메뉴 건너뛰기




Volumn 5, Issue MAR, 2014, Pages

The microbial nitrogen cycling potential is impacted by polyaromatic hydrocarbon pollution of marine sediments

Author keywords

Deepwater horizon oil spill; Denitrification; Marine sediments; Metagenomics; Microbial ecology; Nitrogen cycling; Oil contamination; Oil seeps

Indexed keywords

POLYCYCLIC AROMATIC HYDROCARBON;

EID: 84897931225     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2014.00108     Document Type: Article
Times cited : (67)

References (50)
  • 1
    • 0025900648 scopus 로고
    • Microbial hydrocarbon degradation-bioremediation of oil spills
    • doi: 10.1002/jctb.280520202
    • Atlas, R. M. (1991). Microbial hydrocarbon degradation-bioremediation of oil spills. J. Chem. Technol. Biotechnol. 52, 149-156. doi: 10.1002/jctb.280520202.
    • (1991) J. Chem. Technol. Biotechnol. , vol.52 , pp. 149-156
    • Atlas, R.M.1
  • 2
    • 84865740210 scopus 로고    scopus 로고
    • Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill
    • doi: 10.1111/j.1462-2920.2012.02780.x
    • Bælum, J., Borglin, S., Chakraborty, R., Fortney, J. L., Lamendella, R., Mason, O. U., et al. (2012). Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill. Environ. Microbiol. 14, 2405-2416. doi: 10.1111/j.1462-2920.2012.02780.x.
    • (2012) Environ. Microbiol. , vol.14 , pp. 2405-2416
    • Bælum, J.1    Borglin, S.2    Chakraborty, R.3    Fortney, J.L.4    Lamendella, R.5    Mason, O.U.6
  • 3
    • 79960093432 scopus 로고    scopus 로고
    • Identification of nitrogen-incorporating bacteria in petroleum-contaminated arctic soils by using [15N]DNA-based stable isotope probing and pyrosequencing
    • doi: 10.1128/AEM.00172-11
    • Bell, T. H., Yergeau, E., Martineau, C., Juck, D., Whyte, L. G., and Greer, C. W. (2011). Identification of nitrogen-incorporating bacteria in petroleum-contaminated arctic soils by using [15N]DNA-based stable isotope probing and pyrosequencing. Appl. Environ. Microbiol. 77, 4163-4171. doi: 10.1128/AEM.00172-11.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 4163-4171
    • Bell, T.H.1    Yergeau, E.2    Martineau, C.3    Juck, D.4    Whyte, L.G.5    Greer, C.W.6
  • 5
    • 35148828953 scopus 로고    scopus 로고
    • Effects of heavy fuel oil on the bacterial community structure of a pristine microbial mat
    • doi: 10.1128/AEM.01352-07
    • Bordenave, S., Goñi-Urriza, M. S., Caumette, P., and Duran, R. (2007). Effects of heavy fuel oil on the bacterial community structure of a pristine microbial mat. Appl. Environ. Microbiol. 73, 6089-6097. doi: 10.1128/AEM.01352-07.
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 6089-6097
    • Bordenave, S.1    Goñi-Urriza, M.S.2    Caumette, P.3    Duran, R.4
  • 6
    • 33847752606 scopus 로고    scopus 로고
    • New developments in the marine nitrogen cycle
    • doi: 10.1021/cr050377t
    • Brandes, J. A., Devol, A. H., and Deutsch, C. (2007). New developments in the marine nitrogen cycle. Chem. Rev. 107, 577-589. doi: 10.1021/cr050377t.
    • (2007) Chem. Rev. , vol.107 , pp. 577-589
    • Brandes, J.A.1    Devol, A.H.2    Deutsch, C.3
  • 7
    • 0034793358 scopus 로고    scopus 로고
    • Biodegradation of diesel fuel in soil under various nitrogen addition regimes
    • doi: 10.1080/20015891109428
    • Brook, T. R., Stiver, W. H., and Zytner, R. G. (2001). Biodegradation of diesel fuel in soil under various nitrogen addition regimes. Soil Sediment Contam. Int. J. 10, 539-553. doi: 10.1080/20015891109428.
