메뉴 건너뛰기




Volumn 6, Issue 2, 2014, Pages 125-130

Long-term manure exposure increases soil bacterial community potential for plasmid uptake

Author keywords

[No Author keywords available]

Indexed keywords

AGRICULTURAL CHEMICAL;

EID: 84897671509     PISSN: None     EISSN: 17582229     Source Type: Journal    
DOI: 10.1111/1758-2229.12138     Document Type: Article
Times cited : (56)

References (29)
  • 1
    • 33746290731 scopus 로고    scopus 로고
    • Effect of tetracycline residues in pig manure slurry on tetracycline-resistant bacteria and resistance gene tet(M) in soil microcosms
    • Agersø, Y., Wulff, G., Vaclavik, E., Halling-Sørensen, B., and Jensen, L.B. (2006) Effect of tetracycline residues in pig manure slurry on tetracycline-resistant bacteria and resistance gene tet(M) in soil microcosms. Environ Int 32: 876-882.
    • (2006) Environ Int , vol.32 , pp. 876-882
    • Agersø, Y.1    Wulff, G.2    Vaclavik, E.3    Halling-Sørensen, B.4    Jensen, L.B.5
  • 2
    • 0019805971 scopus 로고
    • Specific-purpose plasmid cloning vectors II. Broad host range, high copy number, RSF 1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas
    • Bagdasarian, M., Lurz, R., Rückert, B., Franklin, F.C.H., Bagdasarian, M.M., Frey, J., and Timmis, K.N. (1981) Specific-purpose plasmid cloning vectors II. Broad host range, high copy number, RSF 1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene 16: 237-247.
    • (1981) Gene , vol.16 , pp. 237-247
    • Bagdasarian, M.1    Lurz, R.2    Rückert, B.3    Franklin, F.C.H.4    Bagdasarian, M.M.5    Frey, J.6    Timmis, K.N.7
  • 3
    • 0017710994 scopus 로고
    • Map of plasmid RP4 derived by insertion of transposon C
    • Barth, P.T., and Grinter, N.J. (1977) Map of plasmid RP4 derived by insertion of transposon C. J Mol Biol 113: 455-474.
    • (1977) J Mol Biol , vol.113 , pp. 455-474
    • Barth, P.T.1    Grinter, N.J.2
  • 5
    • 0344333449 scopus 로고    scopus 로고
    • Isolation, characterization, and transfer of cryptic gene-mobilizing plasmids in the wheat rhizosphere
    • van Elsas, J.D., McSpadden Gardener, B.B., Wolters, A.C., and Smit, E. (1998) Isolation, characterization, and transfer of cryptic gene-mobilizing plasmids in the wheat rhizosphere. Appl Environ Microbiol 64: 880-889.
    • (1998) Appl Environ Microbiol , vol.64 , pp. 880-889
    • van Elsas, J.D.1    McSpadden Gardener, B.B.2    Wolters, A.C.3    Smit, E.4
  • 6
    • 0037341758 scopus 로고    scopus 로고
    • Horizontal gene transfer in the phytosphere
    • van Elsas, J.D., Turner, S., and Bailey, M.J. (2003) Horizontal gene transfer in the phytosphere. New Phytol 157: 525-537.
    • (2003) New Phytol , vol.157 , pp. 525-537
    • van Elsas, J.D.1    Turner, S.2    Bailey, M.J.3
  • 7
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data
    • Excoffier, L., Smouse, P.E., and Quattro, J.M. (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 8
    • 0030613377 scopus 로고    scopus 로고
    • Manure enhances plasmid mobilization and survival of Pseudomonas putida introduced into field soil
    • Götz, A., and Smalla, K. (1997) Manure enhances plasmid mobilization and survival of Pseudomonas putida introduced into field soil. Appl Environ Microbiol 63: 1980-1986.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 1980-1986
    • Götz, A.1    Smalla, K.2
  • 9
    • 0024546349 scopus 로고
    • Phenoxyacetic acid degradation by the 2,4-dichlorophenoxyacetic acid (TFD) pathway of plasmid pJP4: mapping and characterization of the TFD regulatory gene, tfdR
    • Harker, A.R., Olsen, R.H., and Seidler, R.J. (1989) Phenoxyacetic acid degradation by the 2, 4-dichlorophenoxyacetic acid (TFD) pathway of plasmid pJP4: mapping and characterization of the TFD regulatory gene, tfdR. J Bacteriol 171: 314-320.
    • (1989) J Bacteriol , vol.171 , pp. 314-320
    • Harker, A.R.1    Olsen, R.H.2    Seidler, R.J.3
  • 10
    • 84866919992 scopus 로고    scopus 로고
    • Plasmids foster diversification and adaptation of bacterial populations in soil
    • Heuer, H., and Smalla, K. (2012) Plasmids foster diversification and adaptation of bacterial populations in soil. FEMS Microbiol Rev 36: 1083-1104.
    • (2012) FEMS Microbiol Rev , vol.36 , pp. 1083-1104
    • Heuer, H.1    Smalla, K.2
  • 11
    • 49249097625 scopus 로고    scopus 로고
    • Patchy distribution of flexible genetic elements in bacterial populations mediates robustness to environmental uncertainty
