-
1
-
-
33644782643
-
The new higher level classification of eukaryotes with emphasis on the taxonomy of protists
-
Adl SM, Simpson AG, Farmer MA, Andersen RA, Anderson OR, Barta JR, Bowser SS, Brugerolle G, Fensome RA, Fredericq S, James TY, Karpov S, Kugrens P, Krug J, Lane CE, Lewis LA, Lodge J, Lynn DH, Mann DG, McCourt RM, Mendoza L, Moestrup O, Mozley-Standridge SE, Nerad TA, Shearer CA, Smirnov AV, Spiegel FW, Taylor MF (2005) The new higher level classification of eukaryotes with emphasis on the taxonomy of protists. J Eukaryot Microbiol 52: 399-451.
-
(2005)
J Eukaryot Microbiol
, vol.52
, pp. 399-451
-
-
Adl, S.M.1
Simpson, A.G.2
Farmer, M.A.3
Andersen, R.A.4
Anderson, O.R.5
Barta, J.R.6
Bowser, S.S.7
Brugerolle, G.8
Fensome, R.A.9
Fredericq, S.10
James, T.Y.11
Karpov, S.12
Kugrens, P.13
Krug, J.14
Lane, C.E.15
Lewis, L.A.16
Lodge, J.17
Lynn, D.H.18
Mann, D.G.19
McCourt, R.M.20
Mendoza, L.21
Moestrup, O.22
Mozley-Standridge, S.E.23
Nerad, T.A.24
Shearer, C.A.25
Smirnov, A.V.26
Spiegel, F.W.27
Taylor, M.F.28
more..
-
2
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215: 403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
68149178616
-
A method for studying protistan diversity using massively parallel sequencing of V9 hypervariable regions of small-subunit ribosomal RNA genes
-
Amaral-Zettler LA, McCliment EA, Ducklow HW, Huse SM (2009) A method for studying protistan diversity using massively parallel sequencing of V9 hypervariable regions of small-subunit ribosomal RNA genes. PLoS ONE 4: e6372.
-
(2009)
PLoS ONE
, vol.4
-
-
Amaral-Zettler, L.A.1
McCliment, E.A.2
Ducklow, H.W.3
Huse, S.M.4
-
4
-
-
84876500035
-
Impact of protist grazing on a key bacterial group for biogeochemical cycling in Baltic Sea pelagic oxic/anoxic interfaces
-
Anderson R, Wylezich C, Glaubitz S, Labrenz M, Jürgens K (2013) Impact of protist grazing on a key bacterial group for biogeochemical cycling in Baltic Sea pelagic oxic/anoxic interfaces. Environ Microbiol 15: 1580-1594.
-
(2013)
Environ Microbiol
, vol.15
, pp. 1580-1594
-
-
Anderson, R.1
Wylezich, C.2
Glaubitz, S.3
Labrenz, M.4
Jürgens, K.5
-
5
-
-
79952452022
-
Dinoflagellates associated with freshwater sponges from the ancient lake baikal
-
Annenkova NV, Lavrov DV, Belikov SI (2011) Dinoflagellates associated with freshwater sponges from the ancient lake baikal. Protist 162: 222-236.
-
(2011)
Protist
, vol.162
, pp. 222-236
-
-
Annenkova, N.V.1
Lavrov, D.V.2
Belikov, S.I.3
-
6
-
-
67349286042
-
Phylogenetic diversity and antimicrobial activities of fungi associated with Haliclona simulans isolated from Irish coastal waters
-
Baker PW, Kennedy J, Dobson AD, Marchesi JR (2009) Phylogenetic diversity and antimicrobial activities of fungi associated with Haliclona simulans isolated from Irish coastal waters. Mar Biotechnol 11: 540-547.
-
(2009)
Mar Biotechnol
, vol.11
, pp. 540-547
-
-
Baker, P.W.1
Kennedy, J.2
Dobson, A.D.3
Marchesi, J.R.4
-
7
-
-
20444446106
-
Polyubiquitin insertions and the phylogeny of Cercozoa and Rhizaria
-
Bass D, Moreira D, Lopez-Garcia P, Polet S, Chao EE, von der Heyden S, Pawlowski J, Cavalier-Smith T (2005) Polyubiquitin insertions and the phylogeny of Cercozoa and Rhizaria. Protist 156: 149-161.
-
(2005)
Protist
, vol.156
, pp. 149-161
-
-
Bass, D.1
Moreira, D.2
Lopez-Garcia, P.3
Polet, S.4
Chao, E.E.5
von der Heyden, S.6
Pawlowski, J.7
Cavalier-Smith, T.8
-
8
-
-
80755124854
-
Savoryellales (Hypocreomycetidae, Sordariomycetes): a novel lineage of aquatic ascomycetes inferred from multiple-gene phylogenies of the genera Ascotaiwania, Ascothailandia, and Savoryella
-
Boonyuen N, Chuaseeharonnachai C, Suetrong S, Sri-Indrasutdhi V, Sivichai S, Jones EB, Pang KL (2011) Savoryellales (Hypocreomycetidae, Sordariomycetes): a novel lineage of aquatic ascomycetes inferred from multiple-gene phylogenies of the genera Ascotaiwania, Ascothailandia, and Savoryella. Mycologia 103: 1351-1371.