    • (2001) Soil Sediment Contam. Int. J. , vol.10 , pp. 539-553
    • Brook, T.R.1    Stiver, W.H.2    Zytner, R.G.3
  • 8
    • 77957744758 scopus 로고    scopus 로고
    • The evolution and future of earth's nitrogen cycle
    • doi: 10.1126/science.1186120
    • Canfield, D. E., Glazer, A. N., and Falkowski, P. G. (2010). The evolution and future of earth's nitrogen cycle. Science 330, 192-196. doi: 10.1126/science.1186120.
    • (2010) Science , vol.330 , pp. 192-196
    • Canfield, D.E.1    Glazer, A.N.2    Falkowski, P.G.3
  • 9
    • 18144382963 scopus 로고    scopus 로고
    • Anaerobic ammonium oxidation (anammox) in the marine environment
    • doi: 10.1016/j.resmic.2005.01.011
    • Dalsgaard, T., Thamdrup, B., and Canfield, D. E. (2005). Anaerobic ammonium oxidation (anammox) in the marine environment. Res. Microbiol. 156, 457-464. doi: 10.1016/j.resmic.2005.01.011.
    • (2005) Res. Microbiol. , vol.156 , pp. 457-464
    • Dalsgaard, T.1    Thamdrup, B.2    Canfield, D.E.3
  • 10
    • 0032824379 scopus 로고    scopus 로고
    • Nitrification and autotrophic nitrifying bacteria in a hydrocarbon-polluted soil
    • Deni, J., and Penninckx, M. J. (1999). Nitrification and autotrophic nitrifying bacteria in a hydrocarbon-polluted soil. Appl. Environ. Microbiol. 65, 4008-4013.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 4008-4013
    • Deni, J.1    Penninckx, M.J.2
  • 11
    • 66249110685 scopus 로고    scopus 로고
    • Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne Estuary, United Kingdom)
    • doi: 10.1128/AEM.02511-08
    • Dong, L. F., Smith, C. J., Papaspyrou, S., Stott, A., Osborn, A. M., and Nedwell, D. B. (2009). Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne Estuary, United Kingdom). Appl. Environ. Microbiol. 75, 3171-3179. doi: 10.1128/AEM.02511-08.
    • (2009) Appl. Environ. Microbiol. , vol.75 , pp. 3171-3179
    • Dong, L.F.1    Smith, C.J.2    Papaspyrou, S.3    Stott, A.4    Osborn, A.M.5    Nedwell, D.B.6
  • 12
    • 0036793748 scopus 로고    scopus 로고
    • Free-living heterotrophic nitrogen-fixing bacteria isolated from fuel-contaminated Antarctic soils
    • doi: 10.1128/AEM.68.10.5181-5185.2002
    • Eckford, R., Cook, F. D., Saul, D., Aislabie, J., and Foght, J. (2002). Free-living heterotrophic nitrogen-fixing bacteria isolated from fuel-contaminated Antarctic soils. Appl. Environ. Microbiol. 68, 5181-5185. doi: 10.1128/AEM.68.10.5181-5185.2002.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 5181-5185
    • Eckford, R.1    Cook, F.D.2    Saul, D.3    Aislabie, J.4    Foght, J.5
  • 13
    • 67949101899 scopus 로고    scopus 로고
    • Anaerobic ammonium oxidation in deep-sea sediments off the Washington margin
    • doi: 10.4319/lo.2009.54.5.1643
    • Engström, P., Penton, C. R., and Devol, A. H. (2009). Anaerobic ammonium oxidation in deep-sea sediments off the Washington margin. Limnol. Oceanogr. 54, 1643-1652. doi: 10.4319/lo.2009.54.5.1643.
    • (2009) Limnol. Oceanogr. , vol.54 , pp. 1643-1652
    • Engström, P.1    Penton, C.R.2    Devol, A.H.3
  • 14
    • 17444397420 scopus 로고    scopus 로고
    • Anaerobic ammonium oxidation by nitrite (anammox): implications for N2 production in coastal marine sediments
    • doi: 10.1016/j.gca.2004.09.032
    • Engström, P., Dalsgaard, T., Hulth, S., and Aller, R. C. (2005). Anaerobic ammonium oxidation by nitrite (anammox): implications for N2 production in coastal marine sediments. Geochim. Cosmochim. Acta 69, 2057-2065. doi: 10.1016/j.gca.2004.09.032.
