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Volumn 63, Issue PART 4, 2014, Pages 528-539

A novel high-throughput method for molecular serotyping and serotype-specific quantification of streptococcus pneumoniae using a nanofluidic real-time PCR system

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; POLYSACCHARIDE VACCINE;

EID: 84897896061     PISSN: 00222615     EISSN: None     Source Type: Journal    
DOI: 10.1099/jmm.0.071464-0     Document Type: Article
Times cited : (37)

References (43)
  • 1
    • 77955134349 scopus 로고    scopus 로고
    • Usefulness of real-time PCR for lytA, ply, and Spn9802 on plasma samples for the diagnosis of pneumococcal pneumonia
    • Abdeldaim, G., Herrmann, B., Mölling, P., Holmberg, H., Blomberg, J., Olcén, P. & Strålin, K. (2010). Usefulness of real-time PCR for lytA, ply, and Spn9802 on plasma samples for the diagnosis of pneumococcal pneumonia. Clin Microbiol Infect 16, 1135-1141
    • (2010) Clin Microbiol Infect , vol.16 , pp. 1135-1141
    • Abdeldaim, G.1    Herrmann, B.2    Mölling, P.3    Holmberg, H.4    Blomberg, J.5    Olcén, P.6    Strålin, K.7
  • 3
    • 61449259801 scopus 로고    scopus 로고
    • Evaluation of sequential multiplex PCR for direct detection of multiple serotypes of Streptococcus pneumoniae from nasopharyngeal secretions
    • Antonio, M., Hakeem, I., Sankareh, K., Cheung, Y. B. & Adegbola, R. A. (2009). Evaluation of sequential multiplex PCR for direct detection of multiple serotypes of Streptococcus pneumoniae from nasopharyngeal secretions. J Med Microbiol 58, 296-302
    • (2009) J Med Microbiol , vol.58 , pp. 296-302
    • Antonio, M.1    Hakeem, I.2    Sankareh, K.3    Cheung, Y.B.4    Adegbola, R.A.5
  • 4
    • 53349083779 scopus 로고    scopus 로고
    • Molecular detection methods and serotyping performed directly on clinical samples improve diagnostic sensitivity and reveal increased incidence of invasive disease by Streptococcus pneumoniae in Italian children
    • Azzari, C., Moriondo, M., Indolfi, G., Massai, C., Becciolini, L., de Martino, M. & Resti, M. (2008). Molecular detection methods and serotyping performed directly on clinical samples improve diagnostic sensitivity and reveal increased incidence of invasive disease by Streptococcus pneumoniae in Italian children. J Med Microbiol 57, 1205-1212
    • (2008) J Med Microbiol , vol.57 , pp. 1205-1212
    • Azzari, C.1    Moriondo, M.2    Indolfi, G.3    Massai, C.4    Becciolini, L.5    de Martino, M.6    Resti, M.7
  • 5
    • 77949511183 scopus 로고    scopus 로고
    • Realtime PCR is more sensitive than multiplex PCR for diagnosis and serotyping in children with culture negative pneumococcal invasive disease
    • Azzari, C., Moriondo, M., Indolfi, G., Cortimiglia, M., Canessa, C., Becciolini, L., Lippi, F., de Martino, M. & Resti, M. (2010). Realtime PCR is more sensitive than multiplex PCR for diagnosis and serotyping in children with culture negative pneumococcal invasive disease. PLoS ONE 5, e9282
    • (2010) PLoS ONE , vol.5
    • Azzari, C.1    Moriondo, M.2    Indolfi, G.3    Cortimiglia, M.4    Canessa, C.5    Becciolini, L.6    Lippi, F.7    de Martino, M.8    Resti, M.9
  • 7
    • 0037505612 scopus 로고    scopus 로고
    • Serotyping Streptococcus pneumoniae by multiplex PCR
    • Brito, D. A., Ramirez, M. & de Lencastre, H. (2003). Serotyping Streptococcus pneumoniae by multiplex PCR. J Clin Microbiol 41, 2378-2384
    • (2003) J Clin Microbiol , vol.41 , pp. 2378-2384
    • Brito, D.A.1    Ramirez, M.2    de Lencastre, H.3
  • 8
    • 4644283256 scopus 로고    scopus 로고
    • Immunoblot method to detect Streptococcus pneumoniae and identify multiple serotypes from nasopharyngeal secretions
    • Bronsdon, M. A., O'Brien, K. L., Facklam, R. R., Whitney, C. G., Schwartz, B. & Carlone, G. M. (2004). Immunoblot method to detect Streptococcus pneumoniae and identify multiple serotypes from nasopharyngeal secretions. J Clin Microbiol 42, 1596-1600.
