Anaerobic ammonium oxidation by nitrite (anammox): Implications for N2 production in coastal marine sediments

Geochimica et Cosmochimica Acta

Volumn 69, Issue 8, 2005, Pages 2057-2065

  Engström, Pia ^a   Dalsgaard, Tage ^b   Hulth, Stefan ^a   Aller, Robert C ^c  

^a UNIVERSITY OF GOTHENBURG   (Sweden)

^b NATIONAL ENVIRONMENTAL RESEARCH INSTITUTE   (Denmark)

^c STONY BROOK UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMMONIUM; COASTAL SEDIMENT; DENITRIFICATION; NITRITE; REDUCTION; SEDIMENT CHEMISTRY;

EID: 17444397420     PISSN: 00167037     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gca.2004.09.032     Document Type: Article

References (54)

1. R.C. Aller The sedimentary Mn cycle in Long Island Sound-Its role as intermediate oxidant and the influence of bioturbation, O2 and C(org) flux on diagenetic reaction balances J. Mar. Res. 52 1994 259-295
2. R.C. Aller P.D. Rude Complete oxidation of solid-phase sulfides by manganese and bacteria in anoxic marine-sediments Geochim. Cosmochim. Acta 52 3 1988 751-765
3. R.C. Aller P.O.J. Hall P.D. Rude J.Y. Aller Biogeochemical heterogeneity and suboxic diagenesis in hemipelagic sediments of the Panama Basin. Deep-Sea Res. Part I: Oceanogr Res. Papers 45 1 1998 133-165
4. P. Anschutz B. Sundby L. Lefrancois G.W. Luther A. Mucci Interactions between metal oxides and species of nitrogen and iodine in bioturbated marine sediments Geochim. Cosmochim. Acta 64 16 2000 2751-2763
5. J. Aure E. Dahl Oxygen, nutrients, carbon and water exchange in the Skagerrak Basin Continent. Shelf Res. 14 9 1994 965-977
6. M.L. Bender R. Jahnke R. Weiss W. Martin D.T. Heggie J. Orchardo T. Sowers Organic carbon oxidation and benthic nitrogen and silica dynamics in San Clemente Basin, a continental borderline site Geochim. Cosmochim. Acta 53 1989 685-697
7. T.H. Blackburn K. Henriksen Nitrogen cycling in different types of sediments from Danish waters Limnol. Oceanogr. 28 1983 477-493
8. J.A. Brandes A.H. Devol A global marine-fixed nitrogen isotopic budget Implications for Holocene nitrogen cycling Global Biogeochem. Cycles 16 4 2002 1120
9. E. Broda Two kinds of lithotrophs missing in nature Z. Allg. Microbiol. 17 1977 491-493
10. D.E. Canfield B.B. Jorgensen H. Fossing R. Glud J. Gundersen N.B. Ramsing B. Thamdrup J.W. Hansen L.P. Nielsen P.O.J. Hall Pathways of organic carbon oxidation in three continental margin sediments Mar. Geol. 113 1993 27-40
11. D.G. Capone J.P. Zehr H.W. Paerl B. Bergman E.J. Carpenter Trichodesmium, a globally significant marine cyanobacterium Science 276 5316 1997 1221-1229
12. E.J. Carpenter Nitrogen in the Marine Environment 1983 Academic Press New York
13. E.J. Carpenter K. Romans Major role of the cyanobacterium trichodesmium in nutrient cycling in the North-Atlantic Ocean Science 254 5036 1991 1356-1358
14. R. Chester M.J. Hughes A chemical technique for the separation ferro-manganese minerals, carbobate minerals and adsorbed trace elements from pelagic sediments Chem. Geol. 2 1967 249-262
15. L.A. Codispoti J.A. Brandes J.P. Christensen A.H. Devol S.W.A. Naqvi H.W. Paerl T. Yoshinari The oceanic fixed nitrogen and nitrous oxide budgets Moving targets as we enter the anthropocene? Sci. Mar. 65 2001 85-105
