 845 856 (Pubitemid 41746029)
    • (2005) Nature Reviews Cancer , vol.5 , Issue.11 , pp. 845-856
    • Ludwig, J.A.1    Weinstein, J.N.2
  • 3
    • 0014770729 scopus 로고
    • Osteogenic sarcoma under the age of twenty-one. A review of one hundred and forty-five operative cases
    • R.C. Marcove, V. Mike, J.V. Hajek, A.G. Levin, and R.V. Hutter Osteogenic sarcoma under the age of twenty-one. A review of one hundred and forty-five operative cases J. Bone Joint Surg. Am. 52 1970 411 423
    • (1970) J. Bone Joint Surg. Am. , vol.52 , pp. 411-423
    • Marcove, R.C.1    Mike, V.2    Hajek, J.V.3    Levin, A.G.4    Hutter, R.V.5
  • 5
    • 56249101688 scopus 로고    scopus 로고
    • Prognostic evaluation based on a new TNM staging system proposed by the International Association for the Study of Lung Cancer for resected non-small cell lung cancers
    • T. Fukui, S. Mori, S. Hatooka, M. Shinoda, and T. Mitsudomi Prognostic evaluation based on a new TNM staging system proposed by the International Association for the Study of Lung Cancer for resected non-small cell lung cancers J. Thorac. Cardiovasc. Surg. 136 2008 1343 1348
    • (2008) J. Thorac. Cardiovasc. Surg. , vol.136 , pp. 1343-1348
    • Fukui, T.1    Mori, S.2    Hatooka, S.3    Shinoda, M.4    Mitsudomi, T.5
  • 6
    • 58249084758 scopus 로고    scopus 로고
    • Point: Clinical stage IA non-small cell lung cancer determined by computed tomography and positron emission tomography is frequently not pathologic IA non-small cell lung cancer: The problem of understaging
    • B.M. Stiles, E.L. Servais, P.C. Lee, J.L. Port, S. Paul, and N.K. Altorki Point: Clinical stage IA non-small cell lung cancer determined by computed tomography and positron emission tomography is frequently not pathologic IA non-small cell lung cancer: the problem of understaging J. Thorac. Cardiovasc. Surg. 137 2009 13 19
    • (2009) J. Thorac. Cardiovasc. Surg. , vol.137 , pp. 13-19
    • Stiles, B.M.1    Servais, E.L.2    Lee, P.C.3    Port, J.L.4    Paul, S.5    Altorki, N.K.6
  • 10
    • 34249018869 scopus 로고    scopus 로고
    • Gastrointestinal stromal tumour
    • DOI 10.1016/S0140-6736(07)60780-6, PII S0140673607607806
    • B.P. Rubin, M.C. Heinrich, and C.L. Corless Gastrointestinal stromal tumour Lancet 369 2007 1731 1741 (Pubitemid 46778870)
    • (2007) Lancet , vol.369 , Issue.9574 , pp. 1731-1741
    • Rubin, B.P.1    Heinrich, M.C.2    Corless, C.L.3
  • 15
    • 77955976922 scopus 로고    scopus 로고
    • The grand challenge to decipher the cancer proteome
    • S. Hanash, and A. Taguchi The grand challenge to decipher the cancer proteome Nat. Rev. Cancer 10 2010 652 660
    • (2010) Nat. Rev. Cancer , vol.10 , pp. 652-660
    • Hanash, S.1    Taguchi, A.2
  • 16
    • 41649100689 scopus 로고    scopus 로고
    • Mining the plasma proteome for cancer biomarkers
    • DOI 10.1038/nature06916, PII NATURE06916
    • S.M. Hanash, S.J. Pitteri, and V.M. Faca Mining the plasma proteome for cancer biomarkers Nature 452 2008 571 579 (Pubitemid 351483371)
    • (2008) Nature , vol.452 , Issue.7187 , pp. 571-579
    • Hanash, S.M.1    Pitteri, S.J.2    Faca, V.M.3
  • 18
    • 23944524368 scopus 로고    scopus 로고
    • Depletion of multiple high-abundance proteins improves protein profiling capacities of human serum and plasma
    • DOI 10.1002/pmic.200401228
    • L.A. Echan, H.Y. Tang, N. Ali-Khan, K. Lee, and D.W. Speicher Depletion of multiple high-abundance proteins improves protein profiling capacities of human serum and plasma Proteomics 5 2005 3292 3303 (Pubitemid 41192036)
    • (2005) Proteomics , vol.5 , Issue.13 , pp. 3292-3303