    • (2005) Geochim. Cosmochim. Acta , vol.69 , pp. 2057-2065
    • Engström, P.1    Dalsgaard, T.2    Hulth, S.3    Aller, R.C.4
  • 15
    • 84886727312 scopus 로고    scopus 로고
    • Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP
    • doi: 10.1038/ismej.2013.98
    • Gutierrez, T., Singleton, D. R., Berry, D., Yang, T., Aitken, M. D., and Teske, A. (2013). Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP. ISME J. 7, 2091-2104. doi: 10.1038/ismej.2013.98.
    • (2013) ISME J. , vol.7 , pp. 2091-2104
    • Gutierrez, T.1    Singleton, D.R.2    Berry, D.3    Yang, T.4    Aitken, M.D.5    Teske, A.6
  • 16
    • 84876948105 scopus 로고    scopus 로고
    • Deep-sea nutrient loss inferred from the marine dissolved N2/Ar ratio
    • doi: 10.1002/grl.50275
    • Hamme, R. C., and Emerson, S. R. (2013). Deep-sea nutrient loss inferred from the marine dissolved N2/Ar ratio. Geophys. Res. Lett. 40, 1149-1153. doi: 10.1002/grl.50275.
    • (2013) Geophys. Res. Lett. , vol.40 , pp. 1149-1153
    • Hamme, R.C.1    Emerson, S.R.2
  • 17
    • 84893384035 scopus 로고    scopus 로고
    • Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California
    • doi: 10.4056/sigs.5029016
    • Hawley, E. R., Piao, H., Scott, N. M., Malfatti, S., Pagani, I., Huntemann, M., et al. (2014). Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California. Stand. Genomic Sci. 9, 635-650. doi: 10.4056/sigs.5029016.
    • (2014) Stand. Genomic Sci. , vol.9 , pp. 635-650
    • Hawley, E.R.1    Piao, H.2    Scott, N.M.3    Malfatti, S.4    Pagani, I.5    Huntemann, M.6
  • 18
    • 77956299931 scopus 로고    scopus 로고
    • Deep-sea oil plume enriches indigenous oil-degrading bacteria
    • doi: 10.1126/science.1195979
    • Hazen, T. C., Dubinsky, E. A., DeSantis, T. Z., Andersen, G. L., Piceno, Y. M., Singh, N., et al. (2010). Deep-sea oil plume enriches indigenous oil-degrading bacteria. Science 330, 204-208. doi: 10.1126/science.1195979.
    • (2010) Science , vol.330 , pp. 204-208
    • Hazen, T.C.1    Dubinsky, E.A.2    DeSantis, T.Z.3    Andersen, G.L.4    Piceno, Y.M.5    Singh, N.6
  • 19
    • 33645994824 scopus 로고    scopus 로고
    • Marine microorganisms make a meal of oil
    • doi: 10.1038/nrmicro1348
    • Head, I. M., Jones, D. M., and Röling, W. F. M. (2006). Marine microorganisms make a meal of oil. Nat. Rev. Microbiol. 4, 173-182. doi: 10.1038/nrmicro1348.
    • (2006) Nat. Rev. Microbiol. , vol.4 , pp. 173-182
    • Head, I.M.1    Jones, D.M.2    Röling, W.F.M.3
  • 20
    • 0000352994 scopus 로고
    • 'Nitrification in estuarine and coastal marine sediments: methods, patterns and regulating factors'
    • eds. T. H. Blackburn and J. Sørensen (Hoboken, NJ: John Wiley and Sons)
    • Henriksen, K., and Kemp, W. M. (1988). "Nitrification in estuarine and coastal marine sediments: methods, patterns and regulating factors," in Nitrogen Cycling in Coastal Marine Environments, eds T. H. Blackburn and J. Sørensen (Hoboken, NJ: John Wiley and Sons), 207-250.
    • (1988) Nitrogen Cycling in Coastal Marine Environments , pp. 207-250
    • Henriksen, K.1    Kemp, W.M.2
  • 21
    • 0032850103 scopus 로고    scopus 로고
    • Nitrogen cycling in coastal marine ecosystems
    • doi: 10.1111/j.1574-6976.1999.tb00414.x
    • Herbert, R. A. (1999). Nitrogen cycling in coastal marine ecosystems. FEMS Microbiol. Rev. 23, 563-590. doi: 10.1111/j.1574-6976.1999.tb00414.x.