-
(2011)
Mycologia
, vol.103
, pp. 1351-1371
-
-
Boonyuen, N.1
Chuaseeharonnachai, C.2
Suetrong, S.3
Sri-Indrasutdhi, V.4
Sivichai, S.5
Jones, E.B.6
Pang, K.L.7
-
9
-
-
1342311386
-
Marine-derived fungi: a chemically and biologically diverse group of microorganisms
-
Bugni TS, Ireland CM (2004) Marine-derived fungi: a chemically and biologically diverse group of microorganisms. Nat Prod Rep 21: 143-163.
-
(2004)
Nat Prod Rep
, vol.21
, pp. 143-163
-
-
Bugni, T.S.1
Ireland, C.M.2
-
10
-
-
77956094384
-
Freshwater Perkinsea and marine-freshwater colonizations revealed by pyrosequencing and phylogeny of environmental rDNA
-
Brate J, Logares R, Berney C, Ree DK, Klaveness D, Jakobsen KS, Shalchian-Tabrizi (2010) Freshwater Perkinsea and marine-freshwater colonizations revealed by pyrosequencing and phylogeny of environmental rDNA. ISME J 4: 1144-1153.
-
(2010)
ISME J
, vol.4
, pp. 1144-1153
-
-
Brate, J.1
Logares, R.2
Berney, C.3
Ree, D.K.4
Klaveness, D.5
Jakobsen, K.S.6
Shalchian-Tabrizi7
-
11
-
-
85046916614
-
Eukaryotic algae: where lies the diversity of oxygenic photosynthesis
-
Cardol P, Franck F (2010) Eukaryotic algae: where lies the diversity of oxygenic photosynthesis. Photosynth Res 106: 1-2.
-
(2010)
Photosynth Res
, vol.106
, pp. 1-2
-
-
Cardol, P.1
Franck, F.2
-
12
-
-
83655192943
-
Marine protistan diversity
-
Caron DA, Countway PD, Jones AC, Kim DY, Schnetzer A (2012) Marine protistan diversity. Ann Rev Mar Sci 4: 467-493.
-
(2012)
Ann Rev Mar Sci
, vol.4
, pp. 467-493
-
-
Caron, D.A.1
Countway, P.D.2
Jones, A.C.3
Kim, D.Y.4
Schnetzer, A.5
-
13
-
-
55949117660
-
Molecular phylogeny of choanoflagellates, the sister group to Metazoa
-
Carr M, Leadbeater BS, Hassan R, Nelson M, Baldauf SL (2008) Molecular phylogeny of choanoflagellates, the sister group to Metazoa. Proc Natl Acad Sci U S A 105: 16641-16646.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 16641-16646
-
-
Carr, M.1
Leadbeater, B.S.2
Hassan, R.3
Nelson, M.4
Baldauf, S.L.5
-
14
-
-
34247859231
-
Distinct protistan assemblages characterize the euphotic zone and deep sea (2500 m) of the western North Atlantic (Sargasso Sea and Gulf Stream)
-
Countway PD, Gast RJ, Dennett MR, Savai P, Rose JM, Caron DA (2007) Distinct protistan assemblages characterize the euphotic zone and deep sea (2500 m) of the western North Atlantic (Sargasso Sea and Gulf Stream). Environ Microbiol 9: 1219-1232.
-
(2007)
Environ Microbiol
, vol.9
, pp. 1219-1232
-
-
Countway, P.D.1
Gast, R.J.2
Dennett, M.R.3
Savai, P.4
Rose, J.M.5
Caron, D.A.6
-
15
-
-
0036861594
-
Ammonium excretion by a symbiotic sponge supplies the nitrogen requirements of its rhodophyte partner
-
Davy SK, Trautman DA, Borowitzka MA, Hinde R (2002) Ammonium excretion by a symbiotic sponge supplies the nitrogen requirements of its rhodophyte partner. J Exp Biol 205: 3505-3511.
-
(2002)
J Exp Biol
, vol.205
, pp. 3505-3511
-
-
Davy, S.K.1
Trautman, D.A.2
Borowitzka, M.A.3
Hinde, R.4
-
16
-
-
79960472526
-
Recovery and phylogenetic diversity of culturable fungi associated with marine sponges Clathrina luteoculcitella and Holoxea sp. in the South China Sea
-
Ding B, Yin Y, Zhang F, Li Z (2011) Recovery and phylogenetic diversity of culturable fungi associated with marine sponges Clathrina luteoculcitella and Holoxea sp. in the South China Sea. Mar Biotechnol 13: 713-721.
-
(2011)
Mar Biotechnol
, vol.13
, pp. 713-721
-
-
Ding, B.1
Yin, Y.2
Zhang, F.3
Li, Z.4
-
17
-
-
76649121526
-
Recovery of melanized yeasts from Eastern Mediterranean beach sand associated with the prevailing geochemical and marine flora patterns
-
Efstratiou MA, Velegraki A (2010) Recovery of melanized yeasts from Eastern Mediterranean beach sand associated with the prevailing geochemical and marine flora patterns. Med Mycol 48: 413-415.