    • Echan, L.A.1    Tang, H.-Y.2    Ali-Khan, N.3    Lee, K.4    Speicher, D.W.5
  • 19
    • 33645721632 scopus 로고    scopus 로고
    • Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins
    • L. Anderson, and C.L. Hunter Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins Mol. Cell. Proteomics 5 2006 573 588
    • (2006) Mol. Cell. Proteomics , vol.5 , pp. 573-588
    • Anderson, L.1    Hunter, C.L.2
  • 22
    • 0035151047 scopus 로고    scopus 로고
    • Advances in protein microarray technology for protein expression and interaction profiling
    • B.B. Haab Advances in protein microarray technology for protein expression and interaction profiling Curr. Opin. Drug Discov. Devel. 4 2001 116 123 (Pubitemid 32118467)
    • (2001) Current Opinion in Drug Discovery and Development , vol.4 , Issue.1 , pp. 116-123
    • Haab, B.B.1
  • 23
    • 33746648133 scopus 로고    scopus 로고
    • Emerging use of nanoparticles in diagnosis and treatment of breast cancer
    • DOI 10.1016/S1470-2045(06)70793-8, PII S1470204506707938
    • M.V. Yezhelyev, X. Gao, Y. Xing, A. Al-Hajj, S. Nie, and R.M. O'Regan Emerging use of nanoparticles in diagnosis and treatment of breast cancer Lancet Oncol. 7 2006 657 667 (Pubitemid 44143778)
    • (2006) Lancet Oncology , vol.7 , Issue.8 , pp. 657-667
    • Yezhelyev, M.V.1    Gao, X.2    Xing, Y.3    Al-Hajj, A.4    Nie, S.5    O'Regan, R.M.6
  • 24
    • 25144497084 scopus 로고    scopus 로고
    • $104 Million proteomics initiative gets green light
    • DOI 10.1093/jnci/dji325
    • K. Hede $104 million proteomics initiative gets green light J. Natl. Cancer Inst. 97 2005 1324 1325 (Pubitemid 41487795)
    • (2005) Journal of the National Cancer Institute , vol.97 , Issue.18 , pp. 1324-1325
    • Hede, K.1
  • 25
    • 2942535913 scopus 로고    scopus 로고
    • Running before we can walk?
    • DOI 10.1038/429496a
    • E. Check Proteomics and cancer: running before we can walk? Nature 429 2004 496 497 (Pubitemid 38737636)
    • (2004) Nature , vol.429 , Issue.6991 , pp. 496-497
    • Check, E.1
  • 26
    • 80054943335 scopus 로고    scopus 로고
    • Why have protein biomarkers not reached the clinic?
    • S.M. Hanash Why have protein biomarkers not reached the clinic? Genome Med. 3 2011 66
    • (2011) Genome Med. , vol.3 , pp. 66
    • Hanash, S.M.1
  • 27
    • 78651394465 scopus 로고    scopus 로고
    • Bring on the biomarkers
    • G. Poste Bring on the biomarkers Nature 469 2011 156 157
    • (2011) Nature , vol.469 , pp. 156-157
    • Poste, G.1
  • 31
    • 0001644020 scopus 로고    scopus 로고
    • The human plasma proteome: History, character, and diagnostic prospects
    • N.L. Anderson, and N.G. Anderson The human plasma proteome: history, character, and diagnostic prospects Mol. Cell. Proteomics 1 2002 845 867
    • (2002) Mol. Cell. Proteomics , vol.1 , pp. 845-867
    • Anderson, N.L.1    Anderson, N.G.2
  • 32
    • 81455150067 scopus 로고    scopus 로고
    • Mathematical model identifies blood biomarker-based early cancer detection strategies and limitations
    • S.S. Hori, and S.S. Gambhir Mathematical model identifies blood biomarker-based early cancer detection strategies and limitations Sci. Transl. Med. 3 2011 109 116
    • (2011) Sci. Transl. Med. , vol.3 , pp. 109-116
    • Hori, S.S.1    Gambhir, S.S.2
  • 33
    • 79951518985 scopus 로고    scopus 로고
    • Mining the plasma proteome for disease applications across seven logs of protein abundance
    • Q. Zhang, V. Faca, and S. Hanash Mining the plasma proteome for disease applications across seven logs of protein abundance J. Proteome Res. 10 2011 46 50
    • (2011) J. Proteome Res. , vol.10 , pp. 46-50
