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Volumn 426, Issue 9, 2014, Pages 1995-2008

Structural and functional analysis of the GerD spore germination protein of bacillus species

Author keywords

Bacillus; GerD; germinant receptors; spore germination; spores

Indexed keywords

BACTERIAL PROTEIN; GERD PROTEIN; UNCLASSIFIED DRUG;

EID: 84897977904     PISSN: 00222836     EISSN: 10898638     Source Type: Journal    
DOI: 10.1016/j.jmb.2014.02.004     Document Type: Article
Times cited : (20)

References (49)
  • 1
    • 79952465087 scopus 로고    scopus 로고
    • Germination of spores of Bacillales and Clostridiales species: Mechanisms and proteins involved
    • D. Paredes-Sabja, P. Setlow, and M.R. Sarker Germination of spores of Bacillales and Clostridiales species: mechanisms and proteins involved Trends Microbiol 19 2010 85 94
    • (2010) Trends Microbiol , vol.19 , pp. 85-94
    • Paredes-Sabja, D.1    Setlow, P.2    Sarker, M.R.3
  • 2
    • 33744733251 scopus 로고    scopus 로고
    • Spores of Bacillus subtilis: Their resistance to and killing by radiation, heat and chemicals
    • P. Setlow Spores of Bacillus subtilis: their resistance to and killing by radiation, heat and chemicals J Appl Microbiol 101 2006 514 525
    • (2006) J Appl Microbiol , vol.101 , pp. 514-525
    • Setlow, P.1
  • 3
    • 0347364722 scopus 로고    scopus 로고
    • Spore germination
    • P. Setlow Spore germination Curr Opin Microbiol 6 2003 550 556
    • (2003) Curr Opin Microbiol , vol.6 , pp. 550-556
    • Setlow, P.1
  • 4
    • 33747106140 scopus 로고    scopus 로고
    • How do spores germinate?
    • A. Moir How do spores germinate? J Appl Microbiol 101 2006 526 530
    • (2006) J Appl Microbiol , vol.101 , pp. 526-530
    • Moir, A.1
  • 5
    • 78349267621 scopus 로고    scopus 로고
    • The Ger receptor family from sporulating bacteria
    • C. Ross, and E. Abel-Santos The Ger receptor family from sporulating bacteria Curr Issues Mol Biol 12 2010 147 158
    • (2010) Curr Issues Mol Biol , vol.12 , pp. 147-158
    • Ross, C.1    Abel-Santos, E.2
  • 6
    • 84861220009 scopus 로고    scopus 로고
    • Spores and their significance
    • M.P. Doyle, R.L. Buchanan, 4th ed. ASM Press Washington, DC
    • P. Setlow, and E.A. Johnson Spores and their significance M.P. Doyle, R.L. Buchanan, Food microbiology: fundamentals and frontiers 4th ed. 2012 ASM Press Washington, DC 45 79
    • (2012) Food Microbiology: Fundamentals and Frontiers , pp. 45-79
    • Setlow, P.1    Johnson, E.A.2
  • 7
    • 0002527560 scopus 로고    scopus 로고
    • Spore germination and outgrowth
    • A.L. Sonenshein, J.A. Hoch, R. Losick, ASM Press Washington, DC
    • M. Paidhungat, and P. Setlow Spore germination and outgrowth A.L. Sonenshein, J.A. Hoch, R. Losick, Bacillus subtilis and its relative: from genes to cells 2002 ASM Press Washington, DC 537 548
    • (2002) Bacillus Subtilis and Its Relative: From Genes to Cells , pp. 537-548
    • Paidhungat, M.1    Setlow, P.2
  • 8
    • 84861213261 scopus 로고    scopus 로고
    • Role of a SpoVA protein in dipicolinic acid uptake into developing spores of Bacillus subtilis
    • Y. Li, A. Davis, G. Korza, P. Zhang, Y.Q. Li, and B. Setlow Role of a SpoVA protein in dipicolinic acid uptake into developing spores of Bacillus subtilis J Bacteriol 194 2012 1875 1884
    • (2012) J Bacteriol , vol.194 , pp. 1875-1884
    • Li, Y.1    Davis, A.2    Korza, G.3    Zhang, P.4    Li, Y.Q.5    Setlow, B.6
  • 9
    • 33947369915 scopus 로고    scopus 로고
    • Role of SpoVA proteins in release of dipicolinic acid during germination of Bacillus subtilis spores triggered by dodecylamine or lysozyme
    • V.R. Vepachedu, and P. Setlow Role of SpoVA proteins in release of dipicolinic acid during germination of Bacillus subtilis spores triggered by dodecylamine or lysozyme J Bacteriol 189 2007 1565 1572
    • (2007) J Bacteriol , vol.189 , pp. 1565-1572
    • Vepachedu, V.R.1    Setlow, P.2
  • 10