-
(2010)
Med Mycol
, vol.48
, pp. 413-415
-
-
Efstratiou, M.A.1
Velegraki, A.2
-
18
-
-
38649124950
-
Missing protists: a molecular prospective
-
Epstein S, López-García P (2008) "Missing" protists: a molecular prospective. Biodivers Conserv 17: 261-276.
-
(2008)
Biodivers Conserv
, vol.17
, pp. 261-276
-
-
Epstein, S.1
López-García, P.2
-
19
-
-
54449086625
-
Molecular detection of fungal communities in the Hawaiian marine sponges Suberites zeteki and Mycale armata
-
Gao Z, Li B, Zheng C, Wang G (2008) Molecular detection of fungal communities in the Hawaiian marine sponges Suberites zeteki and Mycale armata. Appl Environ Microbiol 74: 6091-6101.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 6091-6101
-
-
Gao, Z.1
Li, B.2
Zheng, C.3
Wang, G.4
-
20
-
-
0031854930
-
A sponge/dinoflagellate association in the haplosclerid sponge Haliclona sp.: cellular origin of cytotoxic alkaloids by percoll density gradient fraction
-
Garson MJ, Flowers AE, Webb RI, Charan RD, McCaffrey EJ (1998) A sponge/dinoflagellate association in the haplosclerid sponge Haliclona sp.: cellular origin of cytotoxic alkaloids by percoll density gradient fraction. Cell Tissue Res 293: 365-373.
-
(1998)
Cell Tissue Res
, vol.293
, pp. 365-373
-
-
Garson, M.J.1
Flowers, A.E.2
Webb, R.I.3
Charan, R.D.4
McCaffrey, E.J.5
-
21
-
-
0028709349
-
Diversity of actinomycetes and fungi on seaweeds from the Iberian coasts
-
Genilloud O, Pelaez F, Gonzalez I, Diez MT (1994) Diversity of actinomycetes and fungi on seaweeds from the Iberian coasts. Microbiologia 10: 413-422.
-
(1994)
Microbiologia
, vol.10
, pp. 413-422
-
-
Genilloud, O.1
Pelaez, F.2
Gonzalez, I.3
Diez, M.T.4
-
22
-
-
55849101172
-
Widespread occurrence and genetic diversity of marine parasitoids belonging to Syndiniales (Alveolata)
-
Guillou L, Viprey M, Chambouvet A, Welsh RM, Kirkham AR, Massana R, Scanlan DJ, Worden AZ (2008) Widespread occurrence and genetic diversity of marine parasitoids belonging to Syndiniales (Alveolata). Environ Microbiol 10: 3349-3365.
-
(2008)
Environ Microbiol
, vol.10
, pp. 3349-3365
-
-
Guillou, L.1
Viprey, M.2
Chambouvet, A.3
Welsh, R.M.4
Kirkham, A.R.5
Massana, R.6
Scanlan, D.J.7
Worden, A.Z.8
-
24
-
-
0029660411
-
Symbiotic zooxanthellae enhance boring and growth rates of the tropical sponge Anthosigmella varians forma varians
-
Hill MS (1996) Symbiotic zooxanthellae enhance boring and growth rates of the tropical sponge Anthosigmella varians forma varians. Mar Biol 125: 649-654.
-
(1996)
Mar Biol
, vol.125
, pp. 649-654
-
-
Hill, M.S.1
-
25
-
-
0034489463
-
Fungi from marine sponges: diversity, biological activity and secondary metabolites
-
Höller U, Wright AD, Mathée GF, König GM, Draeger S, Austd H-J, Schulzd B (2000) Fungi from marine sponges: diversity, biological activity and secondary metabolites. Mycol Res 104: 1354-1365.
-
(2000)
Mycol Res
, vol.104
, pp. 1354-1365
-
-
Höller, U.1
Wright, A.D.2
Mathée, G.F.3
König, G.M.4
Draeger, S.5
Austd, H.-J.6
Schulzd, B.7
-
26
-
-
68149181752
-
Classification of marine Ascomycota, anamorphic taxa and Basidiomycota
-
Jones EBG, Sakayaroj J, Suetrong S, Somrithipol S, Pang KL (2009) Classification of marine Ascomycota, anamorphic taxa and Basidiomycota. Fungal Divers 35: 1-187.
-
(2009)
Fungal Divers
, vol.35
, pp. 1-187
-
-
Jones, E.B.G.1
Sakayaroj, J.2
Suetrong, S.3
Somrithipol, S.4
Pang, K.L.5
-
27
-
-
33847780204
-
Protozoan-bacterial symbiosis in a deep-sea hydrothermal vent folliculinid ciliate (Folliculinopsis sp.) from the Juan de Fuca Ridge
-
Kouris A, Juniper SK, Frébourg G, Gaill F (2007) Protozoan-bacterial symbiosis in a deep-sea hydrothermal vent folliculinid ciliate (Folliculinopsis sp.) from the Juan de Fuca Ridge. Mar Ecol 28: 63-71.