    • Zhang, Q.1    Faca, V.2    Hanash, S.3
  • 34
    • 1942438016 scopus 로고    scopus 로고
    • Rules of evidence for cancer molecular-marker discovery and validation
    • D.F. Ransohoff Rules of evidence for cancer molecular-marker discovery and validation Nat. Rev. Cancer 4 2004 309 314 (Pubitemid 38525286)
    • (2004) Nature Reviews Cancer , vol.4 , Issue.4 , pp. 309-314
    • Ransohoff, D.F.1
  • 35
    • 13444283596 scopus 로고    scopus 로고
    • Bias as a threat to the validity of cancer molecular-marker research
    • DOI 10.1038/nrc1550
    • D.F. Ransohoff Bias as a threat to the validity of cancer molecular-marker research Nat. Rev. Cancer 5 2005 142 149 (Pubitemid 40215862)
    • (2005) Nature Reviews Cancer , vol.5 , Issue.2 , pp. 142-149
    • Ransohoff, D.F.1
  • 36
    • 75749101060 scopus 로고    scopus 로고
    • A recipe for proteomics diagnostic test development: The OVA1 test, from biomarker discovery to FDA clearance
    • E.T. Fung A recipe for proteomics diagnostic test development: the OVA1 test, from biomarker discovery to FDA clearance Clin. Chem. 56 2010 327 329
    • (2010) Clin. Chem. , vol.56 , pp. 327-329
    • Fung, E.T.1
  • 37
    • 1242328742 scopus 로고    scopus 로고
    • SELDI-TOF-based serum proteomic pattern diagnostics for early detection of cancer
    • DOI 10.1016/j.copbio.2004.01.005
    • E.F. Petricoin, and L.A. Liotta SELDI-TOF-based serum proteomic pattern diagnostics for early detection of cancer Curr. Opin. Biotechnol. 15 2004 24 30 (Pubitemid 38224245)
    • (2004) Current Opinion in Biotechnology , vol.15 , Issue.1 , pp. 24-30
    • Petricoin, E.F.1    Liotta, L.A.2
  • 38
    • 0035106351 scopus 로고    scopus 로고
    • Large-scale analysis of the yeast proteome by multidimensional protein identification technology
    • DOI 10.1038/85686
    • M.P. Washburn, D. Wolters, and J.R. Yates III Large-scale analysis of the yeast proteome by multidimensional protein identification technology Nat. Biotechnol. 19 2001 242 247 (Pubitemid 32220565)
    • (2001) Nature Biotechnology , vol.19 , Issue.3 , pp. 242-247
    • Washburn, M.P.1    Wolters, D.2    Yates, J.R.3
  • 39
    • 78649453054 scopus 로고    scopus 로고
    • Implications of cancer-associated systemic inflammation for biomarker studies
    • M. Kowalewska, R. Nowak, and M. Chechlinska Implications of cancer-associated systemic inflammation for biomarker studies Biochim. Biophys. Acta 1806 2010 163 171
    • (2010) Biochim. Biophys. Acta , vol.1806 , pp. 163-171
    • Kowalewska, M.1    Nowak, R.2    Chechlinska, M.3
  • 40
    • 72949083963 scopus 로고    scopus 로고
    • Systemic inflammation as a confounding factor in cancer biomarker discovery and validation
    • M. Chechlinska, M. Kowalewska, and R. Nowak Systemic inflammation as a confounding factor in cancer biomarker discovery and validation Nat. Rev. Cancer 10 2010 2 3
    • (2010) Nat. Rev. Cancer , vol.10 , pp. 2-3
    • Chechlinska, M.1    Kowalewska, M.2    Nowak, R.3
  • 41
    • 33646160623 scopus 로고    scopus 로고
    • Inflammation, a key event in cancer development
    • H. Lu, W. Ouyang, and C. Huang Inflammation, a key event in cancer development Mol. Cancer Res. 4 2006 221 233
    • (2006) Mol. Cancer Res. , vol.4 , pp. 221-233
    • Lu, H.1    Ouyang, W.2    Huang, C.3
  • 46
    • 0141520541 scopus 로고    scopus 로고
    • Application of sensitive fluorescent dyes in linkage of laser microdissection and two-dimensional gel electrophoresis as a cancer proteomic study tool
    • DOI 10.1002/pmic.200300531