16. T. Dalsgaard B. Thamdrup Factors controlling anaerobic ammonium oxidation with nitrite in marine sediments Appl. Environ. Microbiol. 68 8 2002 3802-3808
17. T. Dalsgaard D.E. Canfield J. Petersen B. Thamdrup J. Acuna-Gonzalez N2 production by the anammox reaction in the anoxic water column of Golfo Dulce, Costa Rica Nature 422 2003 606-608
18. A.H. Devol Nitrogen cycle Solution to a marine mystery Nature 422 2003 575-576
19. S.P. Dhakar D.J. Burdige Coupled, non-linear, steady state model for early diagenetic processes in pelagic sediments Am. J. Sci. 296 3 1996 296-330
20. A. Fanning Nutrient provinces in the sea Concentration ratios, reaction rate ratios and ideal covariation J. Geophys. Res. 94 1992 5693-5712
21. M. Gerino R.C. Aller C. Lee J.K. Cochran J.Y. Aller M.A. Green D. Hirschberg Comparison of different tracers and methods used to quantify bioturbation during a spring bloom 234-thorium, luminophores and chlorophyll a Estuar. Coast. Shelf Sci. 46 4 1998 531-547
22. F. Gilbert R.C. Aller S. Hulth The influence of biogenic irrigation intensity on benthic nitrification and denitrification; an experimental and model approach J. Mar. Sys. 61 2003 101-125
23. F. Goloway M.L. Bender Diagnenetic models of interstitial nitrate profiles in deep sea suboxic sediments Limnol. Oceanogr. 27 1982 624-638
24. N. Gruber J.L. Sarmiento Global patterns of marine nitrogen fixation and denitrification Global Biogeochem. Cycles 11 2 1997 235-266
25. J.W. Hansen B. Thamdrup B.B. Jorgensen Anoxic incubation of sediment in gas-tight plastic bags A method for biogeochemical process studies Mar. Ecol. Progr. Ser. 208 2000 273-282
26. I. Hansson A new set of pH scales and standard buffers for sea water Deep-Sea Res. 20 1973 479-491
27. C. Haraldsson L.G. Anderson M. Hassellöv S. Hulth K. Olsson Rapid, high-precision potentiometric titration of alkalinity in ocean and sediment pore waters Deep-Sea Res. 44 1997 2031-2044
28. R.E. Hecky P. Kilham Nutrient limitation of phytoplankton in freshwater and marine environments A review of recent evidence on the effects of enrichment Limnol. Oceanogr. 33 1988 796-822
29. R.A. Herbert Nitrogen cycling in coastal marine ecosystems FEMS Microbiol. Rev. 23 5 1999 563-590
30. S. Hulth R.C. Aller F. Gilbert Coupled anoxic nitrification manganese reduction in marine sediments Geochim. Cosmochim. Acta 63 1 1999 49-66
31. M.S.M. Jetten M. Wagner J. Fuerst M. Van Loosdrecht G. Kuenen M. Strous Microbiology and application of the anaerobic ammonium oxidation ('anammox') process Curr. Opin. Biotechnol. 12 3 2001 283-288
32. D.M. Karl A sea of change Biogeochemical variability in the North Pacific Subtropical Gyre Ecosystems 2 3 1999 181-214
33. M.M.M. Kuypers O.A. Sliekers G. Lavik M. Schmid B.B. Jorgensen G.J. Kuenen J.S. Sinninghe Damste M. Strous M.S.M. Jetten Anaerobic ammonium oxidation by anammox bacteria in the Black Sea Nature 422 2003 608-611
34. E. Lewis D.W.R. Wallace Program Development for CO2 System Calculations 1998 Carbon Dioxide Information Analysis Center, Oak Ridge National Laboratory, U.S. Department of Energy Oak Ridge, Tennessee ORNL/CDIAC-105