-
(2007)
Mar Ecol
, vol.28
, pp. 63-71
-
-
Kouris, A.1
Juniper, S.K.2
Frébourg, G.3
Gaill, F.4
-
28
-
-
33747601643
-
Identification of a protist-coral association and its possible ecological role
-
Kramarsky-Winter E, Harel M, Siboni N, Ben Dov E, Brickner I, Loya Y, Kushmaro A (2006) Identification of a protist-coral association and its possible ecological role. Mar Ecol Prog Ser 317: 67-73.
-
(2006)
Mar Ecol Prog Ser
, vol.317
, pp. 67-73
-
-
Kramarsky-Winter, E.1
Harel, M.2
Siboni, N.3
Ben Dov, E.4
Brickner, I.5
Loya, Y.6
Kushmaro, A.7
-
29
-
-
79953028506
-
Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea
-
Lee OO, Wang Y, Yang J, Lafi FF, Al-Suwailem A, Qian P-Y (2011) Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea. ISME J 5: 650-664.
-
(2011)
ISME J
, vol.5
, pp. 650-664
-
-
Lee, O.O.1
Wang, Y.2
Yang, J.3
Lafi, F.F.4
Al-Suwailem, A.5
Qian, P.-Y.6
-
30
-
-
0345816862
-
Microbial symbiosis in marine sponges
-
Lee Y-K, Lee J-H, Lee H-K (2001) Microbial symbiosis in marine sponges. J Microbiol 39: 254-264.
-
(2001)
J Microbiol
, vol.39
, pp. 254-264
-
-
Lee, Y.-K.1
Lee, J.-H.2
Lee, H.-K.3
-
31
-
-
61349132085
-
Diversity and abundance of photosynthetic sponges in temperate Western Australia
-
Lemloh ML, Fromont J, Brummer F, Usher KM (2009) Diversity and abundance of photosynthetic sponges in temperate Western Australia. BMC Ecol 9: 4.
-
(2009)
BMC Ecol
, vol.9
, pp. 4
-
-
Lemloh, M.L.1
Fromont, J.2
Brummer, F.3
Usher, K.M.4
-
32
-
-
61849136723
-
Diversity of fungal isolates from three Hawaiian marine sponges
-
Li Q, Wang G (2009) Diversity of fungal isolates from three Hawaiian marine sponges. Microbiol Res 164: 233-241.
-
(2009)
Microbiol Res
, vol.164
, pp. 233-241
-
-
Li, Q.1
Wang, G.2
-
33
-
-
77956521904
-
Phylogenetic diversity of culturable fungi associated with two marine sponges: Haliclona simulans and Gelliodes carnosa, collected from the Hainan Island coastal waters of the South China Sea
-
Liu WC, Li CQ, Zhu P, Yang JL, Cheng KD (2010) Phylogenetic diversity of culturable fungi associated with two marine sponges: Haliclona simulans and Gelliodes carnosa, collected from the Hainan Island coastal waters of the South China Sea. Fungal Divers 42: 1-15.
-
(2010)
Fungal Divers
, vol.42
, pp. 1-15
-
-
Liu, W.C.1
Li, C.Q.2
Zhu, P.3
Yang, J.L.4
Cheng, K.D.5
-
34
-
-
33846064724
-
Eukaryotic diversity associated with carbonates and fluid-seawater interface in Lost City hydrothermal field
-
Lopez-Garcia P, Vereshchaka A, Moreira D (2007) Eukaryotic diversity associated with carbonates and fluid-seawater interface in Lost City hydrothermal field. Environ Microbiol 9: 546-554.
-
(2007)
Environ Microbiol
, vol.9
, pp. 546-554
-
-
Lopez-Garcia, P.1
Vereshchaka, A.2
Moreira, D.3
-
35
-
-
59649113268
-
Fossil steroids record the appearance of Demospongiae during the Cryogenian period
-
Love GD, Grosjean E, Stalvies C, Fike DA, Grotzinger JP, Bradley AS, Kelly AE, Bhatia M, Meredith W, Snape CE, Bowring SA, Condon DJ, Summons RE (2009) Fossil steroids record the appearance of Demospongiae during the Cryogenian period. Nature 457: 718-721.
-
(2009)
Nature
, vol.457
, pp. 718-721
-
-
Love, G.D.1
Grosjean, E.2
Stalvies, C.3
Fike, D.A.4
Grotzinger, J.P.5
Bradley, A.S.6
Kelly, A.E.7
Bhatia, M.8
Meredith, W.9
Snape, C.E.10
Bowring, S.A.11
Condon, D.J.12
Summons, R.E.13
-
36
-
-
33748713890
-
UniFrac-an online tool for comparing microbial community diversity in a phylogenetic context
-
Lozupone C, Hamady M, Knight R (2006) UniFrac-an online tool for comparing microbial community diversity in a phylogenetic context. BMC Bioinformatics 7: 371.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 371
-
-
Lozupone, C.1
Hamady, M.2
Knight, R.3
-
38
-
-
0024248747
-
Production and use of detritus in various freshwater, estuarine, and coastal marine ecosystems
-
Mann KH (1988) Production and use of detritus in various freshwater, estuarine, and coastal marine ecosystems. Limnol Oceanogr 33: 910-930.