    • (2004) J Clin Microbiol , vol.42 , pp. 1596-1600
    • Bronsdon, M.A.1    O'Brien, K.L.2    Facklam, R.R.3    Whitney, C.G.4    Schwartz, B.5    Carlone, G.M.6
  • 12
    • 0037234766 scopus 로고    scopus 로고
    • Meningitis due to mixed infection with penicillin-resistant and penicillinsusceptible strains of Streptococcus pneumoniae
    • Chaves, F., Campelo, C., Sanz, F. & Otero, J. R. (2003). Meningitis due to mixed infection with penicillin-resistant and penicillinsusceptible strains of Streptococcus pneumoniae. J Clin Microbiol 41, 512-513.
    • (2003) J Clin Microbiol , vol.41 , pp. 512-513
    • Chaves, F.1    Campelo, C.2    Sanz, F.3    Otero, J.R.4
  • 13
    • 0035059541 scopus 로고    scopus 로고
    • Simultaneous detection of Neisseria meningitidis, Haemophilus influenzae, and Streptococcus pneumoniae in suspected cases of meningitis and septicemia using real-time PCR
    • Corless, C. E., Guiver, M., Borrow, R., Edwards-Jones, V., Fox, A. J. & Kaczmarski, E. B. (2001). Simultaneous detection of Neisseria meningitidis, Haemophilus influenzae, and Streptococcus pneumoniae in suspected cases of meningitis and septicemia using real-time PCR. J Clin Microbiol 39, 1553-1558.
    • (2001) J Clin Microbiol , vol.39 , pp. 1553-1558
    • Corless, C.E.1    Guiver, M.2    Borrow, R.3    Edwards-Jones, V.4    Fox, A.J.5    Kaczmarski, E.B.6
  • 15
    • 34748903452 scopus 로고    scopus 로고
    • Sequential multiplex PCR for determining capsular serotypes of pneumococci recovered from Brazilian children
    • Dias, C. A., Teixeira, L. M., Carvalho, M. G. & Beall, B. (2007). Sequential multiplex PCR for determining capsular serotypes of pneumococci recovered from Brazilian children. J Med Microbiol 56, 1185-1188.
    • (2007) J Med Microbiol , vol.56 , pp. 1185-1188
    • Dias, C.A.1    Teixeira, L.M.2    Carvalho, M.G.3    Beall, B.4
  • 16
    • 84858122921 scopus 로고    scopus 로고
    • Accuracy of using the lytA gene to distinguish Streptococcus pneumoniae from related species
    • Greve, T. & Møller, J. K. (2012). Accuracy of using the lytA gene to distinguish Streptococcus pneumoniae from related species. J Med Microbiol 61, 478-482.
    • (2012) J Med Microbiol , vol.61 , pp. 478-482
    • Greve, T.1    Møller, J.K.2
  • 18
    • 78149387943 scopus 로고    scopus 로고
    • Systematic evaluation of serotypes causing invasive pneumococcal disease among children under five: The Pneumococcal Global Serotype Project
    • Johnson, H. L., Deloria-Knoll, M., Levine, O. S., Stoszek, S. K., Freimanis Hance, L., Reithinger, R., Muenz, L. R. & O'Brien, K. L. (2010). Systematic evaluation of serotypes causing invasive pneumococcal disease among children under five: the Pneumococcal Global Serotype Project. PLoS Med 7, e1000348.
    • (2010) PLoS Med , vol.7
    • Johnson, H.L.1    Deloria-Knoll, M.2    Levine, O.S.3    Stoszek, S.K.4    Hance, F.L.5    Reithinger, R.6    Muenz, L.R.7    O'Brien, K.L.8
  • 19
    • 55149092744 scopus 로고    scopus 로고
    • An easy method for detection of nasopharyngeal carriage of multiple Streptococcus pneumoniae serotypes
    • Kaltoft, M. S., Skov Sørensen, U. B., Slotved, H. C. & Konradsen, H. B. (2008). An easy method for detection of nasopharyngeal carriage of multiple Streptococcus pneumoniae serotypes. J Microbiol Methods 75, 540-544.