    • T. Kondo, M. Seike, Y. Mori, K. Fujii, T. Yamada, and S. Hirohashi Application of sensitive fluorescent dyes in linkage of laser microdissection and two-dimensional gel electrophoresis as a cancer proteomic study tool Proteomics 3 2003 1758 1766 (Pubitemid 37129823)
    • (2003) Proteomics , vol.3 , Issue.9 , pp. 1758-1766
    • Kondo, T.1    Seike, M.2    Mori, Y.3    Fujii, K.4    Yamada, T.5    Hirohashi, S.6
  • 48
    • 33845587418 scopus 로고    scopus 로고
    • Protein clusters associated with carcinogenesis, histological differentiation and nodal metastasis in esophageal cancer
    • DOI 10.1002/pmic.200600488
    • H. Hatakeyama, T. Kondo, K. Fujii, Y. Nakanishi, H. Kato, S. Fukuda, and S. Hirohashi Protein clusters associated with carcinogenesis, histological differentiation and nodal metastasis in esophageal cancer Proteomics 6 2006 6300 6316 (Pubitemid 44935516)
    • (2006) Proteomics , vol.6 , Issue.23 , pp. 6300-6316
    • Hatakeyama, H.1    Kondo, T.2    Fujii, K.3    Nakanishi, Y.4    Kato, H.5    Fukuda, S.6    Hirohashi, S.7
  • 50
    • 84871778930 scopus 로고    scopus 로고
    • Laser microdissection and two-dimensional difference gel electrophoresis reveal proteomic intra-tumor heterogeneity in colorectal cancer
    • Y. Sugihara, H. Taniguchi, R. Kushima, H. Tsuda, D. Kubota, H. Ichikawa, S. Fujita, and T. Kondo Laser microdissection and two-dimensional difference gel electrophoresis reveal proteomic intra-tumor heterogeneity in colorectal cancer J. Proteomics 78 2013 134 147
    • (2013) J. Proteomics , vol.78 , pp. 134-147
    • Sugihara, Y.1    Taniguchi, H.2    Kushima, R.3    Tsuda, H.4    Kubota, D.5    Ichikawa, H.6    Fujita, S.7    Kondo, T.8
  • 51
    • 34147161968 scopus 로고    scopus 로고
    • Application of highly sensitive fluorescent dyes (CyDye DIGE Fluor saturation dyes) to laser microdissection and two-dimensional difference gel electrophoresis (2D-DIGE) for cancer proteomics
    • T. Kondo, and S. Hirohashi Application of highly sensitive fluorescent dyes (CyDye DIGE Fluor saturation dyes) to laser microdissection and two-dimensional difference gel electrophoresis (2D-DIGE) for cancer proteomics Nat. Protoc. 1 2007 2940 2956
    • (2007) Nat. Protoc. , vol.1 , pp. 2940-2956
    • Kondo, T.1    Hirohashi, S.2
  • 52
    • 84870393344 scopus 로고    scopus 로고
    • A quantitative proteomic workflow for characterization of frozen clinical biopsies: Laser capture microdissection coupled with label-free mass spectrometry
    • J.P. Shapiro, S. Biswas, A.S. Merchant, A. Satoskar, C. Taslim, S. Lin, B.H. Rovin, C.K. Sen, S. Roy, and M.A. Freitas A quantitative proteomic workflow for characterization of frozen clinical biopsies: laser capture microdissection coupled with label-free mass spectrometry J. Proteomics 77 2012 433 440
    • (2012) J. Proteomics , vol.77 , pp. 433-440
    • Shapiro, J.P.1    Biswas, S.2    Merchant, A.S.3    Satoskar, A.4    Taslim, C.5    Lin, S.6    Rovin, B.H.7    Sen, C.K.8    Roy, S.9    Freitas, M.A.10
  • 54
    • 66749148302 scopus 로고    scopus 로고
    • Approaching solid tumor heterogeneity on a cellular basis by tissue proteomics using laser capture microdissection and biological mass spectrometry
    • D.J. Johann, J. Rodriguez-Canales, S. Mukherjee, D.A. Prieto, J.C. Hanson, M. Emmert-Buck, and J. Blonder Approaching solid tumor heterogeneity on a cellular basis by tissue proteomics using laser capture microdissection and biological mass spectrometry J. Proteome Res. 8 2009 2310 2318
    • (2009) J. Proteome Res. , vol.8 , pp. 2310-2318
    • Johann, D.J.1    Rodriguez-Canales, J.2    Mukherjee, S.3    Prieto, D.A.4    Hanson, J.C.5    Emmert-Buck, M.6    Blonder, J.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.