    • 77954351126 scopus 로고    scopus 로고
    • Studies of the commitment step in the germination of spores of Bacillus species
    • X. Yi, and P. Setlow Studies of the commitment step in the germination of spores of Bacillus species J Bacteriol 192 2010 3424 3433
    • (2010) J Bacteriol , vol.192 , pp. 3424-3433
    • Yi, X.1    Setlow, P.2
  • 11
    • 33846626982 scopus 로고    scopus 로고
    • Role of GerD in germination of Bacillus subtilis spores
    • P.L. Pelczar, T. Igarashi, B. Setlow, and P. Setlow Role of GerD in germination of Bacillus subtilis spores J Bacteriol 189 2007 1090 1098
    • (2007) J Bacteriol , vol.189 , pp. 1090-1098
    • Pelczar, P.L.1    Igarashi, T.2    Setlow, B.3    Setlow, P.4
  • 12
    • 80051569482 scopus 로고    scopus 로고
    • Germination proteins in the inner membrane of dormant Bacillus subtilis spores colocalize in a discrete cluster
    • K.K. Griffiths, J. Zhang, A.E. Cowan, J. Yu, and P. Setlow Germination proteins in the inner membrane of dormant Bacillus subtilis spores colocalize in a discrete cluster Mol Microbiol 81 2011 1061 1077
    • (2011) Mol Microbiol , vol.81 , pp. 1061-1077
    • Griffiths, K.K.1    Zhang, J.2    Cowan, A.E.3    Yu, J.4    Setlow, P.5
  • 13
    • 33747187232 scopus 로고    scopus 로고
    • Subcellular localization of a germination-specific cortex-lytic enzyme, SleB, of Bacilli during sporulation
    • A. Masayama, H. Fukuoka, S. Kato, T. Yoshimura, M. Moriyama, and R. Moriyama Subcellular localization of a germination-specific cortex-lytic enzyme, SleB, of Bacilli during sporulation Genes Genet Syst 81 2006 163 169
    • (2006) Genes Genet Syst , vol.81 , pp. 163-169
    • Masayama, A.1    Fukuoka, H.2    Kato, S.3    Yoshimura, T.4    Moriyama, M.5    Moriyama, R.6
  • 14
    • 0025814707 scopus 로고
    • Analysis of transcriptional control of the gerD spore germination gene of Bacillus subtilis 168
    • E.H. Kemp, R.L. Sammons, A. Moir, D. Sun, and P. Setlow Analysis of transcriptional control of the gerD spore germination gene of Bacillus subtilis 168 J Bacteriol 173 1991 4646 4652
    • (1991) J Bacteriol , vol.173 , pp. 4646-4652
    • Kemp, E.H.1    Sammons, R.L.2    Moir, A.3    Sun, D.4    Setlow, P.5
  • 15
    • 65649117789 scopus 로고    scopus 로고
    • Localization of the GerD spore germination protein in the Bacillus subtilis spore
    • W. Mongkolthanaruk, C. Robinson, and A. Moir Localization of the GerD spore germination protein in the Bacillus subtilis spore Microbiology 155 2009 1146 1151
    • (2009) Microbiology , vol.155 , pp. 1146-1151
    • Mongkolthanaruk, W.1    Robinson, C.2    Moir, A.3
  • 16
    • 49449111021 scopus 로고    scopus 로고
    • Localization of the germination protein GerD to the inner membrane in Bacillus subtilis spores
    • P.L. Pelczar, and P. Setlow Localization of the germination protein GerD to the inner membrane in Bacillus subtilis spores J Bacteriol 190 2008 5635 5641
    • (2008) J Bacteriol , vol.190 , pp. 5635-5641
    • Pelczar, P.L.1    Setlow, P.2
  • 17
    • 84875520147 scopus 로고    scopus 로고
    • Topology and accessibility of germination proteins in the Bacillus subtilis spore inner membrane
    • G. Korza, and P. Setlow Topology and accessibility of germination proteins in the Bacillus subtilis spore inner membrane J Bacteriol 195 2013 1484 1491
    • (2013) J Bacteriol , vol.195 , pp. 1484-1491
    • Korza, G.1    Setlow, P.2
  • 19
    • 0002732819 scopus 로고
    • Compound helical configurations of polypeptide chains: Structure of proteins of the alpha-keratin type
    • L. Pauling, and R.B. Corey Compound helical configurations of polypeptide chains: structure of proteins of the alpha-keratin type Nature 171 1953 59 61
    • (1953) Nature , vol.171 , pp. 59-61
    • Pauling, L.1    Corey, R.B.2
  • 20
    • 0026609553 scopus 로고
    • The two-stranded alpha-helical coiled-coil is an ideal model for studying protein stability and subunit interactions