    • Heuer, H., Abdo, Z., and Smalla, K. (2008) Patchy distribution of flexible genetic elements in bacterial populations mediates robustness to environmental uncertainty. FEMS Microbiol Ecol 65: 361-371.
    • (2008) FEMS Microbiol Ecol , vol.65 , pp. 361-371
    • Heuer, H.1    Abdo, Z.2    Smalla, K.3
  • 12
    • 77953221161 scopus 로고    scopus 로고
    • Variation in permissiveness for broad-host-range plasmids among genetically indistinguishable isolates of Dickeya sp. from a small field plot
    • Heuer, H., Ebers, J., Weinert, N., and Smalla, K. (2010) Variation in permissiveness for broad-host-range plasmids among genetically indistinguishable isolates of Dickeya sp. from a small field plot. FEMS Microbiol Ecol 73: 190-196.
    • (2010) FEMS Microbiol Ecol , vol.73 , pp. 190-196
    • Heuer, H.1    Ebers, J.2    Weinert, N.3    Smalla, K.4
  • 13
    • 79959306747 scopus 로고    scopus 로고
    • Antibiotic resistance gene spread due to manure application on agricultural fields
    • Heuer, H., Schmitt, H., and Smalla, K. (2011) Antibiotic resistance gene spread due to manure application on agricultural fields. Curr Opin Microbiol 14: 236-243.
    • (2011) Curr Opin Microbiol , vol.14 , pp. 236-243
    • Heuer, H.1    Schmitt, H.2    Smalla, K.3
  • 14
    • 65249138935 scopus 로고    scopus 로고
    • Establishment of a long-term field trial with urban fertilizers
    • ISOFAR Scientific Series. Bruun, S., Raupp, J., Pekrun, C., Oltmanns, M., and Köpke, U. (eds). Bonn, Germany: Verlag Dr. H. J. Köster.
    • Magid, J., Luxhøi, J., Jensen, L.S., and Møller, J. (2006) Establishment of a long-term field trial with urban fertilizers. In Is recycling of nutrients from urban areas to peri-urban organic farms feasible? ISOFAR Scientific Series. Bruun, S., Raupp, J., Pekrun, C., Oltmanns, M., and Köpke, U. (eds). Bonn, Germany: Verlag Dr. H. J. Köster, pp. 59-78.
    • (2006) Is recycling of nutrients from urban areas to peri-urban organic farms feasible? , pp. 59-78
    • Magid, J.1    Luxhøi, J.2    Jensen, L.S.3    Møller, J.4
  • 15
    • 84884239313 scopus 로고    scopus 로고
    • The impact of manure fertilization on the abundance of antibiotic-resistant bacteria and frequency of detection of antibiotic resistance genes in soil, and on vegetables at harvest
    • AEM.01682-13
    • Marti, R., Scott, A., Tien, Y.-C., Murray, R., Sabourin, L., Zhang, Y., and Topp, E. (2013) The impact of manure fertilization on the abundance of antibiotic-resistant bacteria and frequency of detection of antibiotic resistance genes in soil, and on vegetables at harvest. Appl Environ Microbiol 79: 5701-5709. AEM.01682-13.
    • (2013) Appl Environ Microbiol , vol.79 , pp. 5701-5709
    • Marti, R.1    Scott, A.2    Tien, Y.-C.3    Murray, R.4    Sabourin, L.5    Zhang, Y.6    Topp, E.7
  • 16
    • 77954745754 scopus 로고    scopus 로고
    • Novel assay to assess permissiveness of a soil microbial community toward receipt of mobile genetic elements
    • Musovic, S., Dechesne, A., Sørensen, J., and Smets, B.F. (2010) Novel assay to assess permissiveness of a soil microbial community toward receipt of mobile genetic elements. Appl Environ Microbiol 76: 4813-4818.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 4813-4818
    • Musovic, S.1    Dechesne, A.2    Sørensen, J.3    Smets, B.F.4
  • 17
    • 0036202173 scopus 로고    scopus 로고
    • Dispersal of plasmid pJP4 in unsaturated and saturated 2,4-dichlorophenoxyacetic acid contaminated soil
    • Newby, D.T., and Pepper, I.L. (2002) Dispersal of plasmid pJP4 in unsaturated and saturated 2, 4-dichlorophenoxyacetic acid contaminated soil. FEMS Microbiol Ecol 39: 157-164.
    • (2002) FEMS Microbiol Ecol , vol.39 , pp. 157-164
    • Newby, D.T.1    Pepper, I.L.2
  • 18
    • 0032906540 scopus 로고    scopus 로고
    • Heavy metal contents of livestock feeds and animal manures in England and Wales
    • Nicholson, F., Chambers, B., Williams, J., and Unwin, R. (1999) Heavy metal contents of livestock feeds and animal manures in England and Wales. Bioresour Technol 70: 23-31.
    • (1999) Bioresour Technol , vol.70 , pp. 23-31
    • Nicholson, F.1    Chambers, B.2    Williams, J.3    Unwin, R.4
  • 19
    • 0035118587 scopus 로고    scopus 로고
    • Stimulatory effects of compounds present in the rhizosphere on natural transformation of Acinetobacter sp. BD413 in soil