    • (1999) FEMS Microbiol. Rev. , vol.23 , pp. 563-590
    • Herbert, R.A.1
  • 22
    • 0033567573 scopus 로고    scopus 로고
    • The world's most spectacular marine hydrocarbon seeps (Coal Oil Point, Santa Barbara Channel, California): quantification of emissions
    • doi: 10.1029/1999JC900148
    • Hornafius, J. S., Quigley, D., and Luyendyk, B. P. (1999). The world's most spectacular marine hydrocarbon seeps (Coal Oil Point, Santa Barbara Channel, California): quantification of emissions. J. Geophys. Res. Oceans 104, 20703-20711. doi: 10.1029/1999JC900148.
    • (1999) J. Geophys. Res. Oceans , vol.104 , pp. 20703-20711
    • Hornafius, J.S.1    Quigley, D.2    Luyendyk, B.P.3
  • 23
    • 84555205238 scopus 로고    scopus 로고
    • Oxygen sensitivity of anammox and coupled N-cycle processes in oxygen minimum zones
    • doi: 10.1371/journal.pone.0029299
    • Kalvelage, T., Jensen, M. M., Contreras, S., Revsbech, N. P., Lam, P., Günter, M., et al. (2011). Oxygen sensitivity of anammox and coupled N-cycle processes in oxygen minimum zones. PLoS ONE 6:e29299. doi: 10.1371/journal.pone.0029299.
    • (2011) PLoS ONE , vol.6
    • Kalvelage, T.1    Jensen, M.M.2    Contreras, S.3    Revsbech, N.P.4    Lam, P.5    Günter, M.6
  • 25
    • 1642464871 scopus 로고    scopus 로고
    • Natural seepage of crude oil into the marine environment
    • doi: 10.1007/s00367-003-0135-0
    • Kvenvolden, K. A., and Cooper, C. K. (2003). Natural seepage of crude oil into the marine environment. Geo-Mar. Lett. 23, 140-146. doi: 10.1007/s00367-003-0135-0.
    • (2003) Geo-Mar. Lett. , vol.23 , pp. 140-146
    • Kvenvolden, K.A.1    Cooper, C.K.2
  • 26
    • 33846185425 scopus 로고    scopus 로고
    • Comparative phylogenetic analysis of microbial communities in pristine and hydrocarbon-contaminated Alpine soils
    • doi: 10.1111/j.1574-6941.2006.00250.x
    • Labbé, D., Margesin, R., Schinner, F., Whyte, L. G., and Greer, C. W. (2007). Comparative phylogenetic analysis of microbial communities in pristine and hydrocarbon-contaminated Alpine soils. FEMS Microbiol. Ecol. 59, 466-475. doi: 10.1111/j.1574-6941.2006.00250.x.
    • (2007) FEMS Microbiol. Ecol. , vol.59 , pp. 466-475
    • Labbé, D.1    Margesin, R.2    Schinner, F.3    Whyte, L.G.4    Greer, C.W.5
  • 27
    • 0010817230 scopus 로고
    • Free-living dinitrogen-fixing bacteria isolated from petroleum refinery oily sludge
    • Laguerre, G., Bossand, B., and Bardin, R. (1987). Free-living dinitrogen-fixing bacteria isolated from petroleum refinery oily sludge. Appl. Environ. Microbiol. 53, 1674-1678.
    • (1987) Appl. Environ. Microbiol. , vol.53 , pp. 1674-1678
    • Laguerre, G.1    Bossand, B.2    Bardin, R.3
  • 28
    • 78650936059 scopus 로고    scopus 로고
    • Microbial nitrogen cycling processes in oxygen minimum zones
    • doi: 10.1146/annurev-marine-120709-142814
    • Lam, P., and Kuypers, M. M. M. (2011). Microbial nitrogen cycling processes in oxygen minimum zones. Annu. Rev. Mar. Sci. 3, 317-345. doi: 10.1146/annurev-marine-120709-142814.