    • (2008) J Microbiol Methods , vol.75 , pp. 540-544
    • Kaltoft, M.S.1    Sørensen, S.U.B.2    Slotved, H.C.3    Konradsen, H.B.4
  • 20
    • 74949139568 scopus 로고    scopus 로고
    • Specificity of a quantitative real-time polymerase chain reaction assay for the detection of invasive pneumococcal disease: Identifying Streptococcus pneumoniae using quantitative polymerase chain reaction
    • Kee, C., Fatovich, D. M., Palladino, S., Kay, I. D., Pryce, T. M., Flexman, J., Murray, R. & Waterer, G. W. (2010). Specificity of a quantitative real-time polymerase chain reaction assay for the detection of invasive pneumococcal disease: identifying Streptococcus pneumoniae using quantitative polymerase chain reaction. Chest 137, 243-244.
    • (2010) Chest , vol.137 , pp. 243-244
    • Kee, C.1    Fatovich, D.M.2    Palladino, S.3    Kay, I.D.4    Pryce, T.M.5    Flexman, J.6    Murray, R.7    Waterer, G.W.8
  • 21
    • 33646569090 scopus 로고    scopus 로고
    • Multiplex PCR-based reverse line blot hybridization assay to identify 23 Streptococcus pneumoniae polysaccharide vaccine serotypes
    • Kong, F., Brown, M., Sabananthan, A., Zeng, X. & Gilbert, G. L. (2006). Multiplex PCR-based reverse line blot hybridization assay to identify 23 Streptococcus pneumoniae polysaccharide vaccine serotypes. J Clin Microbiol 44, 1887-1891.
    • (2006) J Clin Microbiol , vol.44 , pp. 1887-1891
    • Kong, F.1    Brown, M.2    Sabananthan, A.3    Zeng, X.4    Gilbert, G.L.5
  • 22
    • 0037312002 scopus 로고    scopus 로고
    • Evaluation of semiautomated multiplex PCR assay for determination of Streptococcus pneumoniae serotypes and serogroups
    • Lawrence, E. R., Griffiths, D. B., Martin, S. A., George, R. C. & Hall, L. M. C. (2003). Evaluation of semiautomated multiplex PCR assay for determination of Streptococcus pneumoniae serotypes and serogroups. J Clin Microbiol 41, 601-607.
    • (2003) J Clin Microbiol , vol.41 , pp. 601-607
    • Lawrence, E.R.1    Griffiths, D.B.2    Martin, S.A.3    George, R.C.4    Hall, L.M.C.5
  • 24
    • 77957045982 scopus 로고    scopus 로고
    • Enhanced determination of Streptococcus pneumoniae serotypes associated with invasive disease in Laos by using a real-time polymerase chain reaction serotyping assay with cerebrospinal fluid
    • Moore, C. E., Sengduangphachanh, A., Thaojaikong, T., Sirisouk, J., Foster, D., Phetsouvanh, R., McGee, L., Crook, D. W., Newton, P. N. & Peacock, S. J. (2010). Enhanced determination of Streptococcus pneumoniae serotypes associated with invasive disease in Laos by using a real-time polymerase chain reaction serotyping assay with cerebrospinal fluid. Am J Trop Med Hyg 83, 451-457.
    • (2010) Am J Trop Med Hyg , vol.83 , pp. 451-457
    • Moore, C.E.1    Sengduangphachanh, A.2    Thaojaikong, T.3    Sirisouk, J.4    Foster, D.5    Phetsouvanh, R.6    McGee, L.7    Crook, D.W.8    Newton, P.N.9    Peacock, S.J.10
  • 27
    • 30744476257 scopus 로고    scopus 로고
    • Sequential multiplex PCR approach for determining capsular serotypes of Streptococcus pneumoniae isolates
    • Pai, R., Gertz, R. E. & Beall, B. (2006). Sequential multiplex PCR approach for determining capsular serotypes of Streptococcus pneumoniae isolates. J Clin Microbiol 44, 124-131.