    • Nielsen, K., and van Elsas, J. (2001) Stimulatory effects of compounds present in the rhizosphere on natural transformation of Acinetobacter sp. BD413 in soil. Soil Biol Biochem 33: 345-357.
    • (2001) Soil Biol Biochem , vol.33 , pp. 345-357
    • Nielsen, K.1    van Elsas, J.2
  • 20
    • 84873278726 scopus 로고    scopus 로고
    • Effects of fertilization with urban and agricultural organic wastes in a field trial - prokaryotic diversity investigated by pyrosequencing
    • Poulsen, P.H.B., Al-Soud, W.A., Bergmark, L., Magid, J., Hansen, L.H., and Sørensen, S.J. (2013a) Effects of fertilization with urban and agricultural organic wastes in a field trial - prokaryotic diversity investigated by pyrosequencing. Soil Biol Biochem 57: 784-793.
    • (2013) Soil Biol Biochem , vol.57 , pp. 784-793
    • Poulsen, P.H.B.1    Al-Soud, W.A.2    Bergmark, L.3    Magid, J.4    Hansen, L.H.5    Sørensen, S.J.6
  • 21
    • 84873292275 scopus 로고    scopus 로고
    • Effects of fertilization with urban and agricultural organic wastes in a field trial - waste imprint on soil microbial activity
    • Poulsen, P.H.B., Magid, J., Luxhøi, J., and de Neergaard, A. (2013b) Effects of fertilization with urban and agricultural organic wastes in a field trial - waste imprint on soil microbial activity. Soil Biol Biochem 57: 794-802.
    • (2013) Soil Biol Biochem , vol.57 , pp. 794-802
    • Poulsen, P.H.B.1    Magid, J.2    Luxhøi, J.3    de Neergaard, A.4
  • 22
    • 84873739311 scopus 로고    scopus 로고
    • The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
    • Quast, C., Pruesse, E., Yilmaz, P., Gerken, J., Schweer, T., Yarza, P., etal. (2013) The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res 41: D590-D596.
    • (2013) Nucleic Acids Res , vol.41
    • Quast, C.1    Pruesse, E.2    Yilmaz, P.3    Gerken, J.4    Schweer, T.5    Yarza, P.6
  • 23
    • 72949107142 scopus 로고    scopus 로고
    • Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
    • Schloss, P.D., Westcott, S.L., Ryabin, T., Hall, J.R., Hartmann, M., Hollister, E.B., etal. (2009) Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75: 7537-7541.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 7537-7541
    • Schloss, P.D.1    Westcott, S.L.2    Ryabin, T.3    Hall, J.R.4    Hartmann, M.5    Hollister, E.B.6
  • 25
    • 0029142616 scopus 로고
    • Quantification of the effect of substrate concentration on the conjugal transfer rate of the TOL plasmid in short-term batch mating experiments
    • Smets, B.F., Rittmann, B.E., and Stahl, D.A. (1995) Quantification of the effect of substrate concentration on the conjugal transfer rate of the TOL plasmid in short-term batch mating experiments. Lett Appl Microbiol 21: 167-172.
    • (1995) Lett Appl Microbiol , vol.21 , pp. 167-172
    • Smets, B.F.1    Rittmann, B.E.2    Stahl, D.A.3
  • 27
    • 0035987241 scopus 로고    scopus 로고
    • The complete nucleotide sequence and environmental distribution of the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from bacteria of the wheat rhizosphere
    • Tauch, A., Schneiker, S., Selbitschka, W., Puhler, A., van Overbeek, L.S., Smalla, K., etal. (2002) The complete nucleotide sequence and environmental distribution of the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from bacteria of the wheat rhizosphere. Microbiology 18: 1637-1653.
    • (2002) Microbiology , vol.18 , pp. 1637-1653
    • Tauch, A.1    Schneiker, S.2    Selbitschka, W.3    Puhler, A.4    van Overbeek, L.S.5    Smalla, K.6
  • 28
    • 23944475626 scopus 로고    scopus 로고
    • Mechanisms of, and barriers to, horizontal gene transfer between bacteria
    • Thomas, C.M., and Nielsen, K.M. (2005) Mechanisms of, and barriers to, horizontal gene transfer between bacteria. Nat Rev Microbiol 3: 711-721.
    • (2005) Nat Rev Microbiol , vol.3 , pp. 711-721
    • Thomas, C.M.1    Nielsen, K.M.2
  • 29
    • 84861154288 scopus 로고    scopus 로고
    • Detection of a common and persistent tet(L)-carrying plasmid in chicken-waste-impacted farm soil
    • You, Y., Hilpert, M., and Ward, M.J. (2012) Detection of a common and persistent tet(L)-carrying plasmid in chicken-waste-impacted farm soil. Appl Environ Microbiol 78: 3203-3213.
    • (2012) Appl Environ Microbiol , vol.78 , pp. 3203-3213
    • You, Y.1    Hilpert, M.2    Ward, M.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.