    • (2011) Annu. Rev. Mar. Sci. , vol.3 , pp. 317-345
    • Lam, P.1    Kuypers, M.M.M.2
  • 29
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • doi: 10.1186/gb-2009-10-3-r25
    • Langmead, B., Trapnell, C., Pop, M., and Salzberg, S. L. (2009). Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 10, R25. doi: 10.1186/gb-2009-10-3-r25.
    • (2009) Genome Biol. , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 30
    • 84856432606 scopus 로고    scopus 로고
    • Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset
    • doi: 10.1186/2042-5783-1-4
    • Larsen, P. E., Collart, F. R., Field, D., Meyer, F., Keegan, K. P., Henry, C. S., et al. (2011). Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset. Microb. Inform. Exp. 1, 4. doi: 10.1186/2042-5783-1-4.
    • (2011) Microb. Inform. Exp. , vol.1 , pp. 4
    • Larsen, P.E.1    Collart, F.R.2    Field, D.3    Meyer, F.4    Keegan, K.P.5    Henry, C.S.6
  • 32
    • 84855964551 scopus 로고    scopus 로고
    • Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume
    • doi: 10.1038/ismej.2011.91
    • Lu, Z., Deng, Y., Van Nostrand, J. D., He, Z., Voordeckers, J., Zhou, A., et al. (2012). Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume. ISME J. 6, 451-460. doi: 10.1038/ismej.2011.91.
    • (2012) ISME J. , vol.6 , pp. 451-460
    • Lu, Z.1    Deng, Y.2    Van Nostrand, J.D.3    He, Z.4    Voordeckers, J.5    Zhou, A.6
  • 33
    • 84865318505 scopus 로고    scopus 로고
    • Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
    • doi: 10.1038/ismej.2012.59
    • Mason, O. U., Hazen, T. C., Borglin, S., Chain, P. S. G., Dubinsky, E. A., Fortney, J. L., et al. (2012). Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill. ISME J. 6, 1715-1727. doi: 10.1038/ismej.2012.59.
    • (2012) ISME J. , vol.6 , pp. 1715-1727
    • Mason, O.U.1    Hazen, T.C.2    Borglin, S.3    Chain, P.S.G.4    Dubinsky, E.A.5    Fortney, J.L.6
  • 34
    • 84903393770 scopus 로고    scopus 로고
    • Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill
    • doi: 10.1038/ismej.2013.254. [Epub ahead of print].
    • Mason, O. U., Scott, N. M., Gonzalez, A., Robbins-Pianka, A., Bælum, J., Kimbrel, J., et al. (2014). Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill. ISME J. doi: 10.1038/ismej.2013.254. [Epub ahead of print].
    • (2014) ISME J.
    • Mason, O.U.1    Scott, N.M.2    Gonzalez, A.3    Robbins-Pianka, A.4    Bælum, J.5    Kimbrel, J.6
  • 35
    • 53549118607 scopus 로고    scopus 로고
    • The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes
    • doi: 10.1186/1471-2105-9-386
    • Meyer, F., Paarmann, D., D'Souza, M., Olson, R., Glass, E. M., Kubal, M., et al. (2008). The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics 9:386. doi: 10.1186/1471-2105-9-386.
    • (2008) BMC Bioinformatics , vol.9 , pp. 386
    • Meyer, F.1    Paarmann, D.2    D'Souza, M.3    Olson, R.4    Glass, E.M.5    Kubal, M.6
  • 36
    • 33748323077 scopus 로고    scopus 로고
    • Study of nitrogen fixation in microbial communities of oil-contaminated marine sediment microcosms
    • doi: 10.1111/j.1462-2920.2006.01069.x
    • Musat, F., Harder, J., and Widdel, F. (2006). Study of nitrogen fixation in microbial communities of oil-contaminated marine sediment microcosms. Environ. Microbiol. 8, 1834-1843. doi: 10.1111/j.1462-2920.2006.01069.x.
    • (2006) Environ. Microbiol. , vol.8 , pp. 1834-1843
    • Musat, F.1    Harder, J.2    Widdel, F.3
  • 38
    • 53949099812 scopus 로고    scopus 로고
    • Structure of bacterial communities along a hydrocarbon contamination gradient in a coastal sediment
    • doi: 10.1111/j.1574-6941.2008.00589.x
    • Paissé, S., Coulon, F., Goñi-Urriza, M., Peperzak, L., McGenity, T. J., and Duran, R. (2008). Structure of bacterial communities along a hydrocarbon contamination gradient in a coastal sediment. FEMS Microbiol. Ecol. 66, 295-305. doi: 10.1111/j.1574-6941.2008.00589.x.