-
(1988)
Limnol Oceanogr
, vol.33
, pp. 910-930
-
-
Mann, K.H.1
-
39
-
-
45849119808
-
Unveiling new microbial eukaryotes in the surface ocean
-
Massana R, Pedros-Alio C (2008) Unveiling new microbial eukaryotes in the surface ocean. Curr Opin Microbiol 11: 213-218.
-
(2008)
Curr Opin Microbiol
, vol.11
, pp. 213-218
-
-
Massana, R.1
Pedros-Alio, C.2
-
40
-
-
77956176168
-
Microbial diversity associated with algae, ascidians and sponges from the north coast of São Paulo state, Brazil
-
Menezesa CBA, Bonugli-Santosa RC, Miquelettoa PB, Passarinia MRZ, Silvaa CHD, Justoa MR, Leala MR, Fantinatti-Garbogginia F, Oliveiraa VM, Berlinckb RGS, Sette LD (2010) Microbial diversity associated with algae, ascidians and sponges from the north coast of São Paulo state, Brazil. Microbiol Res 165: 466-482.
-
(2010)
Microbiol Res
, vol.165
, pp. 466-482
-
-
Menezesa, C.B.A.1
Bonugli-Santosa, R.C.2
Miquelettoa, P.B.3
Passarinia, M.R.Z.4
Silvaa, C.H.D.5
Justoa, M.R.6
Leala, M.R.7
Fantinatti-Garbogginia, F.8
Oliveiraa, V.M.9
Berlinckb, R.G.S.10
Sette, L.D.11
-
41
-
-
84861891908
-
Genetic diversity, morphological uniformity and polyketide production in dinoflagellates (Amphidinium, Dinoflagellata)
-
Murray SA, Garby T, Hoppenrath M, Neilan BA (2012) Genetic diversity, morphological uniformity and polyketide production in dinoflagellates (Amphidinium, Dinoflagellata). PLoS ONE 7: e38253.
-
(2012)
PLoS ONE
, vol.7
-
-
Murray, S.A.1
Garby, T.2
Hoppenrath, M.3
Neilan, B.A.4
-
42
-
-
0032733077
-
Kluyveromyces nonfermentans sp. nov., a new yeast species isolated from the deep sea
-
Nagahama T, Hamamoto M, Nakase T, Horikoshi K (1999) Kluyveromyces nonfermentans sp. nov., a new yeast species isolated from the deep sea. Int J Syst Bacteriol 49(Pt 4): 1899-1905.
-
(1999)
Int J Syst Bacteriol
, vol.49
, Issue.Pt 4
, pp. 1899-1905
-
-
Nagahama, T.1
Hamamoto, M.2
Nakase, T.3
Horikoshi, K.4
-
43
-
-
80051952079
-
Molecular evidence that deep-branching fungi are major fungal components in deep-sea methane cold-seep sediments
-
Nagahama T, Takahashi E, Nagano Y, Abdel-Wahab MA, Miyazaki M (2011) Molecular evidence that deep-branching fungi are major fungal components in deep-sea methane cold-seep sediments. Environ Microbiol 13: 2359-2370.
-
(2011)
Environ Microbiol
, vol.13
, pp. 2359-2370
-
-
Nagahama, T.1
Takahashi, E.2
Nagano, Y.3
Abdel-Wahab, M.A.4
Miyazaki, M.5
-
44
-
-
77956498262
-
Diversity and potential antifungal properties of fungi associated with a Mediterranean sponge
-
Paz Z, Komon-Zelazowska M, Druzhinina IS, Aveskamp MM, Shnaiderman A, Aluma Y, Carmeli S, Ilan M, Yarden O (2010) Diversity and potential antifungal properties of fungi associated with a Mediterranean sponge. Fungal Divers 42: 17-26.
-
(2010)
Fungal Divers
, vol.42
, pp. 17-26
-
-
Paz, Z.1
Komon-Zelazowska, M.2
Druzhinina, I.S.3
Aveskamp, M.M.4
Shnaiderman, A.5
Aluma, Y.6
Carmeli, S.7
Ilan, M.8
Yarden, O.9
-
45
-
-
37549027613
-
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
-
Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig W, Peplies J, Glockner FO (2007) SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucl Acids Res 35: 7188-7196.
-
(2007)
Nucl Acids Res
, vol.35
, pp. 7188-7196
-
-
Pruesse, E.1
Quast, C.2
Knittel, K.3
Fuchs, B.M.4
Ludwig, W.5
Peplies, J.6
Glockner, F.O.7
-
47
-
-
20444449887
-
The molecular diversity of freshwater picoeukaryotes from an oligotrophic lake reveals diverse, distinctive and globally dispersed lineages
-
Richards TA, Vepritskiy AA, Gouliamova DE, Nierzwicki-Bauer SA (2005) The molecular diversity of freshwater picoeukaryotes from an oligotrophic lake reveals diverse, distinctive and globally dispersed lineages. Environ Microbiol 7: 1413-1425.