    • (2006) J Clin Microbiol , vol.44 , pp. 124-131
    • Pai, R.1    Gertz, R.E.2    Beall, B.3
  • 29
    • 69249158125 scopus 로고    scopus 로고
    • Severity of pneumococcal pneumonia associated with genomic bacterial load
    • DNA-Neumococo Study Group
    • Rello, J., Lisboa, T., Lujan, M., Gallego, M., Kee, C., Kay, I., Lopez, D., Waterer, G. W. &DNA-Neumococo Study Group (2009). Severity of pneumococcal pneumonia associated with genomic bacterial load. Chest 136, 832-840.
    • (2009) Chest , vol.136 , pp. 832-840
    • Rello, J.1    Lisboa, T.2    Lujan, M.3    Gallego, M.4    Kee, C.5    Kay, I.6    Lopez, D.7    Waterer, G.W.8
  • 30
    • 67650646463 scopus 로고    scopus 로고
    • Multiplex PCR reveals a high rate of nasopharyngeal pneumococcal 7-valent conjugate vaccine serotypes co-colonizing indigenous Warao children in Venezuela
    • Rivera-Olivero, I. A., Blommaart, M., Bogaert, D., Hermans, P. W. & de Waard, J. H. (2009). Multiplex PCR reveals a high rate of nasopharyngeal pneumococcal 7-valent conjugate vaccine serotypes co-colonizing indigenous Warao children in Venezuela. J Med Microbiol 58, 584-587.
    • (2009) J Med Microbiol , vol.58 , pp. 584-587
    • Rivera-Olivero, I.A.1    Blommaart, M.2    Bogaert, D.3    Hermans, P.W.4    de Waard, J.H.5
  • 31
    • 56349156731 scopus 로고    scopus 로고
    • Identification of serotype in culture negative pneumococcal meningitis using sequential multiplex PCR: Implication for surveillance and vaccine design
    • Saha, S. K., Darmstadt, G. L., Baqui, A. H., Hossain, B., Islam, M., Foster, D., Al-Emran, H., Naheed, A., Arifeen, S. E. & other authors (2008). Identification of serotype in culture negative pneumococcal meningitis using sequential multiplex PCR: implication for surveillance and vaccine design. PLoS ONE 3, e3576.
    • (2008) PLoS ONE , vol.3
    • Saha, S.K.1    Darmstadt, G.L.2    Baqui, A.H.3    Hossain, B.4    Islam, M.5    Foster, D.6    Al-Emran, H.7    Naheed, A.8    Arifeen, S.E.9
  • 32
    • 45849087630 scopus 로고    scopus 로고
    • High throughput gene expression measurement with real time PCR in a microfluidic dynamic array
    • Spurgeon, S. L., Jones, R. C. & Ramakrishnan, R. (2008). High throughput gene expression measurement with real time PCR in a microfluidic dynamic array. PLoS ONE 3, e1662.
    • (2008) PLoS ONE , vol.3
    • Spurgeon, S.L.1    Jones, R.C.2    Ramakrishnan, R.3
  • 33
    • 24744456122 scopus 로고    scopus 로고
    • Discrimination of Streptococcus pneumoniae from viridans group streptococci by genomic subtractive hybridization
    • Suzuki, N., Seki, M., Nakano, Y., Kiyoura, Y., Maeno, M. & Yamashita, Y. (2005). Discrimination of Streptococcus pneumoniae from viridans group streptococci by genomic subtractive hybridization. J Clin Microbiol 43, 4528-4534.
    • (2005) J Clin Microbiol , vol.43 , pp. 4528-4534
    • Suzuki, N.1    Seki, M.2    Nakano, Y.3    Kiyoura, Y.4    Maeno, M.5    Yamashita, Y.6
  • 34
    • 79955507600 scopus 로고    scopus 로고
    • Improved detection of nasopharyngeal cocolonization by multiple pneumococcal serotypes by use of latex agglutination or molecular serotyping by microarray
    • Turner, P., Hinds, J., Turner, C., Jankhot, A., Gould, K., Bentley, S. D., Nosten, F. & Goldblatt, D. (2011). Improved detection of nasopharyngeal cocolonization by multiple pneumococcal serotypes by use of latex agglutination or molecular serotyping by microarray. J Clin Microbiol 49, 1784-1789.