    • (2008) FEMS Microbiol. Ecol. , vol.66 , pp. 295-305
    • Paissé, S.1    Coulon, F.2    Goñi-Urriza, M.3    Peperzak, L.4    McGenity, T.J.5    Duran, R.6
  • 39
    • 84870950139 scopus 로고    scopus 로고
    • Composition and fate of gas and oil released to the water column during the Deepwater Horizon oil spill
    • doi: 10.1073/pnas.1101242108.
    • Reddy, C. M., Arey, J. S., Seewald, J. S., Sylva, S. P., Lemkau, K. L., Nelson, R. K., et al. (2011). Composition and fate of gas and oil released to the water column during the Deepwater Horizon oil spill. Proc. Natl. Acad. Sci. U.S.A. 20229-20234. doi: 10.1073/pnas.1101242108.
    • (2011) Proc. Natl. Acad. Sci. U.S.A. , pp. 20229-20234
    • Reddy, C.M.1    Arey, J.S.2    Seewald, J.S.3    Sylva, S.P.4    Lemkau, K.L.5    Nelson, R.K.6
  • 40
    • 1242321336 scopus 로고    scopus 로고
    • The chemistry of nitrosative stress induced by nitric oxide and reactive nitrogen oxide species. Putting perspective on stressful biological situations
    • doi: 10.1515/BC.2004.001
    • Ridnour, L. A., Thomas, D. D., Mancardi, D., Espey, M. G., Miranda, K. M., Paolocci, N., et al. (2004). The chemistry of nitrosative stress induced by nitric oxide and reactive nitrogen oxide species. Putting perspective on stressful biological situations. Biol. Chem. 385, 1-10. doi: 10.1515/BC.2004.001.
    • (2004) Biol. Chem. , vol.385 , pp. 1-10
    • Ridnour, L.A.1    Thomas, D.D.2    Mancardi, D.3    Espey, M.G.4    Miranda, K.M.5    Paolocci, N.6
  • 42
    • 2442643152 scopus 로고    scopus 로고
    • Bacterial community dynamics and hydrocarbon degradation during a field-scale evaluation of bioremediation on a mudflat beach contaminated with buried oil
    • doi: 10.1128/AEM.70.5.2603-2613.2004
    • Röling, W. F. M., Milner, M. G., Jones, D. M., Fratepietro, F., Swannell, R. P. J., Daniel, F., et al. (2004). Bacterial community dynamics and hydrocarbon degradation during a field-scale evaluation of bioremediation on a mudflat beach contaminated with buried oil. Appl. Environ. Microbiol. 70, 2603-2613. doi: 10.1128/AEM.70.5.2603-2613.2004.
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 2603-2613
    • Röling, W.F.M.1    Milner, M.G.2    Jones, D.M.3    Fratepietro, F.4    Swannell, R.P.J.5    Daniel, F.6
  • 43
    • 0036840898 scopus 로고    scopus 로고
    • Robust hydrocarbon degradation and dynamics of bacterial communities during nutrient-enhanced oil spill bioremediation
    • doi: 10.1128/AEM.68.11.5537-5548.2002
    • Röling, W. F. M., Milner, M. G., Jones, D. M., Lee, K., Daniel, F., Swannell, R. J. P., et al. (2002). Robust hydrocarbon degradation and dynamics of bacterial communities during nutrient-enhanced oil spill bioremediation. Appl. Environ. Microbiol. 68, 5537-5548. doi: 10.1128/AEM.68.11.5537-5548.2002.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 5537-5548
    • Röling, W.F.M.1    Milner, M.G.2    Jones, D.M.3    Lee, K.4    Daniel, F.5    Swannell, R.J.P.6
  • 44
    • 84875769694 scopus 로고    scopus 로고
    • Relating phylogenetic and functional diversity among denitrifiers and quantifying their capacity to predict community functioning
    • doi: 10.3389/fmicb.2012.00209
    • Salles, J. F., Le Roux, X., and Poly, F. (2012). Relating phylogenetic and functional diversity among denitrifiers and quantifying their capacity to predict community functioning. Front. Microbiol. 3:209. doi: 10.3389/fmicb.2012.00209.