    • N.E. Zhou, B.Y. Zhu, C.M. Kay, and R.S. Hodges The two-stranded alpha-helical coiled-coil is an ideal model for studying protein stability and subunit interactions Biopolymers 32 1992 419 426
    • (1992) Biopolymers , vol.32 , pp. 419-426
    • Zhou, N.E.1    Zhu, B.Y.2    Kay, C.M.3    Hodges, R.S.4
  • 22
    • 48449106792 scopus 로고    scopus 로고
    • The Jpred 3 secondary structure prediction server
    • C. Cole, J.D. Barber, and G.J. Barton The Jpred 3 secondary structure prediction server Nucleic Acids Res 36 2008 W197 W201
    • (2008) Nucleic Acids Res , vol.36
    • Cole, C.1    Barber, J.D.2    Barton, G.J.3
  • 23
    • 0024278714 scopus 로고
    • Helix geometry in proteins
    • D.J. Barlow, and J.M. Thornton Helix geometry in proteins J Mol Biol 201 1988 601 619
    • (1988) J Mol Biol , vol.201 , pp. 601-619
    • Barlow, D.J.1    Thornton, J.M.2
  • 24
    • 0027996196 scopus 로고
    • Crystal and molecular structure of a collagen-like peptide at 1.9 Å resolution
    • J. Bella, M. Eaton, B. Brodsky, and H.M. Berman Crystal and molecular structure of a collagen-like peptide at 1.9 Å resolution Science 266 1994 75 81
    • (1994) Science , vol.266 , pp. 75-81
    • Bella, J.1    Eaton, M.2    Brodsky, B.3    Berman, H.M.4
  • 25
    • 0030963588 scopus 로고    scopus 로고
    • The collagen triple-helix structure
    • B. Brodsky, and J.A. Ramshaw The collagen triple-helix structure Matrix Biol 15 1997 545 554
    • (1997) Matrix Biol , vol.15 , pp. 545-554
    • Brodsky, B.1    Ramshaw, J.A.2
  • 26
    • 84859467505 scopus 로고    scopus 로고
    • Implications for collagen i chain registry from the structure of the collagen von Willebrand factor A3 domain complex
    • T.H. Brondijk, D. Bihan, R.W. Farndale, and E.G. Huizinga Implications for collagen I chain registry from the structure of the collagen von Willebrand factor A3 domain complex Proc Natl Acad Sci U S A 109 2012 5253 5258
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 5253-5258
    • Brondijk, T.H.1    Bihan, D.2    Farndale, R.W.3    Huizinga, E.G.4
  • 27
    • 77956177163 scopus 로고    scopus 로고
    • Crystal structure of the GerBC component of a Bacillus subtilis spore germinant receptor
    • Y. Li, B. Setlow, P. Setlow, and B. Hao Crystal structure of the GerBC component of a Bacillus subtilis spore germinant receptor J Mol Biol 402 2010 8 16
    • (2010) J Mol Biol , vol.402 , pp. 8-16
    • Li, Y.1    Setlow, B.2    Setlow, P.3    Hao, B.4
  • 28
    • 0034644538 scopus 로고    scopus 로고
    • Translocation and reversible localization of signaling proteins: A dynamic future for signal transduction
    • M.N. Teruel, and T. Meyer Translocation and reversible localization of signaling proteins: a dynamic future for signal transduction Cell 103 2000 181 184
    • (2000) Cell , vol.103 , pp. 181-184
    • Teruel, M.N.1    Meyer, T.2
  • 31
    • 0027439390 scopus 로고
    • Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin
    • G.D. Van Duyne, R.F. Standaert, P.A. Karplus, S.L. Schreiber, and J. Clardy Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin J Mol Biol 229 1993 105 124
    • (1993) J Mol Biol , vol.229 , pp. 105-124
    • Van Duyne, G.D.1    Standaert, R.F.2    Karplus, P.A.3    Schreiber, S.L.4    Clardy, J.5
  • 32
    • 0016169865 scopus 로고
    • Determination of the helix and beta form of proteins in aqueous solution by circular dichroism
    • Y.H. Chen, J.T. Yang, and K.H. Chau Determination of the helix and beta form of proteins in aqueous solution by circular dichroism Biochemistry 13 1974 3350 3359
    • (1974) Biochemistry , vol.13 , pp. 3350-3359
    • Chen, Y.H.1    Yang, J.T.2    Chau, K.H.3
  • 33
    • 0002498995 scopus 로고
    • Computer-aided interpretation of analytical sedimentation data for proteins
    • S. Harding, A. Rowe, J. Horton, Royal Society of Chemistry Cambridge, UK