-
(2005)
Environ Microbiol
, vol.7
, pp. 1413-1425
-
-
Richards, T.A.1
Vepritskiy, A.A.2
Gouliamova, D.E.3
Nierzwicki-Bauer, S.A.4
-
48
-
-
34848923305
-
Marine natural products of fungal origin
-
Saleem M, Ali MS, Hussain S, Jabbar A, Ashraf M, Lee YS (2007) Marine natural products of fungal origin. Nat Prod Rep 24: 1142-1152.
-
(2007)
Nat Prod Rep
, vol.24
, pp. 1142-1152
-
-
Saleem, M.1
Ali, M.S.2
Hussain, S.3
Jabbar, A.4
Ashraf, M.5
Lee, Y.S.6
-
49
-
-
72949107142
-
Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss PD, Westcott SL, Ryabin T, Hall JR, Hartmann M, Hollister EB, Lesniewski RA, Oakley BB, Parks DH, Robinson CJ, Sahl JW, Stres B, Thallinger GG, van Horn DJ, Weber CF (2009) Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75: 7537-7541.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
Hollister, E.B.6
Lesniewski, R.A.7
Oakley, B.B.8
Parks, D.H.9
Robinson, C.J.10
Sahl, J.W.11
Stres, B.12
Thallinger, G.G.13
van Horn, D.J.14
Weber, C.F.15
-
50
-
-
84857121586
-
Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges
-
Schmitt S, Tsai P, Bell J, Fromont J, Ilan M, Lindquist N, Perez T, Rodrigo A, Schupp PJ, Vacelet J, Webster N, Hentschel U, Taylor MW (2012) Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges. ISME J 6: 564-576.
-
(2012)
ISME J
, vol.6
, pp. 564-576
-
-
Schmitt, S.1
Tsai, P.2
Bell, J.3
Fromont, J.4
Ilan, M.5
Lindquist, N.6
Perez, T.7
Rodrigo, A.8
Schupp, P.J.9
Vacelet, J.10
Webster, N.11
Hentschel, U.12
Taylor, M.W.13
-
51
-
-
84859156654
-
Deep sequencing reveals diversity and community structure of complex microbiota in five Mediterranean sponges
-
Schmitt S, Hentschel U, Taylor MW (2012) Deep sequencing reveals diversity and community structure of complex microbiota in five Mediterranean sponges. Hydrobiologia 687: 341-351.
-
(2012)
Hydrobiologia
, vol.687
, pp. 341-351
-
-
Schmitt, S.1
Hentschel, U.2
Taylor, M.W.3
-
52
-
-
84985251704
-
The morphology and development of some prominently stalked southern Australian Halymeniaceae (Cryptonemiales, Rhodophyta). II. The sponge-associated genera Thamnoclonium Kuetzing and Codiophyllum Gray
-
Scott FJ, Wetherbee R, Kraft GT (1984) The morphology and development of some prominently stalked southern Australian Halymeniaceae (Cryptonemiales, Rhodophyta). II. The sponge-associated genera Thamnoclonium Kuetzing and Codiophyllum Gray. J Phycol 20: 286-295.
-
(1984)
J Phycol
, vol.20
, pp. 286-295
-
-
Scott, F.J.1
Wetherbee, R.2
Kraft, G.T.3
-
53
-
-
84856569941
-
Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms
-
Simister RL, Deines P, Botté ES, Webster NS, Taylor MW (2012) Sponge-specific clusters revisited: a comprehensive phylogeny of sponge-associated microorganisms. Environ Microbiol 14: 517-524.
-
(2012)
Environ Microbiol
, vol.14
, pp. 517-524
-
-
Simister, R.L.1
Deines, P.2
Botté, E.S.3
Webster, N.S.4
Taylor, M.W.5
-
54
-
-
77951908579
-
Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
-
Stoeck T, Bass D, Nebel M, Christen R, Jones MD, Breiner HW, Richards TA (2010) Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water. Mol Ecol 19(Suppl 1): 21-31.
-
(2010)
Mol Ecol
, vol.19
, Issue.SUPPL. 1
, pp. 21-31
-
-
Stoeck, T.1
Bass, D.2
Nebel, M.3
Christen, R.4
Jones, M.D.5
Breiner, H.W.6
Richards, T.A.7
-
55
-
-
33745821162
-
Translocation and conservation of organic nitrogen within the coral-zooxanthella symbiotic system of Acropora pulchra, as demonstrated by dual isotope-labeling techniques
-
Tanaka Y, Miyajima T, Koike I, Hayashibara T, Ogawa H (2006) Translocation and conservation of organic nitrogen within the coral-zooxanthella symbiotic system of Acropora pulchra, as demonstrated by dual isotope-labeling techniques. J Exp Mar Bio Ecol 336: 110-119.
-
(2006)
J Exp Mar Bio Ecol
, vol.336
, pp. 110-119
-
-
Tanaka, Y.1
Miyajima, T.2
Koike, I.3
Hayashibara, T.4
Ogawa, H.5
-
56
-
-
1142306012
-
Host specificity in marine sponge-associated bacteria, and potential implications for marine microbial diversity
-
Taylor MW, Schupp PJ, Dahllof I, Kjelleberg S, Steinberg PD (2004) Host specificity in marine sponge-associated bacteria, and potential implications for marine microbial diversity. Environ Microbiol 6: 121-130.