    • (2012) Front. Microbiol. , vol.3 , pp. 209
    • Salles, J.F.1    Le Roux, X.2    Poly, F.3
  • 45
    • 0003946894 scopus 로고
    • Petroleum nitrogen compounds and oxygen compounds
    • doi: 10.1021/ar50033a002
    • Snyder, L. R. (1970). Petroleum nitrogen compounds and oxygen compounds. Acc. Chem. Res. 3, 290-299. doi: 10.1021/ar50033a002.
    • (1970) Acc. Chem. Res. , vol.3 , pp. 290-299
    • Snyder, L.R.1
  • 46
    • 77949277052 scopus 로고    scopus 로고
    • Microbial community response to a simulated hydrocarbon spill in mangrove sediments
    • doi: 10.1007/s12275-009-0147-1
    • Taketani, R. G., Franco, N. O., Rosado, A. S., and van Elsas, J. D. (2010). Microbial community response to a simulated hydrocarbon spill in mangrove sediments. J. Microbiol. 48, 7-15. doi: 10.1007/s12275-009-0147-1.
    • (2010) J. Microbiol. , vol.48 , pp. 7-15
    • Taketani, R.G.1    Franco, N.O.2    Rosado, A.S.3    van Elsas, J.D.4
  • 47
    • 0036197004 scopus 로고    scopus 로고
    • Production of N(2) through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments
    • doi: 10.1128/AEM.68.3.1312-1318.2002
    • Thamdrup, B., and Dalsgaard, T. (2002). Production of N(2) through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments. Appl. Environ. Microbiol. 68, 1312-1318. doi: 10.1128/AEM.68.3.1312-1318.2002.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 1312-1318
    • Thamdrup, B.1    Dalsgaard, T.2
  • 48
    • 84888215440 scopus 로고    scopus 로고
    • Stark contrast in denitrification and anammox across the deep Norwegian trench in the Skagerrak
    • doi: 10.1128/AEM.01970-13
    • Trimmer, M., Engström, P., and Thamdrup, B. (2013). Stark contrast in denitrification and anammox across the deep Norwegian trench in the Skagerrak. Appl. Environ. Microbiol. 79, 7381-7389. doi: 10.1128/AEM.01970-13.
    • (2013) Appl. Environ. Microbiol. , vol.79 , pp. 7381-7389
    • Trimmer, M.1    Engström, P.2    Thamdrup, B.3
  • 49
    • 77952250684 scopus 로고    scopus 로고
    • Subsurface cycling of nitrogen and anaerobic aromatic hydrocarbon biodegradation revealed by nucleic acid and metabolic biomarkers
    • doi: 10.1128/AEM.00172-10
    • Yagi, J. M., Suflita, J. M., Gieg, L. M., DeRito, C. M., Jeon, C.-O., and Madsen, E. L. (2010). Subsurface cycling of nitrogen and anaerobic aromatic hydrocarbon biodegradation revealed by nucleic acid and metabolic biomarkers. Appl. Environ. Microbiol. 76, 3124-3134. doi: 10.1128/AEM.00172-10.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 3124-3134
    • Yagi, J.M.1    Suflita, J.M.2    Gieg, L.M.3    DeRito, C.M.4    Jeon, C.-O.5    Madsen, E.L.6
  • 50
    • 77950628104 scopus 로고    scopus 로고
    • Potential roles of anaerobic ammonium and methane oxidation in the nitrogen cycle of wetland ecosystems
    • doi: 10.1007/s00253-010-2451-4
    • Zhu, G., Jetten, M. S. M., Kuschk, P., Ettwig, K. F., and Yin, C. (2010). Potential roles of anaerobic ammonium and methane oxidation in the nitrogen cycle of wetland ecosystems. Appl. Microbiol. Biotechnol. 86, 1043-1055. doi: 10.1007/s00253-010-2451-4.
    • (2010) Appl. Microbiol. Biotechnol. , vol.86 , pp. 1043-1055
    • Zhu, G.1    Jetten, M.S.M.2    Kuschk, P.3    Ettwig, K.F.4    Yin, C.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.