    • T.M. Laue, B.D. Shah, T.M. Ridgeway, and S.L. Pelletier Computer-aided interpretation of analytical sedimentation data for proteins S. Harding, A. Rowe, J. Horton, Analytical ultracentrifugation in biochemistry and polymer science 1992 Royal Society of Chemistry Cambridge, UK 90 125
    • (1992) Analytical Ultracentrifugation in Biochemistry and Polymer Science , pp. 90-125
    • Laue, T.M.1    Shah, B.D.2    Ridgeway, T.M.3    Pelletier, S.L.4
  • 34
    • 84881004217 scopus 로고    scopus 로고
    • Numbers of individual nutrient germinant receptors and other germination proteins in spores of Bacillus subtilis
    • K.A. Stewart, and P. Setlow Numbers of individual nutrient germinant receptors and other germination proteins in spores of Bacillus subtilis J Bacteriol 195 2013 3575 3582
    • (2013) J Bacteriol , vol.195 , pp. 3575-3582
    • Stewart, K.A.1    Setlow, P.2
  • 35
    • 84861218321 scopus 로고    scopus 로고
    • Levels of germination proteins in dormant and superdormant spores of Bacillus subtilis
    • S. Ghosh, M. Scotland, and P. Setlow Levels of germination proteins in dormant and superdormant spores of Bacillus subtilis J Bacteriol 194 2012 2221 2227
    • (2012) J Bacteriol , vol.194 , pp. 2221-2227
    • Ghosh, S.1    Scotland, M.2    Setlow, P.3
  • 36
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray diffraction data collected in oscillation mode
    • Z. Otwinowski, and W. Minor Processing of X-ray diffraction data collected in oscillation mode Methods Enzymol 276 1997 307 326
    • (1997) Methods Enzymol , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 40
    • 0013461295 scopus 로고    scopus 로고
    • Macromolecular TLS refinement in REFMAC at moderate resolutions
    • M.D. Winn, G.N. Murshudov, and M.Z. Papiz Macromolecular TLS refinement in REFMAC at moderate resolutions Methods Enzymol 374 2003 300 321
    • (2003) Methods Enzymol , vol.374 , pp. 300-321
    • Winn, M.D.1    Murshudov, G.N.2    Papiz, M.Z.3
  • 42
    • 0001864545 scopus 로고
    • Sporulation, germination and outgrowth
    • C.R. Harwood, S.M. Cutting, John Wiley and Sons Chichester, UK
    • W.L. Nicholson, and P. Setlow Sporulation, germination and outgrowth C.R. Harwood, S.M. Cutting, Molecular biological methods for Bacillus 1990 John Wiley and Sons Chichester, UK 391 450
    • (1990) Molecular Biological Methods for Bacillus , pp. 391-450
    • Nicholson, W.L.1    Setlow, P.2
  • 44
    • 0029890426 scopus 로고    scopus 로고
    • Role of DNA repair in Bacillus subtilis spore resistance
    • B. Setlow, and P. Setlow Role of DNA repair in Bacillus subtilis spore resistance J Bacteriol 178 1996 3486 3495
    • (1996) J Bacteriol , vol.178 , pp. 3486-3495
    • Setlow, B.1    Setlow, P.2
  • 45
    • 0018332814 scopus 로고
    • Genetics analysis of spore germination mutants of Bacillus subtilis 168: The correlation of phenotype with map location
    • A. Moir, E. Lafferty, and D.A. Smith Genetics analysis of spore germination mutants of Bacillus subtilis 168: the correlation of phenotype with map location J Gen Microbiol 111 1979 165 180
    • (1979) J Gen Microbiol , vol.111 , pp. 165-180
    • Moir, A.1    Lafferty, E.2    Smith, D.A.3
  • 47
    • 0033994521 scopus 로고    scopus 로고
    • Role of ger proteins in nutrient and nonnutrient triggering of spore germination in Bacillus subtilis
    • M. Paidhungat, and P. Setlow Role of ger proteins in nutrient and nonnutrient triggering of spore germination in Bacillus subtilis J Bacteriol 182 2000 2513 2519
    • (2000) J Bacteriol , vol.182 , pp. 2513-2519
    • Paidhungat, M.1    Setlow, P.2
  • 49
    • 2342499098 scopus 로고    scopus 로고
    • Effects of a gerF (lgt) mutation on the germination of spores of Bacillus subtilis
    • T. Igarashi, B. Setlow, M. Paidhungat, and P. Setlow Effects of a gerF (lgt) mutation on the germination of spores of Bacillus subtilis J Bacteriol 186 2004 2984 2991
    • (2004) J Bacteriol , vol.186 , pp. 2984-2991
    • Igarashi, T.1    Setlow, B.2    Paidhungat, M.3    Setlow, P.4


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