-
(2004)
Environ Microbiol
, vol.6
, pp. 121-130
-
-
Taylor, M.W.1
Schupp, P.J.2
Dahllof, I.3
Kjelleberg, S.4
Steinberg, P.D.5
-
57
-
-
34250733462
-
Sponge-associated microorganisms: evolution, ecology, and biotechnological potential
-
Taylor MW, Radax R, Steger D, Wagner M (2007) Sponge-associated microorganisms: evolution, ecology, and biotechnological potential. Microbiol Mol Biol Rev 71: 295-347.
-
(2007)
Microbiol Mol Biol Rev
, vol.71
, pp. 295-347
-
-
Taylor, M.W.1
Radax, R.2
Steger, D.3
Wagner, M.4
-
58
-
-
84872914192
-
Sponge-specific' bacteria are widespread (but rare) in diverse marine environments
-
Taylor MW, Tsai P, Simister RL, Deines P, Botte E, Ericson G, Schmitt S, Webster NS (2013) 'Sponge-specific' bacteria are widespread (but rare) in diverse marine environments. ISME J 7: 438-443.
-
(2013)
ISME J
, vol.7
, pp. 438-443
-
-
Taylor, M.W.1
Tsai, P.2
Simister, R.L.3
Deines, P.4
Botte, E.5
Ericson, G.6
Schmitt, S.7
Webster, N.S.8
-
59
-
-
77951499077
-
Analysis of foraminifera assemblages and sediment geochemical properties to characterise the environment near Araca and Saco da Capela domestic sewage submarine outfalls of Sao Sebastiao Channel, Sao Paulo State, Brazil
-
Teodoro AC, Duleba W, Gubitoso S, Prada SM, Lamparelli CC, Bevilacqua JE (2010) Analysis of foraminifera assemblages and sediment geochemical properties to characterise the environment near Araca and Saco da Capela domestic sewage submarine outfalls of Sao Sebastiao Channel, Sao Paulo State, Brazil. Mar Pollut Bull 60: 536-553.
-
(2010)
Mar Pollut Bull
, vol.60
, pp. 536-553
-
-
Teodoro, A.C.1
Duleba, W.2
Gubitoso, S.3
Prada, S.M.4
Lamparelli, C.C.5
Bevilacqua, J.E.6
-
60
-
-
84864915561
-
Fungal symbionts of marine sponges from Rameswaram, southern India: species composition and bioactive metabolites
-
Thirunavukkarasu N, Suryanarayanan T, Girivasan KP, Venkatachalam A, Geetha V, Ravishankar JP, Doble M (2012) Fungal symbionts of marine sponges from Rameswaram, southern India: species composition and bioactive metabolites. Fungal Divers 55: 37-46.
-
(2012)
Fungal Divers
, vol.55
, pp. 37-46
-
-
Thirunavukkarasu, N.1
Suryanarayanan, T.2
Girivasan, K.P.3
Venkatachalam, A.4
Geetha, V.5
Ravishankar, J.P.6
Doble, M.7
-
62
-
-
44449097248
-
The inner livers of sponges
-
Vogel G (2008) The inner livers of sponges. Science 320: 1028-1030.
-
(2008)
Science
, vol.320
, pp. 1028-1030
-
-
Vogel, G.1
-
63
-
-
37449004156
-
Phylogenetic diversity of culturable fungi associated with the Hawaiian sponges Suberites zeteki and Gelliodes fibrosa
-
Wang G, Li Q, Zhu P (2008) Phylogenetic diversity of culturable fungi associated with the Hawaiian sponges Suberites zeteki and Gelliodes fibrosa. Antonie Leeuwenhoek 93: 163-174.
-
(2008)
Antonie Leeuwenhoek
, vol.93
, pp. 163-174
-
-
Wang, G.1
Li, Q.2
Zhu, P.3
-
64
-
-
77955263252
-
Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts
-
Webster NS, Taylor MW, Behnam F, Lucker S, Rattei T, Whalan S, Horn M, Wagner M (2010) Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts. Environ Microbiol 12: 2070-2082.
-
(2010)
Environ Microbiol
, vol.12
, pp. 2070-2082
-
-
Webster, N.S.1
Taylor, M.W.2
Behnam, F.3
Lucker, S.4
Rattei, T.5
Whalan, S.6
Horn, M.7
Wagner, M.8
-
65
-
-
79955628963
-
Phylogenetic identification of fungi isolated from the marine sponge Tethya aurantium and identification of their secondary metabolites
-
Wiese J, Ohlendorf B, Blümel M, Schmaljohann R, Imhoff JF (2011) Phylogenetic identification of fungi isolated from the marine sponge Tethya aurantium and identification of their secondary metabolites. Mar Drugs 9: 561-585.