    • (2011) J Clin Microbiol , vol.49 , pp. 1784-1789
    • Turner, P.1    Hinds, J.2    Turner, C.3    Jankhot, A.4    Gould, K.5    Bentley, S.D.6    Nosten, F.7    Goldblatt, D.8
  • 36
    • 78650789393 scopus 로고    scopus 로고
    • Association between nasopharyngeal load of Streptococcus pneumoniae, viral coinfection, and radiologically confirmed pneumonia in Vietnamese children
    • Vu, H. T., Yoshida, L. M., Suzuki, M., Nguyen, H. A., Nguyen, C. D., Nguyen, A. T., Oishi, K., Yamamoto, T., Watanabe, K. & other authors (2011). Association between nasopharyngeal load of Streptococcus pneumoniae, viral coinfection, and radiologically confirmed pneumonia in Vietnamese children. Pediatr Infect Dis J 30, 11-18.
    • (2011) Pediatr Infect Dis J , vol.30 , pp. 11-18
    • Vu, H.T.1    Yoshida, L.M.2    Suzuki, M.3    Nguyen, H.A.4    Nguyen, C.D.5    Nguyen, A.T.6    Oishi, K.7    Yamamoto, T.8    Watanabe, K.9
  • 37
    • 33845980586 scopus 로고    scopus 로고
    • Development of a DNA microarray to identify the Streptococcus pneumoniae serotypes contained in the 23-valent pneumococcal polysaccharide vaccine and closely related serotypes
    • Wang, Q., Wang, M., Kong, F., Gilbert, G. L., Cao, B., Wang, L. & Feng, L. (2007). Development of a DNA microarray to identify the Streptococcus pneumoniae serotypes contained in the 23-valent pneumococcal polysaccharide vaccine and closely related serotypes. J Microbiol Methods 68, 128-136.
    • (2007) J Microbiol Methods , vol.68 , pp. 128-136
    • Wang, Q.1    Wang, M.2    Kong, F.3    Gilbert, G.L.4    Cao, B.5    Wang, L.6    Feng, L.7
  • 39
    • 80054093790 scopus 로고    scopus 로고
    • Serotype replacement in disease after pneumococcal vaccination
    • Weinberger, D.M., Malley, R. & Lipsitch, M. (2011). Serotype replacement in disease after pneumococcal vaccination. Lancet 378, 1962-1973.
    • (2011) Lancet , vol.378 , pp. 1962-1973
    • Weinberger, D.M.1    Malley, R.2    Lipsitch, M.3
  • 40
    • 78049523855 scopus 로고    scopus 로고
    • WHO, Changing epidemiology of pneumococcal serotypes after introduction of conjugate vaccine: July 2010 report
    • WHO (2010). Changing epidemiology of pneumococcal serotypes after introduction of conjugate vaccine: July 2010 report. Wkly Epidemiol Rec 85, 434-436.
    • (2010) Wkly Epidemiol Rec , vol.85 , pp. 434-436
  • 41
    • 84897902266 scopus 로고    scopus 로고
    • Measuring impact of Streptococcus pneumoniae and Haemophilus influenzae type b conjugate vaccination
    • WHO, Vaccines and Biologicals WHO/IVB/12.08
    • WHO (2012). Measuring impact of Streptococcus pneumoniae and Haemophilus influenzae type b conjugate vaccination. Immunization, Vaccines and Biologicals WHO/IVB/12.08. http://www.who.int/ immunization/documents/WHO_IVB_12.08/en/
    • (2012) Immunization
  • 43
    • 11844301633 scopus 로고    scopus 로고
    • Rapid multiplex assay for serotyping pneumococci with monoclonal and polyclonal antibodies
    • Yu, J., Lin, J., Benjamin, W. H., Jr, Waites, K. B., Lee, C. H. & Nahm, M. H. (2005). Rapid multiplex assay for serotyping pneumococci with monoclonal and polyclonal antibodies. J Clin Microbiol 43, 156-162.
    • (2005) J Clin Microbiol , vol.43 , pp. 156-162
    • Yu, J.1    Lin, J.2    Benjamin Jr., W.H.3    Waites, K.B.4    Lee, C.H.5    Nahm, M.H.6


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