35. G.W. Luther B. Sunby R.L. Lewis P.J. Brendel N. Silverberg Interactions of manganese with the nitrogen cycle Alternative pathways to dinitrogen Geochim. Cosmochim. Acta 61 1997 4043-4052
36. C.S. Martens R.A. Berner Methane production in the interstitial waters of sulphate-depleted marine sediments Science 185 1974 1167-1169
37. J.J. Middelburg K. Soetart P.M. Herman C.H.R. Heip Denitrification in marine sediments A model study Global Biogeochem. Cycles 10 1996 661-673
38. A. Mulder A.A. Vandegraaf L.A. Robertson J.G. Kuenen Anaerobic ammonium oxidation discovered in a denitrifying fluidized-bed reactor FEMS Microbiol. Ecol. 16 3 1995 177-183
39. J.W. Murray L.A. Codispoti G.E. Friederich Redox environments The suboxic zone in the Black Sea In: C.P. Huang C. O'Melia J.J. Morgans (Eds.) Aquatic Chemistry Interfacial and Interspecies Processes 1995 American Chemical Society 157-176
40. F.A. Richards Chemical observations in some anoxic, sulfide-bearing basins and fjords 1965 In Proceedings of the Second International Water Pollution Research Conference
41. N. Risgaard-Petersen L.P. Nielsen S. Rysgaard T. Dalsgaard R.L. Meyer Application of the isotope pairing technique in sediments where anammox and denitrification co-exist Limnol. Oceanogr. Meth. 1 2003 63-73
42. R. Rosenberg Benthic marine fauna structured by hydrodynamic processes and food availability Neth. J. Sea Res. 34 1995 303-317
43. J.H. Ryther W.M. Dunstan Nitrogen, phosphorous and eutrophication in the coastal marine environment Science 171 1971 1008-1013
44. H.D. Schulz A. Dahmke U. Schinzel K. Wallmann M. Zabel Early diagenetic processes, fluxes and reaction-rates in sediments of the South-Atlantic Geochim. Cosmochim. Acta 58 9 1994 2041-2060
45. S.P. Seitzinger Denitrification in freshwater and coastal marine ecosystems Ecological and geochemical significance Limnol. Oceanogr. 33 1988 702-724
46. S.P. Seitzinger A.E. Giblin Estimating denitrification in North Atlantic continental shelf sediments Biogeochemistry 35 1 1996 235-260
47. T.J. Shaw J.M. Gieskes R.A. Jahnke Early diagenesis in differing depositional-environments-The response of transition-metals in pore water Geochim. Cosmochim. Acta 54 5 1990 1233-1246
48. K. Soetaert P.M.J. Herman J.J. Middelburg Dynamic response of deep-sea sediments to seasonal variations A model Limnol. Oceanogr. 41 8 1996 1651-1668
49. J.D.H. Strickland T.R. Parsons A practical handbook of sea water analysis Bull. Fish Res. Board Can. 169 1972 1-311
50. A. Svansson Hydrography of the Gullmar Fjord. Report In Göteborg Series No. 23 1984 Institute of Hydrological Research
51. B. Thamdrup T. Dalsgaard The fate of ammonium in anoxic manganese oxide-rich marine sediment Geochim. Cosmochim. Acta 64 24 2000 4157-4164
52. B. Thamdrup T. Dalsgaard Production of N2 through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments Appl. Environ. Microbiol. 68 3 2002 1312-1318
53. M. Trimmer J.C. Nicholls B. Deflandre Anaerobic ammonium oxidation measured in sediments along the Thames estuary, United Kingdom Appl. Environ. Microbiol. 69 11 2003 6447-6454
54. J.P. Zehr B.B. Ward Nitrogen cycling in the ocean New perspectives on processes and paradigms Appl. Environ. Microbiol. 68 3 2002 1015-1024