-
(2011)
Mar Drugs
, vol.9
, pp. 561-585
-
-
Wiese, J.1
Ohlendorf, B.2
Blümel, M.3
Schmaljohann, R.4
Imhoff, J.F.5
-
66
-
-
79952115614
-
The secondary metabolites of the mangrove endophytic fungi ZZF13 and Guignardia sp. 4382 from the South China Sea
-
Xia X-K, Liu C-H, Yuan W-P, Wang X-J, Meng X-M, Zhang M-S, She Z-G, Lin Y-C (2009) The secondary metabolites of the mangrove endophytic fungi ZZF13 and Guignardia sp. 4382 from the South China Sea. Zhong Yao Cai 32: 1385-1387.
-
(2009)
Zhong Yao Cai
, vol.32
, pp. 1385-1387
-
-
Xia, X.-K.1
Liu, C.-H.2
Yuan, W.-P.3
Wang, X.-J.4
Meng, X.-M.5
Zhang, M.-S.6
She, Z.-G.7
Lin, Y.-C.8
-
67
-
-
33947235074
-
The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families
-
Yooseph S, Sutton G, Rusch DB, Halpern AL, Williamson SJ, Remington K, Eisen JA, Heidelberg KB, Manning G, Li W, Jaroszewski L, Cieplak P, Miller CS, Li H, Mashiyama ST, Joachimiak MP, van Belle C, Chandonia JM, Soergel DA, Zhai Y, Natarajan K, Lee S, Raphael BJ, Bafna V, Friedman R, Brenner SE, Godzik A, Eisenberg D, Dixon JE, Taylor SS, Strausberg RL, Frazier M, Venter JC (2007) The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families. PLoS Biol 5: e16.
-
(2007)
PLoS Biol
, vol.5
-
-
Yooseph, S.1
Sutton, G.2
Rusch, D.B.3
Halpern, A.L.4
Williamson, S.J.5
Remington, K.6
Eisen, J.A.7
Heidelberg, K.B.8
Manning, G.9
Li, W.10
Jaroszewski, L.11
Cieplak, P.12
Miller, C.S.13
Li, H.14
Mashiyama, S.T.15
Joachimiak, M.P.16
van Belle, C.17
Chandonia, J.M.18
Soergel, D.A.19
Zhai, Y.20
Natarajan, K.21
Lee, S.22
Raphael, B.J.23
Bafna, V.24
Friedman, R.25
Brenner, S.E.26
Godzik, A.27
Eisenberg, D.28
Dixon, J.E.29
Taylor, S.S.30
Strausberg, R.L.31
Frazier, M.32
Venter, J.C.33
more..
-
68
-
-
84872477412
-
Phylogenetically diverse endozoic fungi in the South China Sea sponges and their potential in synthesizing bioactive natural products suggested by PKS gene and cytotoxic activity analysis
-
Yu Z, Zhang B, Sun W, Zhang F, Li Z (2013) Phylogenetically diverse endozoic fungi in the South China Sea sponges and their potential in synthesizing bioactive natural products suggested by PKS gene and cytotoxic activity analysis. Fungal Divers 58: 127-141.
-
(2013)
Fungal Divers
, vol.58
, pp. 127-141
-
-
Yu, Z.1
Zhang, B.2
Sun, W.3
Zhang, F.4
Li, Z.5
-
69
-
-
84868000710
-
Phylogenetic survey and antimicrobial activity of culturable microorganisms associated with the South China Sea black coral Antipathes dichotoma
-
Zhang X, Sun Y, Bao J, He F, Xu X, Qi S (2012) Phylogenetic survey and antimicrobial activity of culturable microorganisms associated with the South China Sea black coral Antipathes dichotoma. FEMS Microbiol Lett 336: 122-130.
-
(2012)
FEMS Microbiol Lett
, vol.336
, pp. 122-130
-
-
Zhang, X.1
Sun, Y.2
Bao, J.3
He, F.4
Xu, X.5
Qi, S.6
-
70
-
-
80052879324
-
Phylogenetically diverse cultivable fungal community and polyketide synthase (PKS), non-ribosomal peptide synthase (NRPS) genes associated with the South China Sea sponges
-
Zhou K, Zhang X, Zhang F, Li Z (2011) Phylogenetically diverse cultivable fungal community and polyketide synthase (PKS), non-ribosomal peptide synthase (NRPS) genes associated with the South China Sea sponges. Microb Ecol 62: 644-654.
-
(2011)
Microb Ecol
, vol.62
, pp. 644-654
-
-
Zhou, K.1
Zhang, X.2
Zhang, F.3
Li, Z.4
-
71
-
-
84866134182
-
The epiphytic microbiota of the globally widespread macroalga Cladophora glomerata (Chlorophyta, Cladophorales)
-
Zulkifly S, Hanshew A, Young EB, Lee P, Graham ME, Piotrowski M, Graham LE (2012) The epiphytic microbiota of the globally widespread macroalga Cladophora glomerata (Chlorophyta, Cladophorales). Am J Bot 99: 1541-1552.
-
(2012)
Am J Bot
, vol.99
, pp. 1541-1552
-
-
Zulkifly, S.1
Hanshew, A.2
Young, E.B.3
Lee, P.4
Graham, M.E.5
Piotrowski, M.6
Graham, L.E.7
|